RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Prpf31Q8CCF0 499 aaKnown RBP9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 LrgukQ9D5S7 820 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Plxnc1Q9QZC2 1574 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Sos2Q02384 1333 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 NxnP97346 435 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Kctd16Q5DTY9 427 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Kif11Q6P9P6 1052 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Nod1Q8BHB0 953 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Spata31E9QAF0 1014 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Hcls1P49710 486 aaKnown RBP9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 GmpsQ3THK7 693 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Psip1Q99JF8 528 aaKnown RBP9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Sema4dO09126 861 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Rad51bO35719 350 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Tmod1P49813 359 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Pja2Q80U04 707 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ece2Q80Z60 881 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ireb2Q811J3 963 aaKnown RBP9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Rapgef5Q8C0Q9 814 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ano4Q8C5H1 955 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Cyp4f40G3UW81 524 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 HdxQ14B70 692 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Atp2a3Q64518 1038 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Stxbp5Q8K400 1152 aaKnown RBP9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Vmn1r191Q8K4D0 298 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Mphosph8Q3TYA6 858 aaKnown RBP9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Gucy2fQ5SDA5 1108 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Znf335A2A5K6 1337 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Sec31aQ3UPL0 1230 aaKnown RBP9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Wdr44Q6NVE8 915 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Pcdhb14Q6PB90 796 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Znf507Q6ZPY5 941 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Fbxo28Q8BIG4 368 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Rint1Q8BZ36 792 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ttc1Q91Z38 292 aa9.49□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Nmt1O70310 496 aaKnown RBP9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Rnf40Q3U319 1001 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Edrf1Q6GQV7 1239 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 C130026I21RikQ8C898 291 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ccdc92Q8VDN4 314 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Olfr390Q8VEZ7 311 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 SyncQ9EPM5 470 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Epc2Q8C0I4 808 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Cpa5Q8R4H4 436 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Card14Q99KF0 999 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Pard3bQ9CSB4 1203 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Cyth1Q9QX11 398 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Xxylt1Q3U4G3 392 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Kctd3Q8BFX3 815 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 WaslQ91YD9 501 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Dach1Q9QYB2 751 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ppfia4B8QI36 1187 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Pcdha4O88689 947 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Senp1P59110 640 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 YwhagP61982 247 aaKnown RBP9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Cyp2e1Q05421 493 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Rab34Q64008 259 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Dzip3Q7TPV2 1204 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 CcnyQ8BGU5 341 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Serpinb12Q9D7P9 423 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Serpina3iD3Z450 408 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Gucy1a2F8VQK3 730 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 H2afzP0C0S6 128 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 H2afvQ3THW5 128 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Krt74Q6IFZ9 495 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Retreg2Q6NS82 541 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Rassf6Q80UQ2 353 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Foxo4Q9WVH3 505 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Arhgap23Q69ZH9 1483 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Actn1Q7TPR4 892 aaKnown RBP9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Daam2Q80U19 1115 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Dpp9Q8BVG4 862 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Epha10Q8BYG9 1007 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Gm36210A0A1B0GS00 229 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ppp1r13lQ5I1X5 824 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 GypcQ78HU7 95 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Sap130Q8BIH0 1057 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Cabs1Q8C633 391 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Arhgap18Q8K0Q5 663 aa9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Golph3lQ8R088 285 aaKnown RBP9.48□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Pou5f1P20263 352 aaKnown RBP9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Setd4P58467 439 aa9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ccdc110Q3V125 848 aa9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Lrriq4A6H6A4 596 aa9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Serpinb8O08800 374 aaKnown RBP9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Fam118bQ8C569 351 aa9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ttc4Q8R3H9 386 aa9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Pomgnt1Q91X88 660 aa9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 MbipQ99LQ1 341 aa9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Kcnq5Q9JK45 933 aa9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Gimap9G3X987 291 aa9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Erbb4Q61527 1308 aa9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Cage1Q5IR70 849 aa9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Slc7a14Q8BXR1 771 aa9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 MefvQ9JJ26 767 aa9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Cep126Q0VBV7 1103 aa9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Gm5169Q5M8P2 212 aa9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Ppp2r5bQ6PD28 497 aa9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 IarsQ8BU30 1262 aa9.47□□□□□ -0.89
Ttc28-201ENSMUST00000040111 Thap2Q9D305 217 aa9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms