RNA–Protein interactions for RNA: ENST00000640657.1

HNRNPU-230, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 4,323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-230ENST00000640657 COL23A1Q86Y22 540 aaPredicted RBP5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 MFN1Q8IWA4 741 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 ST13P4Q8IZP2 240 aaPredicted RBP5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 STAG2Q8N3U4 1231 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 ANKRD13CQ8N6S4 541 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 ZBTB38Q8NAP3 1195 aaPredicted RBP5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 ZCRB1Q8TBF4 217 aaKnown RBP5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 SNX29Q8TEQ0 813 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 U2AF1L4Q8WU68 220 aaKnown RBP5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 LZICQ8WZA0 190 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 ZNF594Q96JF6 807 aaPredicted RBP5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 STRBPQ96SI9 672 aaKnown RBP5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 PLIN2Q99541 437 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 SH3GL2Q99962 352 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 YIPF3Q9GZM5 350 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 PUS7LQ9H0K6 701 aaKnown RBP5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 HOMER2Q9NSB8 354 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 HPS5Q9UPZ3 1129 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 TRPC6Q9Y210 931 aa5.46□□□□□ -1.53
HNRNPU-230ENST00000640657 SLIT1O75093 1534 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 JCADQ9P266 1359 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 ARHGEF28Q8N1W1 1705 aaKnown RBP5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 ABLIM1O14639 778 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 FTCDO95954 541 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 MYCNP04198 464 aaPredicted RBP5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 AMPD2Q01433 879 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 KLC1Q07866 573 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 LRRC24Q50LG9 513 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 LGSNQ5TDP6 509 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 BTNL9Q6UXG8 535 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 GSTA5Q7RTV2 222 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 PROSER2Q86WR7 435 aaPredicted RBP5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 SYCP3Q8IZU3 236 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 FUKQ8N0W3 1084 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 GUF1Q8N442 669 aaKnown RBP5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 ANKRD42Q8N9B4 389 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 OSBPL1AQ9BXW6 950 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 MLXIPQ9HAP2 919 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 GPHNQ9NQX3 736 aaPredicted RBP5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 COL15A1P39059 1388 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 CEMIPQ8WUJ3 1361 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 KDM6AO15550 1401 aaPredicted RBP5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 ERVV-2B6SEH9 535 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 ATP6V1G2O95670 118 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 FECHP22830 423 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 CNGA1P29973 690 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 CDC27P30260 824 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 CHRNA3P32297 505 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 PHBP35232 272 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 MDM2Q00987 491 aaPredicted RBP5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 RIPK1Q13546 671 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 MEA1Q16626 185 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 HERC4Q5GLZ8 1057 aaPredicted RBP5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 FAM26FQ5R3K3 315 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 RHOT2Q8IXI1 618 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 SH2D3CQ8N5H7 860 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 PPP1R14CQ8TAE6 165 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 NSMCE1Q8WV22 266 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 ARL8AQ96BM9 186 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 THOC1Q96FV9 657 aaKnown RBP5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 DDX27Q96GQ7 796 aaKnown RBP5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 GDF3Q9NR23 364 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 BSDC1Q9NW68 430 aaPredicted RBP5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 FBXL5Q9UKA1 691 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 INTUQ9ULD6 942 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 PLAGL2Q9UPG8 496 aa5.46□□□□□ -1.54
HNRNPU-230ENST00000640657 CCDC160A6NGH7 325 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 PPFIA2O75334 1257 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 FAM13AO94988 1023 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 NQO1P15559 274 aaKnown RBP5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 CTNNA2P26232 953 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 TRPC3Q13507 836 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 NAB2Q15742 525 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 EXOC3L4Q17RC7 722 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 PARP10Q53GL7 1025 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 LACTB2Q53H82 288 aaPredicted RBP5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 CYB5R4Q7L1T6 521 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 IGDCC4Q8TDY8 1250 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 GDAQ9Y2T3 454 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 PCDH11XQ9BZA7 1347 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 PCDH11YQ9BZA8 1340 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 THAP12O43422 761 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 AHCYL1O43865 530 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 DIAPH2O60879 1101 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 PFDN1O60925 122 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 PDE8BO95263 885 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 AFPP02771 609 aaKnown RBP5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 TXKP42681 527 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 POLE2P56282 527 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 PPP1R2P3Q6NXS1 205 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 TRMT10CQ7L0Y3 403 aaKnown RBP5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 NBPF5PQ86XG9 351 aaPredicted RBP5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 GIMAP8Q8ND71 665 aaPredicted RBP5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 LARP4BQ92615 738 aaKnown RBP5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 FAM212AQ96EL1 285 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 FGD4Q96M96 766 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 C7orf25Q9BPX7 421 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 PPCSQ9HAB8 311 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 ATP8A2Q9NTI2 1148 aa5.45□□□□□ -1.54
HNRNPU-230ENST00000640657 PANK4Q9NVE7 773 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms