RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W BCK1Q01389 1478 aa4.48□□□□□ -1.69
VHC1YBR235W STE2D6VTK4 431 aa4.48□□□□□ -1.69
VHC1YBR235W CDC28P00546 298 aaKnown RBP4.48□□□□□ -1.69
VHC1YBR235W SLY1P22213 666 aa4.48□□□□□ -1.69
VHC1YBR235W RPS1BP23248 255 aaKnown RBP4.48□□□□□ -1.69
VHC1YBR235W PUP1P25043 261 aa4.48□□□□□ -1.69
VHC1YBR235W DAL1P32375 460 aa4.48□□□□□ -1.69
VHC1YBR235W RPS1AP33442 255 aaKnown RBP4.48□□□□□ -1.69
VHC1YBR235W AIM29P36154 155 aa4.48□□□□□ -1.69
VHC1YBR235W YBR056WP38081 501 aa4.48□□□□□ -1.69
VHC1YBR235W YBR259WP38338 688 aa4.48□□□□□ -1.69
VHC1YBR235W PPE1P38796 400 aa4.48□□□□□ -1.69
VHC1YBR235W BIG1P38813 335 aa4.48□□□□□ -1.69
VHC1YBR235W GIM4P40005 111 aaKnown RBP4.48□□□□□ -1.69
VHC1YBR235W LSM4P40070 187 aaKnown RBP4.48□□□□□ -1.69
VHC1YBR235W ATM1P40416 690 aa4.48□□□□□ -1.69
VHC1YBR235W RPL10P41805 221 aaKnown RBP4.48□□□□□ -1.69
VHC1YBR235W LOH1P47055 219 aa4.48□□□□□ -1.69
VHC1YBR235W UFD1P53044 361 aa4.48□□□□□ -1.69
VHC1YBR235W PML39Q03760 334 aa4.48□□□□□ -1.69
VHC1YBR235W YPR084WQ06821 456 aa4.48□□□□□ -1.69
VHC1YBR235W YET3Q07451 203 aa4.48□□□□□ -1.69
VHC1YBR235W SNA4Q07549 140 aa4.48□□□□□ -1.69
VHC1YBR235W APC9Q12107 265 aa4.48□□□□□ -1.69
VHC1YBR235W ECM3Q99252 613 aa4.48□□□□□ -1.69
VHC1YBR235W YRF1-2P40105 1681 aa4.48□□□□□ -1.69
VHC1YBR235W TIM9O74700 87 aa4.48□□□□□ -1.69
VHC1YBR235W TPK3P05986 398 aa4.48□□□□□ -1.69
VHC1YBR235W DST1P07273 309 aa4.48□□□□□ -1.69
VHC1YBR235W TRX1P22217 103 aaKnown RBP4.48□□□□□ -1.69
VHC1YBR235W ADE1P27616 306 aa4.48□□□□□ -1.69
VHC1YBR235W CYS3P31373 394 aaKnown RBP4.48□□□□□ -1.69
VHC1YBR235W PTM1P32857 523 aa4.48□□□□□ -1.69
VHC1YBR235W MOT2P34909 587 aaKnown RBP4.48□□□□□ -1.69
VHC1YBR235W EXO5P38289 585 aa4.48□□□□□ -1.69
VHC1YBR235W VHR1P40522 640 aa4.48□□□□□ -1.69
VHC1YBR235W ARC1P46672 376 aaKnown RBP4.48□□□□□ -1.69
VHC1YBR235W UBC12P52491 188 aa4.48□□□□□ -1.69
VHC1YBR235W GET1P53192 235 aa4.48□□□□□ -1.69
VHC1YBR235W YGR273CP53329 174 aa4.48□□□□□ -1.69
VHC1YBR235W KTR6P54070 446 aa4.48□□□□□ -1.69
VHC1YBR235W HXT11P54862 567 aa4.48□□□□□ -1.69
VHC1YBR235W PEX13P80667 386 aa4.48□□□□□ -1.69
VHC1YBR235W MRPS17Q03246 237 aaPredicted RBP4.48□□□□□ -1.69
VHC1YBR235W RAD34Q06665 692 aa4.48□□□□□ -1.69
VHC1YBR235W YPR078CQ06813 372 aa4.48□□□□□ -1.69
VHC1YBR235W NSL1Q12143 216 aa4.48□□□□□ -1.69
VHC1YBR235W MED1Q12321 566 aa4.48□□□□□ -1.69
VHC1YBR235W SPE4Q12455 300 aa4.48□□□□□ -1.69
VHC1YBR235W TRP4P07285 380 aaPredicted RBP4.47□□□□□ -1.69
VHC1YBR235W WHI2P12611 486 aa4.47□□□□□ -1.69
VHC1YBR235W TCP1P12612 559 aaKnown RBP4.47□□□□□ -1.69
VHC1YBR235W PUT4P15380 627 aa4.47□□□□□ -1.69
VHC1YBR235W RFA1P22336 621 aaKnown RBP4.47□□□□□ -1.69
VHC1YBR235W BIO2P32451 375 aa4.47□□□□□ -1.69
VHC1YBR235W YKL162CP36052 402 aa4.47□□□□□ -1.69
VHC1YBR235W GPT2P36148 743 aa4.47□□□□□ -1.69
VHC1YBR235W FLO10P36170 1169 aa4.47□□□□□ -1.69
VHC1YBR235W CST26P38226 397 aa4.47□□□□□ -1.69
VHC1YBR235W FHL1P39521 936 aa4.47□□□□□ -1.69
VHC1YBR235W MRH4P53166 561 aa4.47□□□□□ -1.69
VHC1YBR235W ART5P53244 586 aaKnown RBP4.47□□□□□ -1.69
VHC1YBR235W DCR2Q05924 578 aa4.47□□□□□ -1.69
VHC1YBR235W TMA10Q06177 86 aa4.47□□□□□ -1.69
VHC1YBR235W LAP2Q10740 671 aa4.47□□□□□ -1.69
VHC1YBR235W HRT3Q12347 344 aa4.47□□□□□ -1.69
VHC1YBR235W PCD1Q12524 340 aa4.47□□□□□ -1.69
VHC1YBR235W MED11Q99278 115 aa4.47□□□□□ -1.69
VHC1YBR235W MPD2Q99316 277 aa4.47□□□□□ -1.69
VHC1YBR235W FUM1P08417 488 aaKnown RBP4.47□□□□□ -1.69
VHC1YBR235W RPL8AP17076 256 aaKnown RBP4.47□□□□□ -1.69
VHC1YBR235W AFT1P22149 690 aa4.47□□□□□ -1.69
VHC1YBR235W RNA15P25299 296 aaPredicted RBP4.47□□□□□ -1.69
VHC1YBR235W GCD11P32481 527 aaKnown RBP4.47□□□□□ -1.69
VHC1YBR235W RGT1P32862 1170 aa4.47□□□□□ -1.69
VHC1YBR235W YKR075CP36155 307 aa4.47□□□□□ -1.69
VHC1YBR235W YBR013CP38215 129 aa4.47□□□□□ -1.69
VHC1YBR235W COS8P38723 381 aa4.47□□□□□ -1.69
VHC1YBR235W BST1P43571 1029 aa4.47□□□□□ -1.69
VHC1YBR235W BUD13P46947 266 aaPredicted RBP4.47□□□□□ -1.69
VHC1YBR235W ECM27P47144 725 aa4.47□□□□□ -1.69
VHC1YBR235W PFA5Q03289 374 aa4.47□□□□□ -1.69
VHC1YBR235W CAC2Q04199 468 aa4.47□□□□□ -1.69
VHC1YBR235W YHC1Q05900 231 aaKnown RBP4.47□□□□□ -1.69
VHC1YBR235W WIP1Q2V2P8 89 aa4.47□□□□□ -1.69
VHC1YBR235W YLR422WQ06409 1932 aa4.47□□□□□ -1.69
VHC1YBR235W PRC1P00729 532 aa4.47□□□□□ -1.69
VHC1YBR235W SPE1P08432 466 aa4.47□□□□□ -1.69
VHC1YBR235W MIH1P23748 554 aa4.47□□□□□ -1.69
VHC1YBR235W ISC10P32645 267 aa4.47□□□□□ -1.69
VHC1YBR235W NGR1P32831 672 aaKnown RBP4.47□□□□□ -1.69
VHC1YBR235W PIN4P34217 668 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
VHC1YBR235W MRPL36P36531 177 aa4.47□□□□□ -1.69
VHC1YBR235W LAS21P40367 830 aa4.47□□□□□ -1.69
VHC1YBR235W RPN14P53196 417 aa4.47□□□□□ -1.69
VHC1YBR235W ATF2P53296 535 aa4.47□□□□□ -1.69
VHC1YBR235W NOP13P53883 403 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
VHC1YBR235W SLM2P53955 656 aa4.47□□□□□ -1.69
VHC1YBR235W TIM44Q01852 431 aa4.47□□□□□ -1.69
VHC1YBR235W MTG1Q03151 367 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms