RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 MycP01108 439 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Trpc6Q61143 930 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Naa35Q6PHQ8 725 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Usp20Q8C6M1 916 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Pcdhb12Q91Y07 789 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Dqx1Q924H9 718 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 NptxrQ99J85 493 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Gm45194A0A140LJG2 572 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Krt36B1AQ75 473 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Slc16a2O70324 545 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Eif3j1Q3UGC7 261 aaKnown RBP11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Vwa3aQ3UVV9 1148 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Csgalnact2Q8C1F4 542 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Ddx41Q91VN6 622 aaKnown RBP11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 YwhabQ9CQV8 246 aaKnown RBP11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Tbx20Q9ES03 445 aa11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 PhipQ8VDD9 1821 aaKnown RBP11.05□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Tff2Q03404 129 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Cep126Q0VBV7 1103 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Kmt5aQ2YDW7 349 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Etaa1Q5SVT3 877 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Foxd1Q61345 456 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 GldcQ91W43 1025 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Ralgps2Q9ERD6 590 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Chaf1aQ9QWF0 911 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Extl3Q9WVL6 918 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Psmc5P62196 406 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Ces1eQ64176 562 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Gigyf2Q6Y7W8 1291 aaKnown RBP11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Ranbp17Q99NF8 1088 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Myl7Q9QVP4 175 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Hic1Q9R1Y5 733 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 GsdmeQ9Z2D3 512 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Got1P05201 413 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Ahcyl2Q68FL4 613 aaKnown RBP11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Pstpip2Q99M15 334 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Haus2Q9CQS9 234 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Mkrn1Q9QXP6 481 aa11.04□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Gm5624F6ZZG8 207 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Mtco1P00397 514 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 P4hbP09103 509 aaKnown RBP11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 PrkceP16054 737 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Phka1P18826 1241 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 CtcfQ61164 736 aaKnown RBP11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Apol10aQ8CCA5 318 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Ppp1r16bQ8VHQ3 568 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Pqbp1Q91VJ5 263 aaKnown RBP11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Sorbs3Q9R1Z8 733 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Sbf2E9PXF8 1872 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Astn1Q61137 1302 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Il2rbP16297 539 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Man1a2P39098 641 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Col9a2Q07643 688 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Nt5c2Q3V1L4 560 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Vmn1r191Q8K4D0 298 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Fgd4Q91ZT5 766 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Tas1r1Q99PG6 842 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Mis18aQ9CZJ6 204 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Dnajc18Q9CZJ9 357 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Prl2c5Q9JLV9 222 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 PolkQ9QUG2 852 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Timm44O35857 452 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Abcb4P21440 1276 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Cntnap5bQ0V8T8 1292 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Gm3414Q3TNU4 584 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Slc9a2Q3ZAS0 814 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Krt14Q61781 484 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Ppp1r13bQ62415 1087 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Jade2Q6ZQF7 829 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Cwf19l2Q8BG79 887 aaKnown RBP11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Znf445Q8R2V3 986 aa11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Pkp2Q9CQ73 795 aaKnown RBP11.03□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Dnajc25A2ALW5 357 aa11.02□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 PklrP53657 574 aa11.02□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Foxn3Q499D0 457 aa11.02□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Mybpc2Q5XKE0 1136 aa11.02□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Cyp2c29Q64458 490 aa11.02□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Nsun6Q7TS68 476 aa11.02□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Sun2Q8BJS4 731 aa11.02□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Nrbp2Q91V36 499 aa11.02□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Cnpy2Q9QXT0 182 aa11.02□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Eya4Q9Z191 616 aa11.02□□□□□ -0.64
Ccdc38-201ENSMUST00000092215 Herc3A6H6S0 1050 aa11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Ddx23D3Z0M9 819 aaKnown RBP11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Zkscan7E9PVW1 718 aa11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Stim1P70302 685 aa11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Gtf3c3Q3TMP1 882 aa11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Fkbp3Q62446 224 aaKnown RBP11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Slc17a8Q8BFU8 601 aa11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Pcdhac2Q91Y09 1006 aa11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Bpifb4A2BGH0 617 aa11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 AurkbO70126 345 aa11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Lta4hP24527 611 aa11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Ly9Q01965 654 aa11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Ddr2Q62371 854 aa11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Ces5aQ6AW46 575 aa11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Taok2Q6ZQ29 1240 aa11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Igdcc3Q8BQC3 813 aa11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Q8BZJ8 459 aa11.02□□□□□ -0.65
Ccdc38-201ENSMUST00000092215 Olfr397Q8VEZ6 315 aa11.02□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 26.1 ms