RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 CCZ1BP86790 482 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 CCZ1P86791 482 aaPredicted RBP8.95□□□□□ -0.98
NECAP1-227ENST00000640648 OTUD6AQ7L8S5 288 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 KIAA2013Q8IYS2 634 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 STKLD1Q8NE28 680 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 EEF2KMTQ96G04 330 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 ZFRQ96KR1 1074 aaKnown RBP8.95□□□□□ -0.98
NECAP1-227ENST00000640648 NLRP3Q96P20 1036 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 HINFPQ9BQA5 517 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 DCLRE1BQ9H816 532 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 RTEL1Q9NZ71 1219 aa8.95□□□□□ -0.98
NECAP1-227ENST00000640648 TRAF5O00463 557 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 KCNB1Q14721 858 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 POTEEQ6S8J3 1075 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 SLF2Q8IX21 1173 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 NEK9Q8TD19 979 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 CALML6Q8TD86 181 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 RSPH1Q8WYR4 309 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 VTI1AQ96AJ9 217 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 SKA1Q96BD8 255 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 XAB2Q9HCS7 855 aaKnown RBP8.94□□□□□ -0.98
NECAP1-227ENST00000640648 BZW2Q9Y6E2 419 aaKnown RBP8.94□□□□□ -0.98
NECAP1-227ENST00000640648 CDHR2Q9BYE9 1310 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 ADCY9O60503 1353 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 RAPGEF1Q13905 1077 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 MYOCDQ8IZQ8 938 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 DDX17Q92841 729 aaKnown RBP8.94□□□□□ -0.98
NECAP1-227ENST00000640648 FERMT2Q96AC1 680 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 CYFIP2Q96F07 1278 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 SEC16BQ96JE7 1060 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 POLR3CQ9BUI4 534 aaPredicted RBP8.94□□□□□ -0.98
NECAP1-227ENST00000640648 TIMMDC1Q9NPL8 285 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 R3HDM2Q9Y2K5 976 aaKnown RBP8.94□□□□□ -0.98
NECAP1-227ENST00000640648 KDRP35968 1356 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 TMEM110-MUSTN1A8MSY1 372 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 EEF1DP29692 281 aaKnown RBP8.94□□□□□ -0.98
NECAP1-227ENST00000640648 TUBA3EQ6PEY2 450 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 CTAGE3PQ8IX95 158 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 GALNT15Q8N3T1 639 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 NSUN7Q8NE18 718 aaKnown RBP8.94□□□□□ -0.98
NECAP1-227ENST00000640648 HAUS7Q99871 368 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.94□□□□□ -0.98
NECAP1-227ENST00000640648 FAM170AA1A519 330 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 COBLO75128 1261 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 BAG2O95816 211 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 APOA1P02647 267 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 PYGBP11216 843 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 LTKP29376 864 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 RAP1GDS1P52306 607 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 TFAP4Q01664 338 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 PUM3Q15397 648 aaKnown RBP8.94□□□□□ -0.98
NECAP1-227ENST00000640648 ZBTB41Q5SVQ8 909 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 UBE2Q1Q7Z7E8 422 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 SAMD3Q8N6K7 520 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 SYBUQ9NX95 663 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 ZMYND8Q9ULU4 1186 aaPredicted RBP8.94□□□□□ -0.98
NECAP1-227ENST00000640648 PCDHA5Q9Y5H7 936 aa8.94□□□□□ -0.98
NECAP1-227ENST00000640648 PPP6R2O75170 966 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 S100BP04271 92 aaPredicted RBP8.93□□□□□ -0.98
NECAP1-227ENST00000640648 KRT7P08729 469 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 ATP4AP20648 1035 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 CTNNA2P26232 953 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 TSPY1Q01534 308 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 SPIDRQ14159 915 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 RCN2Q14257 317 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 RCN1Q15293 331 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 TMTC3Q6ZXV5 915 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 RSRC2Q7L4I2 434 aaKnown RBP8.93□□□□□ -0.98
NECAP1-227ENST00000640648 TRPM8Q7Z2W7 1104 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 DNAJC10Q8IXB1 793 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 PEX5LQ8IYB4 626 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 PI4K2BQ8TCG2 481 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 FAM167BQ9BTA0 163 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 ZWILCHQ9H900 591 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 PASKQ96RG2 1323 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 PTCH1Q13635 1447 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 GOLGA8TH3BQL2 631 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 HEXIM1O94992 359 aaKnown RBP8.93□□□□□ -0.98
NECAP1-227ENST00000640648 MMEP08473 750 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 GOLGA8HP0CJ92 632 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 EEF1GP26641 437 aaKnown RBP8.93□□□□□ -0.98
NECAP1-227ENST00000640648 SF3A3Q12874 501 aaKnown RBP eCLIP8.93□□□□□ -0.98
NECAP1-227ENST00000640648 WLSQ5T9L3 541 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 CCNI2Q6ZMN8 369 aaPredicted RBP8.93□□□□□ -0.98
NECAP1-227ENST00000640648 EIF1ADQ8N9N8 165 aaKnown RBP8.93□□□□□ -0.98
NECAP1-227ENST00000640648 PFDN4Q9NQP4 134 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 DLGAP2Q9P1A6 1054 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 SSX2IPQ9Y2D8 614 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 GNA14O95837 355 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 CCDC159P0C7I6 412 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 KCNA2P16389 499 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 ASPHQ12797 758 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 DCAF17Q5H9S7 520 aaPredicted RBP8.93□□□□□ -0.98
NECAP1-227ENST00000640648 KRT80Q6KB66 452 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 CCDC25Q86WR0 208 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 ICA1LQ8NDH6 482 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 NELFBQ8WX92 580 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 SETDB2Q96T68 719 aa8.93□□□□□ -0.98
NECAP1-227ENST00000640648 FHDC1Q9C0D6 1143 aaPredicted RBP8.93□□□□□ -0.98
NECAP1-227ENST00000640648 MRGBPQ9NV56 204 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms