RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 MTMR1Q13613 665 aa20.26■□□□□ 0.83
PTPN11-207ENST00000639857 NTRK3Q16288 839 aa20.26■□□□□ 0.83
PTPN11-207ENST00000639857 GDF6Q6KF10 455 aaPredicted RBP20.26■□□□□ 0.83
PTPN11-207ENST00000639857 DEFB123Q8N688 67 aa20.26■□□□□ 0.83
PTPN11-207ENST00000639857 HERVK_113Q902F9 699 aa20.26■□□□□ 0.83
PTPN11-207ENST00000639857 ANO3Q9BYT9 981 aa20.26■□□□□ 0.83
PTPN11-207ENST00000639857 ZMYND12Q9H0C1 365 aa20.26■□□□□ 0.83
PTPN11-207ENST00000639857 JADE2Q9NQC1 790 aa20.26■□□□□ 0.83
PTPN11-207ENST00000639857 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.25■□□□□ 0.83
PTPN11-207ENST00000639857 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.25■□□□□ 0.83
PTPN11-207ENST00000639857 PARNO95453 639 aaKnown RBP20.25■□□□□ 0.83
PTPN11-207ENST00000639857 LGALS2P05162 132 aa20.25■□□□□ 0.83
PTPN11-207ENST00000639857 SREBF1P36956 1147 aa20.25■□□□□ 0.83
PTPN11-207ENST00000639857 CCL23P55773 120 aa20.25■□□□□ 0.83
PTPN11-207ENST00000639857 CYFIP1Q7L576 1253 aa20.25■□□□□ 0.83
PTPN11-207ENST00000639857 RETREG2Q8NC44 543 aa20.25■□□□□ 0.83
PTPN11-207ENST00000639857 CCDC148Q8NFR7 591 aa20.25■□□□□ 0.83
PTPN11-207ENST00000639857 AFAP1L1Q8TED9 768 aa20.25■□□□□ 0.83
PTPN11-207ENST00000639857 IL17RAQ96F46 866 aa20.25■□□□□ 0.83
PTPN11-207ENST00000639857 GPR20Q99678 358 aa20.25■□□□□ 0.83
PTPN11-207ENST00000639857 HDAC6Q9UBN7 1215 aa20.25■□□□□ 0.83
PTPN11-207ENST00000639857 H3BRB1 525 aa20.24■□□□□ 0.83
PTPN11-207ENST00000639857 FGBP02675 491 aa20.24■□□□□ 0.83
PTPN11-207ENST00000639857 KCNA2P16389 499 aa20.24■□□□□ 0.83
PTPN11-207ENST00000639857 GNA11P29992 359 aa20.24■□□□□ 0.83
PTPN11-207ENST00000639857 CHMP4BP1P59074 171 aa20.24■□□□□ 0.83
PTPN11-207ENST00000639857 PKN1Q16512 942 aa20.24■□□□□ 0.83
PTPN11-207ENST00000639857 ZNF697Q5TEC3 545 aa20.24■□□□□ 0.83
PTPN11-207ENST00000639857 ZNF365Q70YC5 407 aa20.24■□□□□ 0.83
PTPN11-207ENST00000639857 TRIM22Q8IYM9 498 aa20.24■□□□□ 0.83
PTPN11-207ENST00000639857 FAM177A1Q8N128 213 aaPredicted RBP20.24■□□□□ 0.83
PTPN11-207ENST00000639857 CTAGE1Q96RT6 745 aa20.24■□□□□ 0.83
PTPN11-207ENST00000639857 MXRA8Q9BRK3 442 aa20.24■□□□□ 0.83
PTPN11-207ENST00000639857 ALG1Q9BT22 464 aa20.24■□□□□ 0.83
PTPN11-207ENST00000639857 UPF3BQ9BZI7 483 aaKnown RBP20.24■□□□□ 0.83
PTPN11-207ENST00000639857 TUT1Q9H6E5 874 aaKnown RBP20.24■□□□□ 0.83
PTPN11-207ENST00000639857 C6orf50Q9HD87 102 aa20.24■□□□□ 0.83
PTPN11-207ENST00000639857 PDRG1Q9NUG6 133 aa20.24■□□□□ 0.83
PTPN11-207ENST00000639857 ZNF215Q9UL58 517 aaPredicted RBP20.24■□□□□ 0.83
PTPN11-207ENST00000639857 GBF1Q92538 1859 aa20.24■□□□□ 0.83
PTPN11-207ENST00000639857 ACRP10323 421 aa20.23■□□□□ 0.83
PTPN11-207ENST00000639857 HOXC8P31273 242 aa20.23■□□□□ 0.83
PTPN11-207ENST00000639857 PTK7Q13308 1070 aa20.23■□□□□ 0.83
PTPN11-207ENST00000639857 NIPA1Q7RTP0 329 aa20.23■□□□□ 0.83
PTPN11-207ENST00000639857 BICD2Q8TD16 824 aa20.23■□□□□ 0.83
PTPN11-207ENST00000639857 SH3GLB2Q9NR46 395 aa20.23■□□□□ 0.83
PTPN11-207ENST00000639857 SORBS3O60504 671 aa20.22■□□□□ 0.83
PTPN11-207ENST00000639857 IQCF3P0C7M6 154 aa20.22■□□□□ 0.83
PTPN11-207ENST00000639857 CEP55Q53EZ4 464 aa20.22■□□□□ 0.83
PTPN11-207ENST00000639857 CPLX2Q6PUV4 134 aaKnown RBP20.22■□□□□ 0.83
PTPN11-207ENST00000639857 REXO1Q8N1G1 1221 aaKnown RBP20.22■□□□□ 0.83
PTPN11-207ENST00000639857 PHKBQ93100 1093 aa20.22■□□□□ 0.83
PTPN11-207ENST00000639857 SCLYQ96I15 445 aa20.22■□□□□ 0.83
PTPN11-207ENST00000639857 BCAS3Q9H6U6 928 aa20.22■□□□□ 0.83
PTPN11-207ENST00000639857 MTMR10Q9NXD2 777 aa20.22■□□□□ 0.83
PTPN11-207ENST00000639857 NFASCO94856 1347 aa20.22■□□□□ 0.83
PTPN11-207ENST00000639857 CPLX1O14810 134 aa20.21■□□□□ 0.83
PTPN11-207ENST00000639857 ATP9AO75110 1047 aa20.21■□□□□ 0.83
PTPN11-207ENST00000639857 CCT2P78371 535 aaKnown RBP20.21■□□□□ 0.83
PTPN11-207ENST00000639857 ARHGAP4P98171 946 aa20.21■□□□□ 0.83
PTPN11-207ENST00000639857 PPP1R13LQ8WUF5 828 aa20.21■□□□□ 0.83
PTPN11-207ENST00000639857 CRYGNQ8WXF5 182 aa20.21■□□□□ 0.83
PTPN11-207ENST00000639857 SLC26A6Q9BXS9 759 aa20.21■□□□□ 0.83
PTPN11-207ENST00000639857 NCOA5Q9HCD5 579 aaKnown RBP20.21■□□□□ 0.83
PTPN11-207ENST00000639857 KCNH7Q9NS40 1196 aa20.21■□□□□ 0.83
PTPN11-207ENST00000639857 TET1Q8NFU7 2136 aa20.21■□□□□ 0.83
PTPN11-207ENST00000639857 CYP3A4P08684 503 aa20.2■□□□□ 0.82
PTPN11-207ENST00000639857 GNAT1P11488 350 aa20.2■□□□□ 0.82
PTPN11-207ENST00000639857 ACTN1P12814 892 aa20.2■□□□□ 0.82
PTPN11-207ENST00000639857 SELPP16109 830 aa20.2■□□□□ 0.82
PTPN11-207ENST00000639857 ANKRD1Q15327 319 aa20.2■□□□□ 0.82
PTPN11-207ENST00000639857 Q7L0L9 218 aa20.2■□□□□ 0.82
PTPN11-207ENST00000639857 SERINC5Q86VE9 423 aa20.2■□□□□ 0.82
PTPN11-207ENST00000639857 SEPT1Q8WYJ6 367 aa20.2■□□□□ 0.82
PTPN11-207ENST00000639857 DHX38Q92620 1227 aaKnown RBP20.2■□□□□ 0.82
PTPN11-207ENST00000639857 VWCEQ96DN2 955 aa20.2■□□□□ 0.82
PTPN11-207ENST00000639857 JPH1Q9HDC5 661 aaPredicted RBP20.2■□□□□ 0.82
PTPN11-207ENST00000639857 C17orf102A2RUQ5 167 aa20.19■□□□□ 0.82
PTPN11-207ENST00000639857 MEIS1O00470 390 aa20.19■□□□□ 0.82
PTPN11-207ENST00000639857 CAND2O75155 1236 aa20.19■□□□□ 0.82
PTPN11-207ENST00000639857 DEXIO95424 95 aa20.19■□□□□ 0.82
PTPN11-207ENST00000639857 SMIM10L2AP0DMW4 78 aa20.19■□□□□ 0.82
PTPN11-207ENST00000639857 SMIM10L2BP0DMW5 78 aa20.19■□□□□ 0.82
PTPN11-207ENST00000639857 TCF7P36402 384 aaPredicted RBP20.19■□□□□ 0.82
PTPN11-207ENST00000639857 SSRP1Q08945 709 aaKnown RBP20.19■□□□□ 0.82
PTPN11-207ENST00000639857 LRRC8DQ7L1W4 858 aa20.19■□□□□ 0.82
PTPN11-207ENST00000639857 PGBD1Q96JS3 809 aa20.19■□□□□ 0.82
PTPN11-207ENST00000639857 SDF4Q9BRK5 362 aa20.19■□□□□ 0.82
PTPN11-207ENST00000639857 TMEM260Q9NX78 707 aa20.19■□□□□ 0.82
PTPN11-207ENST00000639857 STXBP5LQ9Y2K9 1186 aa20.19■□□□□ 0.82
PTPN11-207ENST00000639857 EMSYQ7Z589 1322 aa20.19■□□□□ 0.82
PTPN11-207ENST00000639857 CDKL5O76039 1030 aa20.18■□□□□ 0.82
PTPN11-207ENST00000639857 CKBP12277 381 aa20.18■□□□□ 0.82
PTPN11-207ENST00000639857 SETQ01105 290 aaPredicted RBP20.18■□□□□ 0.82
PTPN11-207ENST00000639857 TRIM71Q2Q1W2 868 aaKnown RBP20.18■□□□□ 0.82
PTPN11-207ENST00000639857 JAKMIP3Q5VZ66 844 aa20.18■□□□□ 0.82
PTPN11-207ENST00000639857 OTOP2Q7RTS6 562 aa20.18■□□□□ 0.82
PTPN11-207ENST00000639857 ERAP1Q9NZ08 941 aa20.18■□□□□ 0.82
PTPN11-207ENST00000639857 SLC9A2Q9UBY0 812 aa20.18■□□□□ 0.82
PTPN11-207ENST00000639857 BAIAP3O94812 1187 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms