RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 MtrA6H5Y3 1253 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Samd15F6XZJ7 620 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 AurkbO70126 345 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 HelqQ2VPA6 1069 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ddx10Q80Y44 875 aaKnown RBP12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Chtf18Q8BIW9 969 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Alg1Q921Q3 482 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Zbed3Q9D0L1 228 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Arl2bpQ9D385 163 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Rexo2Q9D8S4 237 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Usp14Q9JMA1 493 aaKnown RBP12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Bend4P86174 541 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Tbc1d9bQ5SVR0 1263 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Klra4Q60651 263 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Rbm26Q6NZN0 1012 aaKnown RBP12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ttc7aQ8BGB2 858 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Armc6Q8BNU0 468 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Vwa5aQ99KC8 793 aaKnown RBP12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Lrp2bpQ9D4C6 346 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Nup188Q6ZQH8 1759 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Dnaaf5B9EJR8 853 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Chrna5Q2MKA5 467 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Rapgef1Q3UHC1 1224 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Mettl14Q3UIK4 456 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Rnpc3Q3UZ01 514 aaKnown RBP12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Dusp19Q8K4T5 220 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 AagabQ8R2R3 316 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 PccaQ91ZA3 724 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 LrmdaQ9D9B4 229 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Lamb1P02469 1786 aa12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Togaram1Q6A070 1776 aaKnown RBP12.61□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ccdc88cQ6VGS5 2009 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 Kcnu1O54982 1121 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 Pgrmc1O55022 195 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 Rbm46P86049 533 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 Rasip1Q3U0S6 961 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 Akap4Q60662 849 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 H6pdQ8CFX1 789 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ddah1Q9CWS0 285 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 BcamQ9R069 622 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 EmcnQ9R0H2 261 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 A0A286YCQ6 122 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 Zfp984A2A7A2 547 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 Cetn3O35648 167 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 Phf8Q80TJ7 1023 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 Haus1Q8BHX1 278 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 Yars2Q8BYL4 472 aaKnown RBP12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 Tsnaxip1Q99P25 704 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 KynuQ9CXF0 464 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 Xirp1O70373 1129 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 Vcam1P29533 739 aa12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 Spout1Q3UHX9 385 aaKnown RBP12.6□□□□□ -0.39
Vps54-202ENSMUST00000109578 Mroh9G5E8L9 891 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 UncxO08934 530 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 AdkP55264 361 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Mcl1P97287 331 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Nhej1Q3KNJ2 295 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Gdpd4Q3TT99 632 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Acbd5Q5XG73 508 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Znf18Q810A1 556 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ttc22Q8C159 568 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Scyl2Q8CFE4 930 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Trap1Q9CQN1 706 aaKnown RBP12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Hyou1Q9JKR6 999 aaKnown RBP12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Polr2fP61219 127 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Fam107bQ3TGF2 131 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Tmprss11aQ3UQ41 389 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Asap3Q5U464 904 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Fnbp1Q80TY0 616 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ift74Q8BKE9 600 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Drd5Q8BLD9 478 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Usp38Q8BW70 1042 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Sumf1Q8R0F3 372 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Bhmt2Q91WS4 363 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Atp6v0a2P15920 856 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Rps6ka1P18653 724 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Serpinc1P32261 465 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Trip13Q3UA06 432 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Krt35Q497I4 455 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Hoxa13Q62424 386 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Krt9Q6RHW0 743 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Def6Q8C2K1 630 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Spats2Q8K1N4 545 aaKnown RBP12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Il17cQ8K4C5 194 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Slc26a4Q9R155 780 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ankrd2Q9WV06 328 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Apol10bG3X9K7 334 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Sema4dO09126 861 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Cpsf2O35218 782 aaKnown RBP12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Zc3h18Q0P678 948 aaKnown RBP12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Lrrcc1Q69ZB0 1026 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Baiap3Q80TT2 1134 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Pak2Q8CIN4 524 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Afg3l2Q8JZQ2 802 aaKnown RBP12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Atxn7Q8R4I1 867 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Ndufab1Q9CR21 156 aa12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Pacsin2Q9WVE8 486 aaKnown RBP12.59□□□□□ -0.39
Vps54-202ENSMUST00000109578 Pitpnm2Q6ZPQ6 1335 aa12.58□□□□□ -0.39
Vps54-202ENSMUST00000109578 Nr1i3O35627 358 aa12.58□□□□□ -0.4
Vps54-202ENSMUST00000109578 Ap1b1O35643 943 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms