RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 Gm12185Q5NCB2 835 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Slc9a1Q61165 820 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Ccdc87Q8CDL9 855 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Alg1Q921Q3 482 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Cttnbp2nlQ99LJ0 638 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Rrp15Q9CYX7 281 aaKnown RBP11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 HnrnpcQ9Z204 313 aaKnown RBP11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Kcnh4A2A5F7 1018 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Myl1P05977 188 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Gnat2P50149 354 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Tom1l2Q5SRX1 507 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Scaf8Q6DID3 1268 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Fam196bQ6GQV1 535 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Pramel6Q810Y9 485 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Ginm1Q91WR6 327 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Hps4Q99KG7 671 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Snrnp35Q9D384 244 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Bcl2l12Q9D3J3 255 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Tfap4Q9JIZ5 338 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Tlr2Q9QUN7 784 aa11.59□□□□□ -0.55
Rnf40-201ENSMUST00000033088 Ccdc78D3Z5T1 437 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Cdr1E9Q0B4 517 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Nedd9O35177 833 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Cd3dP04235 173 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Camk4P08414 469 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ets2P15037 468 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Akr1b8P45377 316 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Fdx1P46656 188 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Pcif1P59114 706 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Shc3Q61120 474 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Mylk2Q8VCR8 613 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Slc5a4bQ91ZP4 660 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Nup62clA2AG10 272 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Cyp3a59D3Z2W7 503 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Cyp3a25O09158 503 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Gm10488Q4KL05 212 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Gm14819Q62478 212 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Atg9aQ68FE2 551 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 SltmQ8CH25 1031 aaKnown RBP11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Trim68Q8K243 485 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ddx20Q9JJY4 825 aaKnown RBP11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Kdm3aQ6PCM1 1323 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Lrriq4A6H6A4 596 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Nr1i2O54915 431 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Tagap1P0CAX8 505 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Pik3caP42337 1068 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 S100bP50114 92 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Nol4P60954 483 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Q3TTJ4 293 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Fgfr1opQ66JX5 399 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Tspyl5Q69ZB3 406 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Map10Q8BJS7 891 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Elmo3Q8BYZ7 720 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Lin9Q8C735 542 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ushbp1Q8R370 680 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Trpd52l3Q9CQ14 231 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Git2Q9JLQ2 708 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Klra17Q9JMA4 273 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Itga2bQ9QUM0 1033 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Kif9Q9WV04 790 aa11.58□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Gm4307E9PZY4 289 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Gm5134E9QAB5 671 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Gm4312K9J7E2 289 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 GnaqP21279 359 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ric8aQ3TIR3 530 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Smarca1Q6PGB8 1046 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 SrlQ7TQ48 910 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Dcaf5Q80T85 946 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 QarsQ8BML9 775 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 CactinQ9CS00 772 aaKnown RBP11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ltb4r2Q9JJL9 360 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Guca2bO09051 106 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Sash1P59808 1230 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Gspt2Q149F3 632 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 GmncQ3URY2 333 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Slc9a2Q3ZAS0 814 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ttf2Q5NC05 1138 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 SugctQ7TNE1 436 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Olfr119Q7TRJ5 321 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 PhkbQ7TSH2 1085 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Znf18Q810A1 556 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Lyve1Q8BHC0 318 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Eno4Q8C042 619 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 C130026I21RikQ8C898 291 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Dnaaf1Q9D2H9 634 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Rabl3Q9D4V7 236 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Serpinb12Q9D7P9 423 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Maged2Q9ER67 616 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Gtf2ird1Q9JI57 1104 aaKnown RBP11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Mzf1S4R1L6 814 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 PtproE9Q612 1226 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Lrrc23O35125 340 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Psmc4P54775 418 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Serpinb6Q60854 378 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Kctd6Q8BNL5 237 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ddx19bQ8BZY3 494 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Ints5Q8CHT3 1018 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Igf2bp3Q9CPN8 579 aaKnown RBP11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Erp44Q9D1Q6 406 aa11.57□□□□□ -0.56
Rnf40-201ENSMUST00000033088 Carmil3Q3UFQ8 1375 aa11.57□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms