RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 NOD1Q9Y239 953 aa17.19■□□□□ 0.34
PHGDH-231ENST00000641939 SCN5AQ14524 2016 aa17.19■□□□□ 0.34
PHGDH-231ENST00000641939 UMODL1Q5DID0 1318 aa17.19■□□□□ 0.34
PHGDH-231ENST00000641939 TANC1Q9C0D5 1861 aa17.18■□□□□ 0.34
PHGDH-231ENST00000641939 KCNA2P16389 499 aa17.18■□□□□ 0.34
PHGDH-231ENST00000641939 GNA11P29992 359 aa17.18■□□□□ 0.34
PHGDH-231ENST00000641939 SREBF1P36956 1147 aa17.18■□□□□ 0.34
PHGDH-231ENST00000641939 PTGISQ16647 500 aa17.18■□□□□ 0.34
PHGDH-231ENST00000641939 JAKMIP3Q5VZ66 844 aa17.18■□□□□ 0.34
PHGDH-231ENST00000641939 MCTP2Q6DN12 878 aa17.18■□□□□ 0.34
PHGDH-231ENST00000641939 GPR153Q6NV75 609 aa17.18■□□□□ 0.34
PHGDH-231ENST00000641939 CPLX2Q6PUV4 134 aaKnown RBP17.18■□□□□ 0.34
PHGDH-231ENST00000641939 CCDC148Q8NFR7 591 aa17.18■□□□□ 0.34
PHGDH-231ENST00000641939 GPR20Q99678 358 aa17.18■□□□□ 0.34
PHGDH-231ENST00000641939 MXRA8Q9BRK3 442 aa17.18■□□□□ 0.34
PHGDH-231ENST00000641939 C16orf70Q9BSU1 422 aa17.18■□□□□ 0.34
PHGDH-231ENST00000641939 ATP9AO75110 1047 aa17.17■□□□□ 0.34
PHGDH-231ENST00000641939 LGALS2P05162 132 aa17.17■□□□□ 0.34
PHGDH-231ENST00000641939 CCL23P55773 120 aa17.17■□□□□ 0.34
PHGDH-231ENST00000641939 ANKRD1Q15327 319 aa17.17■□□□□ 0.34
PHGDH-231ENST00000641939 GDF6Q6KF10 455 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-231ENST00000641939 C16orf59Q7L2K0 433 aa17.17■□□□□ 0.34
PHGDH-231ENST00000641939 REXO1Q8N1G1 1221 aaKnown RBP17.17■□□□□ 0.34
PHGDH-231ENST00000641939 BICD2Q8TD16 824 aa17.17■□□□□ 0.34
PHGDH-231ENST00000641939 RNPC3Q96LT9 517 aaKnown RBP17.17■□□□□ 0.34
PHGDH-231ENST00000641939 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.17■□□□□ 0.346e-10■■■■□ 22.4
PHGDH-231ENST00000641939 WNT8AQ9H1J5 351 aa17.17■□□□□ 0.34
PHGDH-231ENST00000641939 SLKQ9H2G2 1235 aaPredicted RBP17.17■□□□□ 0.34
PHGDH-231ENST00000641939 IL23AQ9NPF7 189 aa17.17■□□□□ 0.34
PHGDH-231ENST00000641939 SH3GLB2Q9NR46 395 aa17.17■□□□□ 0.34
PHGDH-231ENST00000641939 VPS54Q9P1Q0 977 aa17.17■□□□□ 0.34
PHGDH-231ENST00000641939 HDAC6Q9UBN7 1215 aa17.17■□□□□ 0.34
PHGDH-231ENST00000641939 GTF2IRD1Q9UHL9 959 aa17.17■□□□□ 0.34
PHGDH-231ENST00000641939 H3BRB1 525 aa17.16■□□□□ 0.34
PHGDH-231ENST00000641939 PITPNM1O00562 1244 aa17.16■□□□□ 0.34
PHGDH-231ENST00000641939 ACRP10323 421 aa17.16■□□□□ 0.34
PHGDH-231ENST00000641939 ARHGAP4P98171 946 aa17.16■□□□□ 0.34
PHGDH-231ENST00000641939 SP4Q02446 784 aa17.16■□□□□ 0.34
PHGDH-231ENST00000641939 BFSP2Q13515 415 aa17.16■□□□□ 0.34
PHGDH-231ENST00000641939 CEP55Q53EZ4 464 aa17.16■□□□□ 0.34
PHGDH-231ENST00000641939 TMEM240Q5SV17 173 aa17.16■□□□□ 0.34
PHGDH-231ENST00000641939 PSRC1Q6PGN9 363 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-231ENST00000641939 TUT1Q9H6E5 874 aaKnown RBP17.16■□□□□ 0.34
PHGDH-231ENST00000641939 KCNH7Q9NS40 1196 aa17.16■□□□□ 0.34
PHGDH-231ENST00000641939 PKD2L1Q9P0L9 805 aa17.16■□□□□ 0.34
PHGDH-231ENST00000641939 TPCN1Q9ULQ1 816 aa17.16■□□□□ 0.34
PHGDH-231ENST00000641939 TET1Q8NFU7 2136 aa17.15■□□□□ 0.34
PHGDH-231ENST00000641939 ADAMTS3O15072 1205 aa17.15■□□□□ 0.34
PHGDH-231ENST00000641939 PFKFB2O60825 505 aa17.15■□□□□ 0.34
PHGDH-231ENST00000641939 CDKL5O76039 1030 aa17.15■□□□□ 0.34
PHGDH-231ENST00000641939 DEXIO95424 95 aa17.15■□□□□ 0.34
PHGDH-231ENST00000641939 ZNF76P36508 570 aa17.15■□□□□ 0.34
PHGDH-231ENST00000641939 AK2P54819 239 aa17.15■□□□□ 0.34
PHGDH-231ENST00000641939 SCRN1Q12765 414 aa17.15■□□□□ 0.34
PHGDH-231ENST00000641939 ZNF365Q70YC5 407 aa17.15■□□□□ 0.34
PHGDH-231ENST00000641939 CYP2W1Q8TAV3 490 aa17.15■□□□□ 0.34
PHGDH-231ENST00000641939 SCLYQ96I15 445 aa17.15■□□□□ 0.34
PHGDH-231ENST00000641939 CTAGE1Q96RT6 745 aa17.15■□□□□ 0.34
PHGDH-231ENST00000641939 TELO2Q9Y4R8 837 aa17.15■□□□□ 0.34
PHGDH-231ENST00000641939 MEIS1O00470 390 aa17.14■□□□□ 0.33
PHGDH-231ENST00000641939 CYP3A4P08684 503 aa17.14■□□□□ 0.33
PHGDH-231ENST00000641939 C8orf34Q49A92 452 aa17.14■□□□□ 0.33
PHGDH-231ENST00000641939 UTP14CQ5TAP6 766 aaKnown RBP17.14■□□□□ 0.33
PHGDH-231ENST00000641939 NIPA1Q7RTP0 329 aa17.14■□□□□ 0.33
PHGDH-231ENST00000641939 RPUSD2Q8IZ73 545 aaKnown RBP17.14■□□□□ 0.33
PHGDH-231ENST00000641939 CCDC155Q8N6L0 562 aa17.14■□□□□ 0.33
PHGDH-231ENST00000641939 RETREG2Q8NC44 543 aa17.14■□□□□ 0.33
PHGDH-231ENST00000641939 CAGE1Q8TC20 777 aa17.14■□□□□ 0.33
PHGDH-231ENST00000641939 CRYGNQ8WXF5 182 aa17.14■□□□□ 0.33
PHGDH-231ENST00000641939 ZNF215Q9UL58 517 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-231ENST00000641939 ARP10275 920 aa17.13■□□□□ 0.33
PHGDH-231ENST00000641939 TCF7P36402 384 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-231ENST00000641939 NEK4P51957 841 aa17.13■□□□□ 0.33
PHGDH-231ENST00000641939 NLRP5P59047 1200 aa17.13■□□□□ 0.33
PHGDH-231ENST00000641939 TRIM50Q86XT4 487 aa17.13■□□□□ 0.33
PHGDH-231ENST00000641939 FAM177A1Q8N128 213 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-231ENST00000641939 RASGRP4Q8TDF6 673 aa17.13■□□□□ 0.33
PHGDH-231ENST00000641939 AFAP1L1Q8TED9 768 aa17.13■□□□□ 0.33
PHGDH-231ENST00000641939 SEPT1Q8WYJ6 367 aa17.13■□□□□ 0.33
PHGDH-231ENST00000641939 SDF4Q9BRK5 362 aa17.13■□□□□ 0.33
PHGDH-231ENST00000641939 JPH1Q9HDC5 661 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-231ENST00000641939 NFASCO94856 1347 aa17.13■□□□□ 0.33
PHGDH-231ENST00000641939 CDH23Q9H251 3354 aa17.12■□□□□ 0.33
PHGDH-231ENST00000641939 MYH9P35579 1960 aaKnown RBP17.12■□□□□ 0.33
PHGDH-231ENST00000641939 GSTTP1A0A1W2PQM5 241 aa17.12■□□□□ 0.33
PHGDH-231ENST00000641939 C17orf102A2RUQ5 167 aa17.12■□□□□ 0.33
PHGDH-231ENST00000641939 FAM86B1E9PN63 330 aa17.12■□□□□ 0.33
PHGDH-231ENST00000641939 FGBP02675 491 aa17.12■□□□□ 0.33
PHGDH-231ENST00000641939 PFKMP08237 780 aa17.12■□□□□ 0.33
PHGDH-231ENST00000641939 FAM86B2P0C5J1 330 aa17.12■□□□□ 0.33
PHGDH-231ENST00000641939 IQCF3P0C7M6 154 aa17.12■□□□□ 0.33
PHGDH-231ENST00000641939 SMIM10L2AP0DMW4 78 aa17.12■□□□□ 0.33
PHGDH-231ENST00000641939 SMIM10L2BP0DMW5 78 aa17.12■□□□□ 0.33
PHGDH-231ENST00000641939 RFC2P35250 354 aa17.12■□□□□ 0.33
PHGDH-231ENST00000641939 SMAD3P84022 425 aaKnown RBP17.12■□□□□ 0.33
PHGDH-231ENST00000641939 ZNF200P98182 395 aaPredicted RBP17.12■□□□□ 0.33
PHGDH-231ENST00000641939 PTK7Q13308 1070 aa17.12■□□□□ 0.33
PHGDH-231ENST00000641939 RASIP1Q5U651 963 aa17.12■□□□□ 0.33
PHGDH-231ENST00000641939 PLA2G4DQ86XP0 818 aa17.12■□□□□ 0.33
PHGDH-231ENST00000641939 HERVK_113Q902F9 699 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms