RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 Zfyve19Q9DAZ9 389 aa12.52□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Atad5Q4QY64 1826 aa12.51□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 GnaqP21279 359 aa12.51□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Traf3ip1Q149C2 625 aa12.51□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Kank4Q6P9J5 1016 aa12.51□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Ccp110Q7TSH4 1004 aa12.51□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 AarsQ8BGQ7 968 aa12.51□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Yars2Q8BYL4 472 aaKnown RBP12.51□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Zfp120Q8BZW4 436 aa12.51□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 SltmQ8CH25 1031 aaKnown RBP12.51□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Plagl2Q925T4 496 aa12.51□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Tmem191cQ9JJB1 302 aa12.51□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 3110082J24RikF6Z6Z2 108 aa12.5□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 GlulP15105 373 aa12.5□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 FasP25446 327 aa12.5□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 1700013D24RikQ0P521 120 aa12.5□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Gpatch11Q3UFS4 262 aa12.5□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Tmtc2Q56A06 836 aa12.5□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Smarcc2Q6PDG5 1213 aa12.5□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Nr1h3Q9Z0Y9 445 aa12.5□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Plxna1P70206 1894 aa12.5□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Lipo1J3QME6 396 aa12.5□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Mboat4P0C7A3 435 aa12.5□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Mfsd14aP70187 490 aa12.5□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Echdc2Q3TLP5 296 aa12.5□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Icam5Q60625 917 aa12.5□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 F13a1Q8BH61 732 aa12.5□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Rrp9Q91WM3 475 aaKnown RBP12.5□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Homer1Q9Z2Y3 366 aa12.5□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Usp42B2RQC2 1324 aaKnown RBP12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Gm6133B2RY53 190 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Xpnpep3B7ZMP1 506 aaKnown RBP12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Mtco1P00397 514 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Mtx1P47802 317 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Armc2Q3URY6 854 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Jakmip3Q5DTN8 844 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 ErmnQ5EBJ4 281 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 SkilQ60665 675 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Grik4Q8BMF5 956 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Grb14Q9JLM9 538 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Ppfia1B2RXQ2 1266 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Gucy1a2F8VQK3 730 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Angpt1O08538 498 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Nfil3O08750 462 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Camk4P08414 469 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Pgk1P09411 417 aaKnown RBP12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Cdca2Q14B71 982 aaKnown RBP12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 ChpfQ6IQX7 774 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Rassf8Q8CJ96 419 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Dnajc18Q9CZJ9 357 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 WtapQ9ER69 396 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 C1qtnf1Q9QXP7 281 aa12.49□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Tmem131O70472 1877 aa12.48□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Dnajc2P54103 621 aaKnown RBP12.48□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Gdf10P97737 476 aa12.48□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Q5XFZ0 217 aa12.48□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Arhgef2Q60875 985 aa12.48□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 C6.1alQ7M757 291 aa12.48□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Q8BHR8 331 aa12.48□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Cdan1Q8CC12 1239 aa12.48□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Rbm19Q8R3C6 952 aaKnown RBP12.48□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Prmt7Q922X9 692 aa12.48□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Mipol1Q9D9F8 279 aa12.48□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Q9DAQ4 598 aa12.48□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Cntnap5cQ0V8T7 1305 aa12.48□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Nup210Q9QY81 1886 aaKnown RBP12.48□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Prl7a2O54831 253 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Pde6bP23440 856 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Ces1eQ64176 562 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Proser3Q7TSA6 634 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Hps6Q8BLY7 805 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Paf1Q8K2T8 535 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Q9CYI0 393 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Armc9Q9D2I5 817 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Odf2lQ9D478 642 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Rbp7Q9EPC5 134 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Trip11E9Q512 1976 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Zfp651E9PZ11 729 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Gm10436L7N1Y3 520 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Nedd1P33215 660 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Prdm1Q60636 856 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Gpr153Q8K0Z9 631 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Adgrg3Q8R0T6 542 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 QpctQ9CYK2 362 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Vmn1r65Q9EPS7 332 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Wfdc1Q9ESH5 211 aa12.47□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Calm1P0DP26 149 aaKnown RBP12.46□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Calm2P0DP27 149 aaKnown RBP12.46□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Calm3P0DP28 149 aaKnown RBP12.46□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 SarsP26638 512 aaKnown RBP12.46□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Fmr1P35922 614 aaKnown RBP12.46□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Gbp1Q01514 589 aa12.46□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Myl10Q62082 202 aa12.46□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Casc1Q6TDU8 730 aa12.46□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Anapc4Q91W96 807 aa12.46□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Map4k3Q99JP0 894 aa12.46□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Prkrip1Q9CWV6 186 aaKnown RBP12.46□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 VasnQ9CZT5 673 aa12.46□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Galntl5Q9D4M9 431 aa12.46□□□□□ -0.41
Ccdc60-202ENSMUST00000086483 Drc3Q9D5E4 523 aa12.46□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 21.5 ms