RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 DesP31001 469 aaKnown RBP9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Lrrn4P59383 733 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Sox13Q04891 613 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ccdc84Q4VA36 332 aaKnown RBP9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Shc3Q61120 474 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Usp50Q6P8X6 390 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ipo5Q8BKC5 1097 aaKnown RBP9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Parp10Q8CIE4 960 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 HyiQ8R1F5 277 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Spata17Q9D552 379 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 ParvgQ9ERD8 331 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 MefvQ9JJ26 767 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Cd2apQ9JLQ0 637 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Znfx1Q8R151 1909 aaKnown RBP9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Lrp5Q91VN0 1614 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Shank3Q4ACU6 1730 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Prss40A6H6T1 365 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Tmem132bF7BAB2 1078 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Lmnb2P21619 596 aaKnown RBP9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Aco1P28271 889 aaKnown RBP9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Hspa9P38647 679 aaKnown RBP9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ccdc138Q0VF22 680 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ppp1r21Q3TDD9 780 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Znf496Q5SXI5 585 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Specc1Q5SXY1 1067 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Rhpn1Q61085 643 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Gja3Q64448 417 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Sept9Q80UG5 583 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ttll4Q80UG8 1193 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ttc7aQ8BGB2 858 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Susd4Q8BH32 490 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Dnajc28Q8VCE1 385 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ppp2r5dQ91V89 594 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 SmtnQ921U8 923 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Vwa5aQ99KC8 793 aaKnown RBP9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Tex19.1Q99MV2 351 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ppp1r3gQ9CW07 347 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Lrrc57Q9D1G5 239 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Lonrf3Q9D4H7 753 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Sept14Q9DA97 430 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Prpf4Q9DAW6 521 aaKnown RBP9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 March8Q9DBD2 286 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Plscr1Q9JJ00 328 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ddx20Q9JJY4 825 aaKnown RBP9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Bcl9lQ67FY2 1494 aa9.02□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Fam81bA0A140LI28 432 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 1700029H14RikE9PY36 240 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 ChkbO55229 394 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Prl2c2P04095 224 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 D1Pas1P16381 660 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Serpina1bP22599 413 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 PtgdrP70263 357 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Pkn1P70268 946 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Cyfip2Q5SQX6 1253 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ces1eQ64176 562 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Rbm15bQ6PHZ5 887 aaKnown RBP9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Tekt3Q6X6Z7 490 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Rasgrp4Q8BTM9 673 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ube2sQ921J4 223 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Rnf34Q99KR6 376 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Capn12Q9ER56 720 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Tsga8Q9JJL0 238 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Fmnl1Q9JL26 1094 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Cyth1Q9QX11 398 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Irs4Q9Z0Y7 1216 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Gm4985A2ALC6 410 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Stag2O35638 1231 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Casp1P29452 402 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Lig1P37913 916 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Gad1P48318 593 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Gjb6P70689 261 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Zc3h18Q0P678 948 aaKnown RBP9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Fam117bQ3U3E2 584 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Tspyl3Q3UYP3 334 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Myo19Q5SV80 963 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Sik1Q60670 779 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Tsg101Q61187 391 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Myo6Q64331 1265 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ccdc172Q810N9 267 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Jmjd4Q8BFT6 427 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Armcx3Q8BHS6 379 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Klhl7Q8BUL5 586 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Klhl20Q8VCK5 604 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 3830403N18RikQ9D6C3 208 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 AllcQ9JHX6 414 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Entpd5Q9WUZ9 427 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Magea10A2AMW4 325 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Prr5lA2AVJ5 370 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 P4hbP09103 509 aaKnown RBP9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Abcb4P21440 1276 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Scg2Q03517 617 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Slf2Q6P9P0 1278 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Cnot10Q8BH15 744 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ccdc87Q8CDL9 855 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 4930449I24RikQ9D5E3 319 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Arpp21Q9DCB4 807 aa9.01□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Iqcj-Schip1A0A088MLT8 559 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Ncf2O70145 525 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Klc1O88447 541 aa9□□□□□ -0.97
Cdc40-201ENSMUST00000044166 Schip1P0DPB4 484 aa9□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 30.6 ms