RNA–Protein interactions for RNA: ENSMUST00000108908.5

Scn8a-203, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 7,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-203ENSMUST00000108908 Kcnq3Q8K3F6 873 aa11.95□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Ddx25Q9QY15 484 aa11.95□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Zfp94E9Q6Y4 486 aa11.95□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Ces5aQ6AW46 575 aa11.95□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Zbed4Q80WQ9 1168 aa11.95□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Ces1dQ8VCT4 565 aa11.95□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Olfr390Q8VEZ7 311 aa11.95□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Kctd16Q5DTY9 427 aa11.95□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Fam49aQ8BHZ0 323 aa11.95□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Ybx3Q9JKB3 361 aaKnown RBP11.95□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Fam167bP17257 162 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Dpcr1Q3TNW5 500 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Zfyve27Q3TXX3 415 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Carmil2Q3V3V9 1296 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Clec16aQ80U30 1036 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Syap1Q9D5V6 365 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 MajinQ9D992 256 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Tnfrsf10bQ9QZM4 381 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Vmn2r23E9PXI5 849 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Edem3Q2HXL6 931 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Q6PD19 689 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Pdzph1Q8BGR1 1238 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Apopt1Q9CQW7 192 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Thap2Q9D305 217 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Ifi35Q9D8C4 286 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Prr18Q6PAN7 307 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Akap7Q7TN79 314 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Sept10Q8C650 452 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 LgsnQ8CIX8 563 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Lman1lQ8VCD3 505 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Abcg3Q99P81 650 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Bcs1lQ9CZP5 418 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Aldh18a1Q9Z110 795 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Kat6bQ8BRB7 1872 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Flt4P35917 1363 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Arhgef7Q9ES28 862 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Tnni1Q9WUZ5 187 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Uhrf1bp1B2KF50 1429 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Ccdc24E9PUW8 296 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Heatr4E9Q357 955 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Nab2Q61127 525 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Stxbp2Q64324 593 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Dpp9Q8BVG4 862 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Wbp11Q923D5 641 aaKnown RBP11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Med15Q924H2 789 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Rnf112Q96DY5 654 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Slc12a7Q9WVL3 1083 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Ttc38A3KMP2 465 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Kcnk16G5E845 292 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Vmn2r78K7N6U5 853 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Ppp1r7Q3UM45 361 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Psen2Q61144 448 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 HdlbpQ8VDJ3 1268 aaKnown RBP11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 MefvQ9JJ26 767 aa11.94□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Gm5936A2BG95 728 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Gm5640A3KG49 728 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Ppfia4B8QI36 1187 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Gm28043E0CXC2 719 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Setd4P58467 439 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 MlxipQ2VPU4 917 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Rsad1Q5SUV1 442 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Efcab8Q8C9R9 203 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Rnaseh2aQ9CWY8 301 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 LtkP08923 888 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Cdh15P33146 784 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Cnga4Q3UW12 575 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Vmn1r209Q5NC97 312 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Samhd1Q60710 627 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Sin3bQ62141 1098 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Ncoa7Q6DFV7 943 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 EngaseQ8BX80 734 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Ubxn8Q9QZ49 277 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Acad12D3Z7X0 555 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Krt90E9Q1Z0 538 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Nr1d1Q3UV55 615 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Slc26a6Q8CIW6 758 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Gkap1Q9JMB0 366 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Arhgap4B1AUY3 965 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Stag2O35638 1231 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Cyp2e1Q05421 493 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Baiap3Q80TT2 1134 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Dars2Q8BIP0 653 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Fbxo18Q8K2I9 1042 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Dbndd2Q9CRD4 158 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 SarnpQ9D1J3 210 aaKnown RBP11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Arhgap33Q80YF9 1305 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Atp10bB1AWN4 1474 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Gm7356A0A087WSA6 508 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Serpinb6eI7HJI3 429 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 IkbkgO88522 412 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Taf1bP97358 586 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Cep85Q8BMK0 761 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Cabcoco1Q8CDT7 208 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Afg3l2Q8JZQ2 802 aaKnown RBP11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Kiaa0319lQ8K135 1048 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Gga1Q8R0H9 635 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Rpa3Q9CQ71 121 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Ankrd2Q9WV06 328 aa11.93□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Cyp11b1Q3TG86 501 aa11.92□□□□□ -0.5
Scn8a-203ENSMUST00000108908 Slc2a13Q3UHK1 637 aa11.92□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms