RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeast

Gene LSB1, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSB1	YGR136W	HOM2	P13663	365 aa	Known RBP	4.08	□□□□□ -1.76
LSB1	YGR136W	YAK1	P14680	807 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	SNT1	P25357	1226 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	NTH1	P32356	751 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	DCG1	P32460	244 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	MAK5	P38112	773 aa	Predicted RBP	4.08	□□□□□ -1.76
LSB1	YGR136W	RIM2	P38127	377 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	MRP21	P38175	177 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	IFA38	P38286	347 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	PHO89	P38361	574 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	FRT2	P39734	528 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	GET2	P40056	285 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	ELO3	P40319	345 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	IST3	P40565	148 aa	Predicted RBP	4.08	□□□□□ -1.76
LSB1	YGR136W	ERG10	P41338	398 aa	Known RBP	4.08	□□□□□ -1.76
LSB1	YGR136W	FKH2	P41813	862 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	SNG1	P46950	547 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	ALB1	P47019	175 aa	Predicted RBP	4.08	□□□□□ -1.76
LSB1	YGR136W	MRM2	P53123	320 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	NMA2	P53204	395 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	BUD32	P53323	261 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	MOT3	P54785	490 aa	Known RBP	4.08	□□□□□ -1.76
LSB1	YGR136W	CDC14	Q00684	551 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	YMR206W	Q03695	313 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	YDR109C	Q04585	715 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	SSQ1	Q05931	657 aa	Predicted RBP	4.08	□□□□□ -1.76
LSB1	YGR136W	SEC10	Q06245	871 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	SWC7	Q06707	132 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	LDB18	Q07887	179 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	YLR012C	Q07927	99 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	RPN8	Q08723	338 aa	Known RBP	4.08	□□□□□ -1.76
LSB1	YGR136W	PGC1	Q08959	321 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	ATP16	Q12165	160 aa		4.08	□□□□□ -1.76
LSB1	YGR136W	RRP36	Q12481	300 aa	Predicted RBP	4.08	□□□□□ -1.76
LSB1	YGR136W	COX5A	P00424	153 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	URA3	P03962	267 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	REV1	P12689	985 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	FPR1	P20081	114 aa	Known RBP	4.07	□□□□□ -1.76
LSB1	YGR136W	MCM10	P32354	571 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	RMA1	P36001	430 aa	Known RBP	4.07	□□□□□ -1.76
LSB1	YGR136W	TPO5	P36029	618 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	YHI9	P38765	294 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	YHR182W	P38870	785 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	AST2	P39945	430 aa	Known RBP	4.07	□□□□□ -1.76
LSB1	YGR136W	PUG1	P40100	303 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	YNL195C	P40168	261 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	OSW5	P40219	148 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	YJR061W	P40355	935 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	RIC1	P40395	1056 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	SNL1	P40548	159 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	RMD8	P43620	662 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	GCD14	P46959	383 aa	Predicted RBP	4.07	□□□□□ -1.76
LSB1	YGR136W	HAM1	P47119	197 aa	Known RBP	4.07	□□□□□ -1.76
LSB1	YGR136W	VMA10	P48836	114 aa	Known RBP	4.07	□□□□□ -1.76
LSB1	YGR136W	PHO23	P50947	330 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	SAP4	P53036	818 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	HOS2	P53096	452 aa	Predicted RBP	4.07	□□□□□ -1.76
LSB1	YGR136W	STR3	P53101	465 aa	Known RBP	4.07	□□□□□ -1.76
LSB1	YGR136W	ARC35	P53731	342 aa	Known RBP	4.07	□□□□□ -1.76
LSB1	YGR136W	PET117	Q02771	107 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	MMT1	Q03218	510 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	HPT1	Q04178	221 aa	Known RBP	4.07	□□□□□ -1.76
LSB1	YGR136W	FMP42	Q04991	504 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	SYO1	Q07395	620 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	YOL019W	Q08157	551 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	SLD7	Q08457	257 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	MCH5	Q08777	521 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	NDD1	Q08887	554 aa		4.07	□□□□□ -1.76
LSB1	YGR136W	SEM1	O94742	89 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	PDE2	P06776	526 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	RHO2	P06781	192 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	MSF1	P08425	469 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	POL30	P15873	258 aa	Known RBP	4.06	□□□□□ -1.76
LSB1	YGR136W	HSP26	P15992	214 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
LSB1	YGR136W	AAT2	P23542	418 aa	Known RBP	4.06	□□□□□ -1.76
LSB1	YGR136W	ERG6	P25087	383 aa	Known RBP	4.06	□□□□□ -1.76
LSB1	YGR136W	SPR1	P32603	445 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	SSO1	P32867	290 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	SLC1	P33333	303 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	VPS21	P36017	210 aa	Known RBP	4.06	□□□□□ -1.76
LSB1	YGR136W	CUE2	P36075	443 aa	Known RBP	4.06	□□□□□ -1.76
LSB1	YGR136W	MRPL40	P36534	297 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	CTP1	P38152	299 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	CDS1	P38221	457 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	BZZ1	P38822	633 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	NPT1	P39683	429 aa	Known RBP	4.06	□□□□□ -1.76
LSB1	YGR136W	EXO1	P39875	702 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	MNT3	P40549	630 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	PHB1	P40961	287 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	CCT7	P42943	550 aa	Known RBP	4.06	□□□□□ -1.76
LSB1	YGR136W	SWP82	P43554	623 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	BUD13	P46947	266 aa	Predicted RBP	4.06	□□□□□ -1.76
LSB1	YGR136W	YJL055W	P47044	245 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	TRF5	P48561	642 aa	Known RBP	4.06	□□□□□ -1.76
LSB1	YGR136W	ASN2	P49090	572 aa	Known RBP	4.06	□□□□□ -1.76
LSB1	YGR136W	PYK2	P52489	506 aa	Known RBP	4.06	□□□□□ -1.76
LSB1	YGR136W	MIG2	P53035	382 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	VEL1	P53058	206 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	MTL1	P53214	551 aa		4.06	□□□□□ -1.76
LSB1	YGR136W	YAP1802	P53309	568 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 32 ms