RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Prl2c2P04095 224 aa12.46□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Nedd1P33215 660 aa12.46□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Ric8aQ3TIR3 530 aa12.46□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Pls1Q3V0K9 630 aa12.46□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Tesk2Q8VCT9 570 aa12.46□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Creld2Q9CYA0 350 aa12.46□□□□□ -0.41
Ddx55-201ENSMUST00000071057 4921524L21RikQ9D5T2 438 aa12.46□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Serpinb12Q9D7P9 423 aa12.46□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Txnrd2Q9JLT4 524 aa12.46□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Ppp2r3dQ9Z176 491 aa12.46□□□□□ -0.41
Ddx55-201ENSMUST00000071057 Psme4Q5SSW2 1843 aa12.46□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Spocd1B1ASB6 936 aa12.46□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Gm10378F6XQQ1 160 aa12.46□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Pola2P33611 600 aa12.46□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Uri1Q3TLD5 531 aa12.46□□□□□ -0.42
Ddx55-201ENSMUST00000071057 D630036H23RikQ3UQD6 204 aa12.46□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Meis1Q60954 390 aa12.46□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Gbp4Q61107 620 aa12.46□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Adgrg6Q6F3F9 1165 aa12.46□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Gm2163Q6PCY5 473 aa12.46□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ddx42Q810A7 929 aaKnown RBP12.46□□□□□ -0.42
Ddx55-201ENSMUST00000071057 OscarQ8VBT3 265 aa12.46□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Gmcl1Q920G9 524 aa12.46□□□□□ -0.42
Ddx55-201ENSMUST00000071057 CactinQ9CS00 772 aaKnown RBP12.46□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Syap1Q9D5V6 365 aa12.46□□□□□ -0.42
Ddx55-201ENSMUST00000071057 March8Q9DBD2 286 aa12.46□□□□□ -0.42
Ddx55-201ENSMUST00000071057 ArcQ9WV31 396 aa12.46□□□□□ -0.42
Ddx55-201ENSMUST00000071057 PfasQ5SUR0 1337 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Prss51A0A286YDY8 319 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ttll3A4Q9E5 927 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Etnk2A7MCT6 385 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Gm28042B7ZCM9 1014 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Rfpl4bJ3QPR6 266 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Rad23aP54726 363 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Fam107bQ3TGF2 131 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Rexo1Q7TT28 1213 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Epn1Q80VP1 575 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 GopcQ8BH60 463 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Dcaf8Q8N7N5 591 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Fam76aQ922G2 307 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Glrx3Q9CQM9 337 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Apopt1Q9CQW7 192 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Josd2Q9CR30 188 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Syce1Q9D495 329 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Acot3Q9QYR7 432 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Pdcd6ipQ9WU78 869 aaKnown RBP12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Frmpd3A0A140LIW3 1774 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Usp17ldG5E8G2 545 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Usp17lcG5E8I7 545 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Lire1P11260 357 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Akr1b1P45376 316 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Siah1bQ06985 282 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Zfp781Q0P5U5 243 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Rexo4Q6PAQ4 432 aaKnown RBP12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 ErfeQ6PGN1 340 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Eif4bQ8BGD9 611 aaKnown RBP12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Bst2Q8R2Q8 172 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Tdrd3Q91W18 743 aaKnown RBP12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 F11Q91Y47 624 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Hdac9Q99N13 588 aa12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ino80bQ99PT3 375 aaKnown RBP12.45□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Otud7bB2RUR8 840 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 B020004C17RikJ3QP07 232 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Pcdha4O88689 947 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ptk2P34152 1090 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Krt86P97861 486 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Xxylt1Q3U4G3 392 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Rgl1Q60695 768 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Nlrp4eQ66X19 978 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ctdp1Q7TSG2 960 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ttc7aQ8BGB2 858 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Rab11fip4Q8BQP8 635 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Commd10Q8JZY2 202 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ccdc92Q8VDN4 314 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Fam217aQ9D9W6 419 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Tbx18Q9EPZ6 613 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 BcamQ9R069 622 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Gm5737A0A140LI11 423 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Zc3h7bF8VPP8 982 aaKnown RBP12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Dnm2P39054 870 aaKnown RBP12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Psmc2P46471 433 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Cdc25aP48964 514 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Psmc6P62334 389 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Mettl14Q3UIK4 456 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Sp4Q62445 782 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Fbxo28Q8BIG4 368 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Fam53cQ8BXQ8 393 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ppm1fQ8CGA0 452 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 CutaQ9CQ89 177 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ears2Q9CXJ1 523 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Tubb4aQ9D6F9 444 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Tube1Q9D6T1 475 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 ChmQ9QXG2 665 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Vav3Q9R0C8 847 aa12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Zswim8Q3UHH1 1832 aaKnown RBP12.44□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Ppfia4B8QI36 1187 aa12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Mroh8E9PYI4 1049 aa12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 AfpP02772 605 aa12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 RaraP11416 462 aa12.43□□□□□ -0.42
Ddx55-201ENSMUST00000071057 Sfi1Q3UZY0 1216 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 20 ms