RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Pspc1Q8R326 523 aaKnown RBP11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Tc2nQ91XT6 489 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Med7Q9CZB6 233 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Abhd2Q9QXM0 425 aa11.15□□□□□ -0.62
Ccdc40-201ENSMUST00000035935 Fam81bA0A140LI28 432 aa11.15□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Lonrf2B2RT44 518 aa11.15□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Heatr4E9Q357 955 aa11.15□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Kcnh2O35219 1162 aa11.15□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 NntQ61941 1086 aaKnown RBP11.15□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 PrimpolQ6P1E7 537 aa11.15□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ttc26Q8BS45 554 aa11.15□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ddx39aQ8VDW0 427 aaKnown RBP11.15□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Rhobtb3Q9CTN4 611 aa11.15□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Fthl17aQ9DAX0 182 aa11.15□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Psmg1Q9JK23 289 aa11.15□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Col16a1Q8BLX7 1580 aa11.15□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Prkg1P0C605 671 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ubn1Q4G0F8 1135 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Hoxa13Q62424 386 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Edrf1Q6GQV7 1239 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Naa35Q6PHQ8 725 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 B4galnt4Q766D5 1034 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ankfy1Q810B6 1169 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 GopcQ8BH60 463 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Trim9Q8C7M3 817 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Tekt2Q922G7 430 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 IydQ9DCX8 285 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Rbp7Q9EPC5 134 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Cd2apQ9JLQ0 637 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Shank2Q80Z38 1476 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Abca14E9Q8F8 1683 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 PplQ9R269 1755 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 AgtP11859 477 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Tlr13Q6R5N8 991 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Slc9c1Q6UJY2 1175 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Cct8l1Q80YT3 562 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Kbtbd4Q8R179 534 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Sgpp1Q9JI99 430 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 DccP70211 1447 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Stag2O35638 1231 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 IvlP48997 467 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 HarsQ61035 509 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Igsf3Q6ZQA6 1194 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Bag2Q91YN9 210 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Mrps22Q9CXW2 359 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Tpd52l2Q9CYZ2 220 aaKnown RBP11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 3830403N18RikQ9D6C3 208 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Diaph3Q9Z207 1171 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Zfp408H7BX78 710 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Sept7O55131 436 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Tfcp2l1Q3UNW5 479 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Rab11fip4Q8BQP8 635 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Zcchc18Q8VD24 393 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Tom1l1Q923U0 474 aa11.14□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Syngap1F6SEU4 1340 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Mmrn1B2RPV6 1210 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Dnaaf5B9EJR8 853 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Gm14685Q52KH6 695 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Olfr121Q5CZY0 321 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Slc30a9Q5IRJ6 567 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Nuak1Q641K5 658 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Tada3Q8R0L9 432 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Mtmr4Q91XS1 1190 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Cep83Q9D5R3 692 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Mtmr7Q9Z2C9 660 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ahcyl2Q68FL4 613 aaKnown RBP11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ms4a5Q810P8 197 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Cabs1Q8C633 391 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Fam20aQ8CID3 541 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Tmem132aQ922P8 1018 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ttc13A0A1L1SSC7 844 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Clrn2B2RVW2 232 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Nedd9O35177 833 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 LdhdQ7TNG8 484 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 AdalQ80SY6 360 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 F13a1Q8BH61 732 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Mis12Q9CY25 206 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Tspan17Q9D7W4 270 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 PycardQ9EPB4 193 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Gm6657A0A1B0GRJ3 277 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 OatP29758 439 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Atp8a1P70704 1164 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 RenbpP82343 430 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Rtkn2Q14B46 604 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Edem3Q2HXL6 931 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Stap2Q8R0L1 411 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Eps8l1Q8R5F8 716 aa11.13□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ssc5dQ8BV57 1371 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Kansl3A2RSY1 903 aaKnown RBP11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 4933406M09RikG3XA12 479 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ctnnd1P30999 938 aaKnown RBP11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Pla2g4aP47713 748 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Wfs1P56695 890 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Zscan2Q07230 614 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Kiaa0319Q5SZV5 1081 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ces1eQ64176 562 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ankrd6Q69ZU8 712 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Yipf1Q91VU1 306 aa11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 Ccdc124Q9D8X2 217 aaKnown RBP11.12□□□□□ -0.63
Ccdc40-201ENSMUST00000035935 1700109H08RikQ9D9C0 210 aa11.12□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms