RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 D1Pas1P16381 660 aa11.3□□□□□ -0.6
Trim17-201ENSMUST00000047697 Rpusd2Q149F1 553 aa11.3□□□□□ -0.6
Trim17-201ENSMUST00000047697 Asap3Q5U464 904 aa11.3□□□□□ -0.6
Trim17-201ENSMUST00000047697 Sh3gl2Q62420 352 aa11.3□□□□□ -0.6
Trim17-201ENSMUST00000047697 Hdac10Q6P3E7 666 aa11.3□□□□□ -0.6
Trim17-201ENSMUST00000047697 Rassf6Q80UQ2 353 aa11.3□□□□□ -0.6
Trim17-201ENSMUST00000047697 Igdcc3Q8BQC3 813 aa11.3□□□□□ -0.6
Trim17-201ENSMUST00000047697 Usp38Q8BW70 1042 aa11.3□□□□□ -0.6
Trim17-201ENSMUST00000047697 Ttc22Q8C159 568 aa11.3□□□□□ -0.6
Trim17-201ENSMUST00000047697 Slc4a8Q8JZR6 1089 aa11.3□□□□□ -0.6
Trim17-201ENSMUST00000047697 Cul5Q9D5V5 780 aa11.3□□□□□ -0.6
Trim17-201ENSMUST00000047697 Hyou1Q9JKR6 999 aaKnown RBP11.3□□□□□ -0.6
Trim17-201ENSMUST00000047697 Gm6121L7MUF1 212 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Sema3fO88632 785 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Fgd3O88842 733 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Map2k1P31938 393 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Stat3P42227 770 aaKnown RBP11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Acsbg2Q2XU92 667 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Pnma5Q5DTT8 618 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Amigo3Q8C2S7 508 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Nup58Q8R332 587 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Vwa5aQ99KC8 793 aaKnown RBP11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Lrrc57Q9D1G5 239 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Ankrd2Q9WV06 328 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Cyfip2Q5SQX6 1253 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Cep104Q80V31 926 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Yars2Q8BYL4 472 aaKnown RBP11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 BlmhQ8R016 455 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Cep19Q9CQA8 163 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Ctnnbl1Q9CWL8 563 aaKnown RBP11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Armc9Q9D2I5 817 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Entpd5Q9WUZ9 427 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Gm2030D3Z7C4 212 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Fam178bQ24JP3 464 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Glra4Q61603 456 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Lilrb4Q64281 335 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 FtoQ8BGW1 502 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 1700018B08RikQ9DA83 213 aa11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Tjp2Q9Z0U1 1167 aaKnown RBP11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 AfdnQ9QZQ1 1820 aaKnown RBP11.29□□□□□ -0.6
Trim17-201ENSMUST00000047697 Bcl9Q9D219 1425 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Ttc38A3KMP2 465 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Atp6v0a2P15920 856 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Snai1Q02085 264 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Kcnma1Q08460 1209 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Tmed8Q3UHI4 326 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Lrrc43Q3V0L5 667 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Brinp3Q499E0 766 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Ccdc92bQ5SUE3 299 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Trpc6Q61143 930 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Pank4Q80YV4 820 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 PolrmtQ8BKF1 1207 aaKnown RBP11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Gimap5Q8BWF2 308 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Naa25Q8BWZ3 972 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Psmd2Q8VDM4 908 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Epb41l3Q9WV92 929 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Ccdc152E9PX14 254 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Vmn2r79E9Q067 851 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Tagap1P0CAX8 505 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 ProcP33587 460 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 BC051142Q3V0M8 400 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Fgfr1opQ66JX5 399 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 TwistnbQ78WZ7 330 aaKnown RBP11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Mxd3Q80US8 206 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Cnot10Q8BH15 744 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Aldh5a1Q8BWF0 523 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 IntS13Q8QZV7 732 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Chn1Q91V57 459 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 PccaQ91ZA3 724 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 RpainQ9CWY9 219 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 GakQ99KY4 1305 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Nav1Q8CH77 1875 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Xirp1O70373 1129 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Ice2Q3UZ18 988 aaKnown RBP11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Kif22Q3V300 660 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Fam196bQ6GQV1 535 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Ppp2r2aQ6P1F6 447 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 AdalQ80SY6 360 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 P3h4Q8K2B0 443 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Kbtbd4Q8R179 534 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 4931423N10RikQ9D4J9 382 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Cul1Q9WTX6 776 aa11.28□□□□□ -0.6
Trim17-201ENSMUST00000047697 Hnrnph3D3Z3N4 346 aaKnown RBP11.27□□□□□ -0.6
Trim17-201ENSMUST00000047697 Ccdc78D3Z5T1 437 aa11.27□□□□□ -0.6
Trim17-201ENSMUST00000047697 Sema4dO09126 861 aa11.27□□□□□ -0.6
Trim17-201ENSMUST00000047697 CraddO88843 199 aa11.27□□□□□ -0.6
Trim17-201ENSMUST00000047697 Krt8P11679 490 aaKnown RBP11.27□□□□□ -0.6
Trim17-201ENSMUST00000047697 Ttbk2Q3UVR3 1243 aa11.27□□□□□ -0.6
Trim17-201ENSMUST00000047697 Kiaa1211Q5PR69 1207 aa11.27□□□□□ -0.6
Trim17-201ENSMUST00000047697 Serpinb1cQ5SV42 375 aa11.27□□□□□ -0.6
Trim17-201ENSMUST00000047697 Tspyl5Q69ZB3 406 aa11.27□□□□□ -0.6
Trim17-201ENSMUST00000047697 Foxo6Q70KY4 559 aa11.27□□□□□ -0.6
Trim17-201ENSMUST00000047697 Q8VDP2 222 aa11.27□□□□□ -0.6
Trim17-201ENSMUST00000047697 RnmtQ9D0L8 465 aaKnown RBP11.27□□□□□ -0.6
Trim17-201ENSMUST00000047697 Ubr2Q6WKZ8 1755 aa11.27□□□□□ -0.61
Trim17-201ENSMUST00000047697 Sh3tc1G3X9F6 1346 aa11.27□□□□□ -0.61
Trim17-201ENSMUST00000047697 Abca15E9PWH4 1668 aa11.27□□□□□ -0.61
Trim17-201ENSMUST00000047697 Vmn2r68L7N2B3 851 aa11.27□□□□□ -0.61
Trim17-201ENSMUST00000047697 Mucl2P02815 138 aa11.27□□□□□ -0.61
Trim17-201ENSMUST00000047697 Chmp6P0C0A3 200 aa11.27□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms