RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 CYP2W1Q8TAV3 490 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 LSM14BQ9BX40 385 aaKnown RBP18.61■□□□□ 0.57
PHGDH-223ENST00000641597 TRIM34Q9BYJ4 488 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 HPCAL4Q9UM19 191 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 ACTN1P12814 892 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 MRPL12P52815 198 aaKnown RBP18.61■□□□□ 0.57
PHGDH-223ENST00000641597 RNASE9P60153 205 aaKnown RBP18.61■□□□□ 0.57
PHGDH-223ENST00000641597 JAG1P78504 1218 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 SEMA3FQ13275 785 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 CRAMP1Q96RY5 1269 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 PACSIN1Q9BY11 444 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 FAM204AQ9H8W3 233 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 ATF5Q9Y2D1 282 aaPredicted RBP18.61■□□□□ 0.57
PHGDH-223ENST00000641597 ATP6V0A2Q9Y487 856 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 PCDHA2Q9Y5H9 948 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 COL4A3BPQ9Y5P4 624 aa18.61■□□□□ 0.57
PHGDH-223ENST00000641597 CAPN2P17655 700 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 ADRA2BP18089 450 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 NAP1L1P55209 391 aaKnown RBP18.6■□□□□ 0.57
PHGDH-223ENST00000641597 SEPT2Q15019 361 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 ASTE1Q2TB18 679 aaPredicted RBP18.6■□□□□ 0.57
PHGDH-223ENST00000641597 PRR16Q569H4 304 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 SIAH1Q8IUQ4 282 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 SP8Q8IXZ3 490 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 PROM2Q8N271 834 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 EXOC4Q96A65 974 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 OSBPL9Q96SU4 736 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 SELENOOQ9BVL4 669 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 COA1Q9GZY4 146 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 LCMT1Q9UIC8 334 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 LTBP1Q14766 1721 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 EIF3JO75822 258 aaKnown RBP18.6■□□□□ 0.57
PHGDH-223ENST00000641597 CYP11B2P19099 503 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 HOXA13P31271 388 aaPredicted RBP18.6■□□□□ 0.57
PHGDH-223ENST00000641597 CYP4A11Q02928 519 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 PABPC4Q13310 644 aaKnown RBP eCLIP18.6■□□□□ 0.579e-7■■■■□ 21.6
PHGDH-223ENST00000641597 FAM83BQ5T0W9 1011 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 MEX3CQ5U5Q3 659 aaKnown RBP18.6■□□□□ 0.57
PHGDH-223ENST00000641597 SH3BP5LQ7L8J4 393 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 GOLPH3Q9H4A6 298 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 JRKLQ9Y4A0 524 aa18.6■□□□□ 0.57
PHGDH-223ENST00000641597 hCG_1984214I3L0E3 225 aa18.59■□□□□ 0.57
PHGDH-223ENST00000641597 RNF40O75150 1001 aa18.59■□□□□ 0.57
PHGDH-223ENST00000641597 POLD1P28340 1107 aa18.59■□□□□ 0.57
PHGDH-223ENST00000641597 GGCXP38435 758 aa18.59■□□□□ 0.57
PHGDH-223ENST00000641597 RBM5P52756 815 aaKnown RBP eCLIP18.59■□□□□ 0.57
PHGDH-223ENST00000641597 FKBP3Q00688 224 aaKnown RBP18.59■□□□□ 0.57
PHGDH-223ENST00000641597 CDC37Q16543 378 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-223ENST00000641597 CCDC84Q86UT8 332 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-223ENST00000641597 TXLNBQ8N3L3 684 aa18.59■□□□□ 0.57
PHGDH-223ENST00000641597 ZNF713Q8N859 430 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-223ENST00000641597 TLR10Q9BXR5 811 aa18.59■□□□□ 0.57
PHGDH-223ENST00000641597 ANO3Q9BYT9 981 aa18.59■□□□□ 0.57
PHGDH-223ENST00000641597 ANO9A1A5B4 782 aa18.59■□□□□ 0.57
PHGDH-223ENST00000641597 ZSCAN5CA6NGD5 496 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-223ENST00000641597 MEIS2O14770 477 aa18.59■□□□□ 0.57
PHGDH-223ENST00000641597 USO1O60763 962 aaKnown RBP18.59■□□□□ 0.57
PHGDH-223ENST00000641597 TACC1O75410 805 aa18.59■□□□□ 0.57
PHGDH-223ENST00000641597 FTCDO95954 541 aa18.59■□□□□ 0.57
PHGDH-223ENST00000641597 PPP1R2P41236 205 aa18.59■□□□□ 0.57
PHGDH-223ENST00000641597 CCNI2Q6ZMN8 369 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-223ENST00000641597 SPATA4Q8NEY3 305 aa18.59■□□□□ 0.57
PHGDH-223ENST00000641597 TRIM58Q8NG06 486 aa18.59■□□□□ 0.57
PHGDH-223ENST00000641597 TSG101Q99816 390 aa18.59■□□□□ 0.57
PHGDH-223ENST00000641597 RSPH10B2B2RC85 870 aa18.58■□□□□ 0.57
PHGDH-223ENST00000641597 RSPH10BP0C881 870 aa18.58■□□□□ 0.57
PHGDH-223ENST00000641597 GPS2Q13227 327 aa18.58■□□□□ 0.57
PHGDH-223ENST00000641597 ORC2Q13416 577 aaPredicted RBP18.58■□□□□ 0.57
PHGDH-223ENST00000641597 HSP90B2PQ58FF3 399 aa18.58■□□□□ 0.57
PHGDH-223ENST00000641597 SPICE1Q8N0Z3 855 aa18.58■□□□□ 0.57
PHGDH-223ENST00000641597 FAM133AQ8N9E0 248 aa18.58■□□□□ 0.57
PHGDH-223ENST00000641597 GBP3Q9H0R5 595 aa18.58■□□□□ 0.57
PHGDH-223ENST00000641597 CALCOCO1Q9P1Z2 691 aa18.58■□□□□ 0.57
PHGDH-223ENST00000641597 AFF2P51816 1311 aa18.58■□□□□ 0.57
PHGDH-223ENST00000641597 G3V3G9 751 aa18.58■□□□□ 0.56
PHGDH-223ENST00000641597 AGPSO00116 658 aa18.58■□□□□ 0.56
PHGDH-223ENST00000641597 KRT18P05783 430 aaKnown RBP18.58■□□□□ 0.56
PHGDH-223ENST00000641597 CRKP46108 304 aa18.58■□□□□ 0.56
PHGDH-223ENST00000641597 CKAP4Q07065 602 aaKnown RBP18.58■□□□□ 0.56
PHGDH-223ENST00000641597 KCNA1Q09470 495 aa18.58■□□□□ 0.56
PHGDH-223ENST00000641597 RAPGEF1Q13905 1077 aa18.58■□□□□ 0.56
PHGDH-223ENST00000641597 DCAF8Q5TAQ9 597 aa18.58■□□□□ 0.56
PHGDH-223ENST00000641597 MSL1Q68DK7 614 aa18.58■□□□□ 0.56
PHGDH-223ENST00000641597 CATSPER3Q86XQ3 398 aa18.58■□□□□ 0.56
PHGDH-223ENST00000641597 TBC1D5Q92609 795 aa18.58■□□□□ 0.56
PHGDH-223ENST00000641597 TEKT1Q969V4 418 aa18.58■□□□□ 0.56
PHGDH-223ENST00000641597 KCTD10Q9H3F6 313 aa18.58■□□□□ 0.56
PHGDH-223ENST00000641597 RBM12Q9NTZ6 932 aaKnown RBP18.58■□□□□ 0.56
PHGDH-223ENST00000641597 A0A087X0T9 212 aa18.57■□□□□ 0.56
PHGDH-223ENST00000641597 FAM86B1E9PN63 330 aa18.57■□□□□ 0.56
PHGDH-223ENST00000641597 LCA5LO95447 670 aa18.57■□□□□ 0.56
PHGDH-223ENST00000641597 FAM86B2P0C5J1 330 aa18.57■□□□□ 0.56
PHGDH-223ENST00000641597 FAM228BP0C875 321 aa18.57■□□□□ 0.56
PHGDH-223ENST00000641597 KLHDC7AQ5VTJ3 777 aa18.57■□□□□ 0.56
PHGDH-223ENST00000641597 SLFN13Q68D06 897 aa18.57■□□□□ 0.56
PHGDH-223ENST00000641597 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.57■□□□□ 0.56
PHGDH-223ENST00000641597 EMILIN3Q9NT22 766 aa18.57■□□□□ 0.56
PHGDH-223ENST00000641597 ADAMTS1Q9UHI8 967 aa18.57■□□□□ 0.56
PHGDH-223ENST00000641597 ESYT3A0FGR9 886 aa18.57■□□□□ 0.56
PHGDH-223ENST00000641597 SFI1A8K8P3 1242 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms