RNA–Protein interactions for RNA: YDR006C

SOK1, Transcript of Protein of unknown function, yeast

Gene SOK1, Length 2,706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOK1	YDR006C	NDC80	P40460	691 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	RPN11	P43588	306 aa	Known RBP	2.76	□□□□□ -1.97
SOK1	YDR006C	YJL118W	P47022	219 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	ZAP1	P47043	880 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	HOC1	P47124	396 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	PHO23	P50947	330 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	COS1	P53822	381 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	SNO2	P53823	222 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	YDR222W	Q04925	415 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	HOF1	Q05080	669 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	YMR034C	Q05131	434 aa	Predicted RBP	2.76	□□□□□ -1.97
SOK1	YDR006C	TMA10	Q06177	86 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	SIL1	Q08199	421 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	NBL1	Q3E7Y6	73 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	SIR3	P06701	978 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	REV1	P12689	985 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	YIH1	P25637	258 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	MVD1	P32377	396 aa	Known RBP	2.76	□□□□□ -1.97
SOK1	YDR006C	DOA1	P36037	715 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	REG2	P38232	338 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	LCP5	P40079	357 aa	Predicted RBP	2.76	□□□□□ -1.97
SOK1	YDR006C	ASG1	P40467	964 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	TIS11	P47977	285 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	UBC11	P52492	156 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	RMD9	P53140	646 aa	Known RBP	2.76	□□□□□ -1.97
SOK1	YDR006C	SPO77	Q06134	477 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	CRN1	Q06440	651 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	HOS1	Q12214	470 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	RAD61	Q99359	647 aa		2.76	□□□□□ -1.97
SOK1	YDR006C	SGS1	P35187	1447 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	TRP4	P07285	380 aa	Predicted RBP	2.75	□□□□□ -1.97
SOK1	YDR006C	ERG20	P08524	352 aa	Known RBP	2.75	□□□□□ -1.97
SOK1	YDR006C	SEC12	P11655	471 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	HXT2	P23585	541 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	ADY2	P25613	283 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	YCR016W	P25617	290 aa	Known RBP	2.75	□□□□□ -1.97
SOK1	YDR006C	SPT10	P35208	640 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	DBP7	P36120	742 aa	Known RBP	2.75	□□□□□ -1.97
SOK1	YDR006C	OMA1	P36163	345 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	RCY1	P39531	840 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	SNZ3	P43545	298 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	IRC7	P43623	340 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	RPA34	P47006	233 aa	Predicted RBP	2.75	□□□□□ -1.97
SOK1	YDR006C	MRX5	P47007	382 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	ABM1	P47146	123 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	CTR1	P49573	406 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	NOP19	P53317	196 aa	Predicted RBP	2.75	□□□□□ -1.97
SOK1	YDR006C	SNZ2	P53824	298 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	PRP38	Q00723	242 aa	Predicted RBP	2.75	□□□□□ -1.97
SOK1	YDR006C	IPK1	Q06667	281 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	GET4	Q12125	312 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	YDR262W	Q12331	272 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	RPP0	P05317	312 aa	Known RBP	2.75	□□□□□ -1.97
SOK1	YDR006C	RNR2	P09938	399 aa	Known RBP	2.75	□□□□□ -1.97
SOK1	YDR006C	SNF3	P10870	884 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	PDA1	P16387	420 aa	Known RBP	2.75	□□□□□ -1.97
SOK1	YDR006C	MEI4	P29467	408 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	RSM22	P36056	628 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	UBA4	P38820	440 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	ALP1	P38971	573 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	YER184C	P39961	794 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	ICE2	P40499	491 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	YJL163C	P46996	555 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	RPC17	P47076	161 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	YGL117W	P53133	265 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	BIO4	P53630	237 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	ATG4	P53867	494 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	SKO1	Q02100	647 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	IZH1	Q03419	316 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	YMR087W	Q04299	284 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	RXT3	Q07458	294 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	NBP2	Q12163	236 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	YOL107W	Q12239	342 aa		2.75	□□□□□ -1.97
SOK1	YDR006C	DCP1	Q12517	231 aa	Predicted RBP	2.75	□□□□□ -1.97
SOK1	YDR006C	RPL6B	P05739	176 aa	Known RBP	2.74	□□□□□ -1.97
SOK1	YDR006C	CDC33	P07260	213 aa	Known RBP	2.74	□□□□□ -1.97
SOK1	YDR006C	GDH1	P07262	454 aa	Known RBP	2.74	□□□□□ -1.97
SOK1	YDR006C	PEP4	P07267	405 aa	Known RBP	2.74	□□□□□ -1.97
SOK1	YDR006C	NFT1	P0CE68	1218 aa		2.74	□□□□□ -1.97
SOK1	YDR006C	CBS2	P14905	389 aa		2.74	□□□□□ -1.97
SOK1	YDR006C	GIT1	P25346	518 aa		2.74	□□□□□ -1.97
SOK1	YDR006C	YPS1	P32329	569 aa		2.74	□□□□□ -1.97
SOK1	YDR006C	YBR144C	P34215	104 aa		2.74	□□□□□ -1.97
SOK1	YDR006C	SKT5	P34226	696 aa		2.74	□□□□□ -1.97
SOK1	YDR006C	NTR2	P36118	322 aa	Predicted RBP	2.74	□□□□□ -1.97
SOK1	YDR006C	SPP381	P38282	291 aa	Predicted RBP	2.74	□□□□□ -1.97
SOK1	YDR006C	FET3	P38993	636 aa		2.74	□□□□□ -1.97
SOK1	YDR006C	FRT2	P39734	528 aa		2.74	□□□□□ -1.97
SOK1	YDR006C	ALG8	P40351	577 aa		2.74	□□□□□ -1.97
SOK1	YDR006C	ATM1	P40416	690 aa		2.74	□□□□□ -1.97
SOK1	YDR006C	YKE4	P40544	346 aa		2.74	□□□□□ -1.97
SOK1	YDR006C	CDC1	P40986	491 aa		2.74	□□□□□ -1.97
SOK1	YDR006C	CWC23	P52868	283 aa	Predicted RBP	2.74	□□□□□ -1.97
SOK1	YDR006C	RRN9	P53437	365 aa		2.74	□□□□□ -1.97
SOK1	YDR006C	RPL6A	Q02326	176 aa	Known RBP	2.74	□□□□□ -1.97
SOK1	YDR006C	ATG21	Q02887	496 aa		2.74	□□□□□ -1.97
SOK1	YDR006C	PIG1	Q06216	648 aa		2.74	□□□□□ -1.97
SOK1	YDR006C	YDL242W	Q07746	117 aa		2.74	□□□□□ -1.97
SOK1	YDR006C	YBR255C-A	Q3E776	120 aa		2.74	□□□□□ -1.97
SOK1	YDR006C	YOS9	Q99220	542 aa		2.74	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms