RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 BRF1Q92994 677 aa28.91■■■□□ 2.22
VEGFA-230ENST00000640482 RIC8AQ9NPQ8 531 aa28.91■■■□□ 2.22
VEGFA-230ENST00000640482 H3BRB1 525 aa28.9■■■□□ 2.22
VEGFA-230ENST00000640482 RBL2Q08999 1139 aa28.9■■■□□ 2.22
VEGFA-230ENST00000640482 PTK7Q13308 1070 aa28.9■■■□□ 2.22
VEGFA-230ENST00000640482 GPR20Q99678 358 aa28.9■■■□□ 2.22
VEGFA-230ENST00000640482 FTOQ9C0B1 505 aaKnown RBP eCLIP28.9■■■□□ 2.225e-19■□□□□ 10.1
VEGFA-230ENST00000640482 ZNF576Q9H609 170 aa28.9■■■□□ 2.22
VEGFA-230ENST00000640482 TUT1Q9H6E5 874 aaKnown RBP28.9■■■□□ 2.22
VEGFA-230ENST00000640482 PPP4R2Q9NY27 417 aa28.9■■■□□ 2.22
VEGFA-230ENST00000640482 TANC1Q9C0D5 1861 aa28.89■■■□□ 2.22
VEGFA-230ENST00000640482 PARNO95453 639 aaKnown RBP28.89■■■□□ 2.22
VEGFA-230ENST00000640482 SELPP16109 830 aa28.89■■■□□ 2.22
VEGFA-230ENST00000640482 PBX2P40425 430 aa28.89■■■□□ 2.22
VEGFA-230ENST00000640482 ADCY7P51828 1080 aa28.89■■■□□ 2.22
VEGFA-230ENST00000640482 ERICH6BQ5W0A0 696 aa28.89■■■□□ 2.22
VEGFA-230ENST00000640482 DHX38Q92620 1227 aaKnown RBP28.89■■■□□ 2.22
VEGFA-230ENST00000640482 GLT8D2Q9H1C3 349 aa28.89■■■□□ 2.22
VEGFA-230ENST00000640482 BARHL2Q9NY43 387 aa28.89■■■□□ 2.22
VEGFA-230ENST00000640482 COL6A3P12111 3177 aa28.88■■■□□ 2.21
VEGFA-230ENST00000640482 STXBP3O00186 592 aa28.88■■■□□ 2.21
VEGFA-230ENST00000640482 ADD1P35611 737 aaKnown RBP28.88■■■□□ 2.21
VEGFA-230ENST00000640482 TYW1BQ6NUM6 668 aa28.88■■■□□ 2.21
VEGFA-230ENST00000640482 LRRC8DQ7L1W4 858 aa28.88■■■□□ 2.21
VEGFA-230ENST00000640482 ZNF215Q9UL58 517 aaPredicted RBP28.88■■■□□ 2.21
VEGFA-230ENST00000640482 UBIAD1Q9Y5Z9 338 aa28.88■■■□□ 2.21
VEGFA-230ENST00000640482 MAFGO15525 162 aa28.87■■■□□ 2.21
VEGFA-230ENST00000640482 FOSP01100 380 aaPredicted RBP28.87■■■□□ 2.21
VEGFA-230ENST00000640482 CKBP12277 381 aa28.87■■■□□ 2.21
VEGFA-230ENST00000640482 ITGB5P18084 799 aa28.87■■■□□ 2.21
VEGFA-230ENST00000640482 MTMR1Q13613 665 aa28.87■■■□□ 2.21
VEGFA-230ENST00000640482 MYLIPQ8WY64 445 aa28.87■■■□□ 2.21
VEGFA-230ENST00000640482 AGXT2Q9BYV1 514 aa28.87■■■□□ 2.21
VEGFA-230ENST00000640482 NID2Q14112 1375 aa28.87■■■□□ 2.21
VEGFA-230ENST00000640482 C17orf102A2RUQ5 167 aa28.86■■■□□ 2.21
VEGFA-230ENST00000640482 SMCO2A6NFE2 343 aa28.86■■■□□ 2.21
VEGFA-230ENST00000640482 ATP2A2P16615 1042 aaKnown RBP28.86■■■□□ 2.21
VEGFA-230ENST00000640482 SP4Q02446 784 aa28.86■■■□□ 2.21
VEGFA-230ENST00000640482 JADE2Q9NQC1 790 aa28.86■■■□□ 2.21
VEGFA-230ENST00000640482 SMIM10L2AP0DMW4 78 aa28.85■■■□□ 2.21
VEGFA-230ENST00000640482 SMIM10L2BP0DMW5 78 aa28.85■■■□□ 2.21
VEGFA-230ENST00000640482 FOSL2P15408 326 aa28.85■■■□□ 2.21
VEGFA-230ENST00000640482 KCNA2P16389 499 aa28.85■■■□□ 2.21
VEGFA-230ENST00000640482 ZNF200P98182 395 aaPredicted RBP28.85■■■□□ 2.21
VEGFA-230ENST00000640482 GRIN2CQ14957 1233 aa28.85■■■□□ 2.21
VEGFA-230ENST00000640482 PFKFB3Q16875 520 aaPredicted RBP28.85■■■□□ 2.21
VEGFA-230ENST00000640482 SCN5AQ14524 2016 aa28.85■■■□□ 2.21
VEGFA-230ENST00000640482 AP3B2Q13367 1082 aa28.84■■■□□ 2.21
VEGFA-230ENST00000640482 UTP14CQ5TAP6 766 aaKnown RBP28.84■■■□□ 2.21
VEGFA-230ENST00000640482 ATP6V0A1Q93050 837 aa28.84■■■□□ 2.21
VEGFA-230ENST00000640482 ATP9AO75110 1047 aa28.83■■■□□ 2.21
VEGFA-230ENST00000640482 BAIAP3O94812 1187 aa28.83■■■□□ 2.21
VEGFA-230ENST00000640482 GNAT1P11488 350 aa28.83■■■□□ 2.21
VEGFA-230ENST00000640482 SCG2P13521 617 aa28.83■■■□□ 2.21
VEGFA-230ENST00000640482 HOXC8P31273 242 aa28.83■■■□□ 2.21
VEGFA-230ENST00000640482 HIC1Q14526 733 aa28.83■■■□□ 2.21
VEGFA-230ENST00000640482 TRIM71Q2Q1W2 868 aaKnown RBP28.83■■■□□ 2.21
VEGFA-230ENST00000640482 RUFY3Q7L099 469 aa28.83■■■□□ 2.21
VEGFA-230ENST00000640482 SERINC5Q86VE9 423 aa28.83■■■□□ 2.21
VEGFA-230ENST00000640482 SLC9A7Q96T83 725 aa28.83■■■□□ 2.21
VEGFA-230ENST00000640482 ANO3Q9BYT9 981 aa28.83■■■□□ 2.21
VEGFA-230ENST00000640482 PCDHA11Q9Y5I1 949 aa28.83■■■□□ 2.21
VEGFA-230ENST00000640482 AKAP17AQ02040 695 aaKnown RBP28.82■■■□□ 2.2
VEGFA-230ENST00000640482 TRIM50Q86XT4 487 aa28.82■■■□□ 2.2
VEGFA-230ENST00000640482 PHOSPHO2Q8TCD6 241 aa28.82■■■□□ 2.2
VEGFA-230ENST00000640482 CCDC12Q8WUD4 166 aaPredicted RBP28.82■■■□□ 2.2
VEGFA-230ENST00000640482 PGBD1Q96JS3 809 aa28.82■■■□□ 2.2
VEGFA-230ENST00000640482 MXRA8Q9BRK3 442 aa28.82■■■□□ 2.2
VEGFA-230ENST00000640482 NKX2-4Q9H2Z4 354 aa28.82■■■□□ 2.2
VEGFA-230ENST00000640482 RNPEPQ9H4A4 650 aa28.82■■■□□ 2.2
VEGFA-230ENST00000640482 SLC28A3Q9HAS3 691 aa28.82■■■□□ 2.2
VEGFA-230ENST00000640482 PKD2L1Q9P0L9 805 aa28.82■■■□□ 2.2
VEGFA-230ENST00000640482 PRPF3O43395 683 aaKnown RBP28.81■■■□□ 2.2
VEGFA-230ENST00000640482 TCF7P36402 384 aaPredicted RBP28.81■■■□□ 2.2
VEGFA-230ENST00000640482 CLK2P49760 499 aaKnown RBP28.81■■■□□ 2.2
VEGFA-230ENST00000640482 RABGGTBP53611 331 aa28.81■■■□□ 2.2
VEGFA-230ENST00000640482 ZNF618Q5T7W0 954 aa28.81■■■□□ 2.2
VEGFA-230ENST00000640482 MAFAQ8NHW3 353 aaPredicted RBP28.81■■■□□ 2.2
VEGFA-230ENST00000640482 SEPT1Q8WYJ6 367 aa28.81■■■□□ 2.2
VEGFA-230ENST00000640482 WNT8BQ93098 351 aa28.81■■■□□ 2.2
VEGFA-230ENST00000640482 ZSWIM6Q9HCJ5 1215 aa28.81■■■□□ 2.2
VEGFA-230ENST00000640482 YBX2Q9Y2T7 364 aaKnown RBP28.81■■■□□ 2.2
VEGFA-230ENST00000640482 TELO2Q9Y4R8 837 aa28.81■■■□□ 2.2
VEGFA-230ENST00000640482 CYP46A1Q9Y6A2 500 aa28.81■■■□□ 2.2
VEGFA-230ENST00000640482 DOCK5Q9H7D0 1870 aa28.8■■■□□ 2.2
VEGFA-230ENST00000640482 CXCL10P02778 98 aa28.8■■■□□ 2.2
VEGFA-230ENST00000640482 GPNMBQ14956 572 aa28.8■■■□□ 2.2
VEGFA-230ENST00000640482 CNKSR3Q6P9H4 555 aa28.8■■■□□ 2.2
VEGFA-230ENST00000640482 TRIP12Q14669 1992 aaPredicted RBP28.79■■■□□ 2.2
VEGFA-230ENST00000640482 ESYT2A0FGR8 921 aa28.79■■■□□ 2.2
VEGFA-230ENST00000640482 NBNO60934 754 aa28.79■■■□□ 2.2
VEGFA-230ENST00000640482 SREBF1P36956 1147 aa28.79■■■□□ 2.2
VEGFA-230ENST00000640482 THPOP40225 353 aa28.79■■■□□ 2.2
VEGFA-230ENST00000640482 KCNJ6P48051 423 aa28.79■■■□□ 2.2
VEGFA-230ENST00000640482 EVCP57679 992 aa28.79■■■□□ 2.2
VEGFA-230ENST00000640482 CEP55Q53EZ4 464 aa28.79■■■□□ 2.2
VEGFA-230ENST00000640482 TM6SF1Q9BZW5 370 aa28.79■■■□□ 2.2
VEGFA-230ENST00000640482 C6orf50Q9HD87 102 aa28.79■■■□□ 2.2
VEGFA-230ENST00000640482 KCNH7Q9NS40 1196 aa28.79■■■□□ 2.2
VEGFA-230ENST00000640482 TMEM260Q9NX78 707 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms