RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 PP2D1A8MPX8 630 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 TGFB3P10600 412 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 KCNA2P16389 499 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 PTMSP20962 102 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 CDC25AP30304 524 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 MFSD14CQ5VZR4 134 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 OTOP1Q7RTM1 612 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 IGSF22Q8N9C0 903 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 TRIB2Q92519 343 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 SYMPKQ92797 1274 aaKnown RBP19.68■□□□□ 0.74
PHGDH-230ENST00000641927 EPSTI1Q96J88 318 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 AK8Q96MA6 479 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 FAM13BQ9NYF5 915 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 VAV3Q9UKW4 847 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 TRIM17Q9Y577 477 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 A0A1B0GVL5 298 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 DHX15O43143 795 aaKnown RBP19.68■□□□□ 0.74
PHGDH-230ENST00000641927 TXNP10599 105 aaKnown RBP19.68■□□□□ 0.74
PHGDH-230ENST00000641927 UBA1P22314 1058 aaKnown RBP19.68■□□□□ 0.74
PHGDH-230ENST00000641927 CMA1P23946 247 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 TXLNAP40222 546 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 SP2Q02086 613 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 SP4Q02446 784 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 PDIA5Q14554 519 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 ZRSR1Q15695 479 aaKnown RBP19.68■□□□□ 0.74
PHGDH-230ENST00000641927 LY6KQ17RY6 165 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 RESP18Q5W5W9 173 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 TAPT1Q6NXT6 567 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 USP49Q70CQ1 688 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 RASSF8Q8NHQ8 419 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 MRPS27Q92552 414 aaKnown RBP19.68■□□□□ 0.74
PHGDH-230ENST00000641927 KATNBL1Q9H079 304 aa19.68■□□□□ 0.74
PHGDH-230ENST00000641927 ARIH2O95376 493 aa19.67■□□□□ 0.74
PHGDH-230ENST00000641927 ELNP15502 786 aa19.67■□□□□ 0.74
PHGDH-230ENST00000641927 UBA7P41226 1012 aa19.67■□□□□ 0.74
PHGDH-230ENST00000641927 ADCYAP1R1P41586 468 aa19.67■□□□□ 0.74
PHGDH-230ENST00000641927 PPP2R5CQ13362 524 aa19.67■□□□□ 0.74
PHGDH-230ENST00000641927 IRF5Q13568 498 aa19.67■□□□□ 0.74
PHGDH-230ENST00000641927 NEDD9Q14511 834 aa19.67■□□□□ 0.74
PHGDH-230ENST00000641927 CCDC73Q6ZRK6 1079 aa19.67■□□□□ 0.74
PHGDH-230ENST00000641927 CYFIP1Q7L576 1253 aa19.67■□□□□ 0.74
PHGDH-230ENST00000641927 TRMT44Q8IYL2 757 aaKnown RBP19.67■□□□□ 0.74
PHGDH-230ENST00000641927 GIMAP8Q8ND71 665 aaPredicted RBP19.67■□□□□ 0.74
PHGDH-230ENST00000641927 UNC45AQ9H3U1 944 aa19.67■□□□□ 0.74
PHGDH-230ENST00000641927 JPH1Q9HDC5 661 aaPredicted RBP19.67■□□□□ 0.74
PHGDH-230ENST00000641927 DDX41Q9UJV9 622 aaKnown RBP19.67■□□□□ 0.74
PHGDH-230ENST00000641927 SAMM50Q9Y512 469 aa19.67■□□□□ 0.74
PHGDH-230ENST00000641927 ADCY3O60266 1144 aa19.66■□□□□ 0.74
PHGDH-230ENST00000641927 SPIRE1Q08AE8 756 aa19.66■□□□□ 0.74
PHGDH-230ENST00000641927 CCDC144BQ3MJ40 725 aa19.66■□□□□ 0.74
PHGDH-230ENST00000641927 SENP7Q9BQF6 1050 aa19.66■□□□□ 0.74
PHGDH-230ENST00000641927 GOLPH3LQ9H4A5 285 aa19.66■□□□□ 0.74
PHGDH-230ENST00000641927 BCAS3Q9H6U6 928 aa19.66■□□□□ 0.74
PHGDH-230ENST00000641927 MLXIPQ9HAP2 919 aa19.66■□□□□ 0.74
PHGDH-230ENST00000641927 NFASCO94856 1347 aa19.66■□□□□ 0.74
PHGDH-230ENST00000641927 GGPS1O95749 300 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 PFKFB1P16118 471 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 KRT76Q01546 638 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 KRT79Q5XKE5 535 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 ERMNQ8TAM6 284 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 PANK2Q9BZ23 570 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 SLC9A2Q9UBY0 812 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 CASP8AP2Q9UKL3 1982 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 EML1O00423 815 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 NDUFA8P51970 172 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 PRMT2P55345 433 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 TMEM63BQ5T3F8 832 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 CCDC62Q6P9F0 684 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 MIER3Q7Z3K6 550 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 CABP7Q86V35 215 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 DHX37Q8IY37 1157 aaKnown RBP19.65■□□□□ 0.74
PHGDH-230ENST00000641927 PDILTQ8N807 584 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 SNX29Q8TEQ0 813 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 KCNH3Q9ULD8 1083 aa19.65■□□□□ 0.74
PHGDH-230ENST00000641927 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.64■□□□□ 0.73
PHGDH-230ENST00000641927 RBM47A0AV96 593 aaKnown RBP19.64■□□□□ 0.73
PHGDH-230ENST00000641927 FOXN1O15353 648 aa19.64■□□□□ 0.73
PHGDH-230ENST00000641927 LIG1P18858 919 aa19.64■□□□□ 0.73
PHGDH-230ENST00000641927 IQSEC1Q6DN90 963 aa19.64■□□□□ 0.73
PHGDH-230ENST00000641927 GPT2Q8TD30 523 aa19.64■□□□□ 0.73
PHGDH-230ENST00000641927 COPS5Q92905 334 aa19.64■□□□□ 0.73
PHGDH-230ENST00000641927 FARP2O94887 1054 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-230ENST00000641927 MBD3O95983 291 aa19.63■□□□□ 0.73
PHGDH-230ENST00000641927 CCNE2O96020 404 aa19.63■□□□□ 0.73
PHGDH-230ENST00000641927 IGHA2P01877 340 aa19.63■□□□□ 0.73
PHGDH-230ENST00000641927 ZNF865P0CJ78 1059 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-230ENST00000641927 CCT6AP40227 531 aaKnown RBP19.63■□□□□ 0.73
PHGDH-230ENST00000641927 TNFAIP2Q03169 654 aa19.63■□□□□ 0.73
PHGDH-230ENST00000641927 TRIM32Q13049 653 aa19.63■□□□□ 0.73
PHGDH-230ENST00000641927 CELF3Q5SZQ8 465 aaKnown RBP19.63■□□□□ 0.73
PHGDH-230ENST00000641927 GJC2Q5T442 439 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-230ENST00000641927 HAUS3Q68CZ6 603 aa19.63■□□□□ 0.73
PHGDH-230ENST00000641927 ZNF746Q6NUN9 644 aaPredicted RBP19.63■□□□□ 0.73
PHGDH-230ENST00000641927 CDK5RAP3Q96JB5 506 aa19.63■□□□□ 0.73
PHGDH-230ENST00000641927 PLIN2Q99541 437 aa19.63■□□□□ 0.73
PHGDH-230ENST00000641927 DISC1Q9NRI5 854 aa19.63■□□□□ 0.73
PHGDH-230ENST00000641927 CCDC39Q9UFE4 941 aa19.63■□□□□ 0.73
PHGDH-230ENST00000641927 DOCK5Q9H7D0 1870 aa19.63■□□□□ 0.73
PHGDH-230ENST00000641927 WDR64B1ANS9 1081 aa19.62■□□□□ 0.73
PHGDH-230ENST00000641927 HSPA1AP0DMV8 641 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms