RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Tlr13Q6R5N8 991 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 A0A1Y7VML8 143 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Klc1O88447 541 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Mylk3Q3UIZ8 795 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Srrm3Q80WV7 648 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Mageb16Q9CWV4 363 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Sdr42e1Q9D665 394 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Strn3Q9ERG2 796 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Abt1Q9QYL7 269 aaKnown RBP10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Osbpl9A2A8Z1 736 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ccng2O08918 344 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Gm136Q3V037 328 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Haus7Q8BKT8 364 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Speer3W4VSP1 261 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Setbp1Q9Z180 1582 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Pdzrn4E9PUZ9 1014 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 GabpaQ00422 454 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Dach2Q925Q8 634 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 HibadhQ99L13 335 aaKnown RBP10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 MbipQ99LQ1 341 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 CoasyQ9DBL7 563 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Psmg1Q9JK23 289 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 AceP09470 1312 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ccdc153P0C7Q1 202 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Prr18Q6PAN7 307 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ccdc65Q8VHI7 493 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Pls3Q99K51 630 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Pgm1Q9D0F9 562 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Cmtm5Q9D6G9 156 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ccdc22Q9JIG7 627 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Nckap5lQ6GQX2 1323 aa10.92□□□□□ -0.66
Ubr1-201ENSMUST00000028728 FscbA1EGX6 1074 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Gucy2eP52785 1108 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Cadps2Q8BYR5 1297 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Wdr60Q8C761 999 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Taf11Q99JX1 211 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Atp6v1e2Q9D593 226 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ehd4Q9EQP2 541 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Eif4enif1Q9EST3 983 aaKnown RBP10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Rpf2Q9JJ80 306 aaKnown RBP10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Asxl2Q8BZ32 1370 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ankfy1Q810B6 1169 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Arfip2Q8K221 341 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Tceal1Q921P9 165 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Gimap4Q99JY3 219 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 CpvlQ9D3S9 478 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Spata17Q9D552 379 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 1700013H16RikQ9DAC5 291 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Abhd2Q9QXM0 425 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Scgb2b11A0A087WR49 112 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Hsf3D0VYS2 492 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 EsrraO08580 422 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Kcnv2Q8CFS6 562 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Morf4l2Q9R0Q4 288 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 PorP37040 678 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 VdrP48281 422 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Kpna2P52293 529 aaKnown RBP10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Mettl17Q3U2U7 461 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Lrrc41Q8K1C9 807 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Stn1Q8K2X3 378 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Cep152A2AUM9 1736 aaKnown RBP10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Serpinb8O08800 374 aaKnown RBP10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Slc4a1P04919 929 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ptk6Q64434 451 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Tbc1d30Q69ZT9 766 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ipo5Q8BKC5 1097 aaKnown RBP10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Slc26a6Q8CIW6 758 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Tldc1Q8K0P3 455 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Tube1Q9D6T1 475 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Wdr17E9Q271 1322 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 ErmardE9Q048 622 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ube4aE9Q735 1028 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Arl4cP61208 192 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Zfp956Q3UZY6 572 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Sh3gl1Q62419 368 aa10.91□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Cyp3a59D3Z2W7 503 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Gm10250G3X9L6 160 aaKnown RBP10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 AgtP11859 477 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Cyth2P63034 400 aaKnown RBP10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Pdp2Q504M2 532 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Olfr121Q5CZY0 321 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 PapolaQ61183 739 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Dact1Q8R4A3 778 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Alg1Q921Q3 482 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Atp5hQ9DCX2 161 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Card9A2AIV8 536 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Eif6O55135 245 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Stat5bP42232 786 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Pcyt1aP49586 367 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Hace1Q3U0D9 909 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 MaeaQ4VC33 396 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Znf652Q5DU09 608 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Trim56Q80VI1 734 aaKnown RBP10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Ppm1kQ8BXN7 372 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Apol9bQ8C7I4 310 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Apol9aQ8VDU3 310 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Q91WD4 421 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Itga2bQ9QUM0 1033 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Vmn2r79E9Q067 851 aa10.9□□□□□ -0.66
Ubr1-201ENSMUST00000028728 Map3k10Q66L42 940 aa10.9□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms