RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 CYFIP1Q7L576 1253 aa21.99■■□□□ 1.11
HLA-A-209ENST00000638375 U2AF1L4Q8WU68 220 aaKnown RBP21.99■■□□□ 1.11
HLA-A-209ENST00000638375 HAS1Q92839 578 aa21.99■■□□□ 1.11
HLA-A-209ENST00000638375 SLC5A5Q92911 643 aa21.99■■□□□ 1.11
HLA-A-209ENST00000638375 EMID1Q96A84 441 aaPredicted RBP21.99■■□□□ 1.11
HLA-A-209ENST00000638375 TELO2Q9Y4R8 837 aa21.99■■□□□ 1.11
HLA-A-209ENST00000638375 NFASCO94856 1347 aa21.99■■□□□ 1.11
HLA-A-209ENST00000638375 FRMPD3Q5JV73 1810 aa21.99■■□□□ 1.11
HLA-A-209ENST00000638375 SGPL1O95470 568 aa21.98■■□□□ 1.11
HLA-A-209ENST00000638375 NKX3-2P78367 333 aa21.98■■□□□ 1.11
HLA-A-209ENST00000638375 METTL7BQ6UX53 244 aa21.98■■□□□ 1.11
HLA-A-209ENST00000638375 DHX37Q8IY37 1157 aaKnown RBP21.98■■□□□ 1.11
HLA-A-209ENST00000638375 TNS4Q8IZW8 715 aa21.98■■□□□ 1.11
HLA-A-209ENST00000638375 CRISPLD2Q9H0B8 497 aa21.98■■□□□ 1.11
HLA-A-209ENST00000638375 OGDHLQ9ULD0 1010 aa21.98■■□□□ 1.11
HLA-A-209ENST00000638375 DDX39AO00148 427 aaKnown RBP21.97■■□□□ 1.11
HLA-A-209ENST00000638375 TBX3O15119 743 aa21.97■■□□□ 1.11
HLA-A-209ENST00000638375 LAMC2Q13753 1193 aa21.97■■□□□ 1.11
HLA-A-209ENST00000638375 CALCRLQ16602 461 aa21.97■■□□□ 1.11
HLA-A-209ENST00000638375 C4orf32Q8N8J7 132 aa21.97■■□□□ 1.11
HLA-A-209ENST00000638375 GIMAP8Q8ND71 665 aaPredicted RBP21.97■■□□□ 1.11
HLA-A-209ENST00000638375 MTMR9Q96QG7 549 aa21.97■■□□□ 1.11
HLA-A-209ENST00000638375 SDF4Q9BRK5 362 aa21.97■■□□□ 1.11
HLA-A-209ENST00000638375 TMEM106CQ9BVX2 250 aa21.97■■□□□ 1.11
HLA-A-209ENST00000638375 FTOQ9C0B1 505 aaKnown RBP eCLIP21.97■■□□□ 1.11
HLA-A-209ENST00000638375 AP5M1Q9H0R1 490 aa21.97■■□□□ 1.11
HLA-A-209ENST00000638375 MLXIPQ9HAP2 919 aa21.97■■□□□ 1.11
HLA-A-209ENST00000638375 PSMD10O75832 226 aa21.96■■□□□ 1.11
HLA-A-209ENST00000638375 C6orf222P0C671 652 aaPredicted RBP21.96■■□□□ 1.11
HLA-A-209ENST00000638375 GJA8P48165 433 aa21.96■■□□□ 1.11
HLA-A-209ENST00000638375 NUCB2P80303 420 aa21.96■■□□□ 1.11
HLA-A-209ENST00000638375 BEX3Q00994 111 aa21.96■■□□□ 1.11
HLA-A-209ENST00000638375 HSDL1Q3SXM5 330 aa21.96■■□□□ 1.11
HLA-A-209ENST00000638375 KLHDC9Q8NEP7 349 aa21.96■■□□□ 1.11
HLA-A-209ENST00000638375 AFG1LQ8WV93 481 aa21.96■■□□□ 1.11
HLA-A-209ENST00000638375 FAM20AQ96MK3 541 aa21.96■■□□□ 1.11
HLA-A-209ENST00000638375 SPATA33Q96N06 139 aa21.96■■□□□ 1.11
HLA-A-209ENST00000638375 RIT2Q99578 217 aa21.96■■□□□ 1.11
HLA-A-209ENST00000638375 JPH1Q9HDC5 661 aaPredicted RBP21.96■■□□□ 1.11
HLA-A-209ENST00000638375 TBC1D22BQ9NU19 505 aa21.96■■□□□ 1.11
HLA-A-209ENST00000638375 DOCK5Q9H7D0 1870 aa21.96■■□□□ 1.11
HLA-A-209ENST00000638375 CCNE2O96020 404 aa21.95■■□□□ 1.1
HLA-A-209ENST00000638375 SP4Q02446 784 aa21.95■■□□□ 1.1
HLA-A-209ENST00000638375 LRRC41Q15345 812 aa21.95■■□□□ 1.1
HLA-A-209ENST00000638375 FSCN1Q16658 493 aaKnown RBP21.95■■□□□ 1.1
HLA-A-209ENST00000638375 FOXD4L6Q3SYB3 417 aaPredicted RBP21.95■■□□□ 1.1
HLA-A-209ENST00000638375 LRCH2Q5VUJ6 765 aa21.95■■□□□ 1.1
HLA-A-209ENST00000638375 FOXD4L3Q6VB84 417 aaPredicted RBP21.95■■□□□ 1.1
HLA-A-209ENST00000638375 USP28Q96RU2 1077 aa21.95■■□□□ 1.1
HLA-A-209ENST00000638375 SPC25Q9HBM1 224 aa21.95■■□□□ 1.1
HLA-A-209ENST00000638375 SLC9A2Q9UBY0 812 aa21.95■■□□□ 1.1
HLA-A-209ENST00000638375 CIZ1Q9ULV3 898 aaPredicted RBP21.95■■□□□ 1.1
HLA-A-209ENST00000638375 CLIC4Q9Y696 253 aa21.95■■□□□ 1.1
HLA-A-209ENST00000638375 A6NJR5 290 aa21.94■■□□□ 1.1
HLA-A-209ENST00000638375 GAS7O60861 476 aa21.94■■□□□ 1.1
HLA-A-209ENST00000638375 MMP3P08254 477 aa21.94■■□□□ 1.1
HLA-A-209ENST00000638375 OR52Z1P0C646 297 aa21.94■■□□□ 1.1
HLA-A-209ENST00000638375 CST5P28325 142 aaPredicted RBP21.94■■□□□ 1.1
HLA-A-209ENST00000638375 PTGDRQ13258 359 aa21.94■■□□□ 1.1
HLA-A-209ENST00000638375 SF3A1Q15459 793 aaKnown RBP21.94■■□□□ 1.1
HLA-A-209ENST00000638375 CCSAPQ6IQ19 270 aaPredicted RBP21.94■■□□□ 1.1
HLA-A-209ENST00000638375 B3GNT9Q6UX72 402 aa21.94■■□□□ 1.1
HLA-A-209ENST00000638375 PPTC7Q8NI37 304 aa21.94■■□□□ 1.1
HLA-A-209ENST00000638375 GPR20Q99678 358 aa21.94■■□□□ 1.1
HLA-A-209ENST00000638375 TEKT3Q9BXF9 490 aa21.94■■□□□ 1.1
HLA-A-209ENST00000638375 VAV3Q9UKW4 847 aa21.94■■□□□ 1.1
HLA-A-209ENST00000638375 MARCH6O60337 910 aa21.93■■□□□ 1.1
HLA-A-209ENST00000638375 MYCNP04198 464 aaPredicted RBP21.93■■□□□ 1.1
HLA-A-209ENST00000638375 ATP2C1P98194 919 aaPredicted RBP21.93■■□□□ 1.1
HLA-A-209ENST00000638375 RNF180Q86T96 592 aa21.93■■□□□ 1.1
HLA-A-209ENST00000638375 SLFN12Q8IYM2 578 aa21.93■■□□□ 1.1
HLA-A-209ENST00000638375 UNC45AQ9H3U1 944 aa21.93■■□□□ 1.1
HLA-A-209ENST00000638375 GSTTP1A0A1W2PQM5 241 aa21.92■■□□□ 1.1
HLA-A-209ENST00000638375 BAG4O95429 457 aaKnown RBP21.92■■□□□ 1.1
HLA-A-209ENST00000638375 TFRCP02786 760 aaKnown RBP21.92■■□□□ 1.1
HLA-A-209ENST00000638375 HOXD8P13378 290 aaPredicted RBP21.92■■□□□ 1.1
HLA-A-209ENST00000638375 TXKP42681 527 aa21.92■■□□□ 1.1
HLA-A-209ENST00000638375 MNX1P50219 401 aaPredicted RBP21.92■■□□□ 1.1
HLA-A-209ENST00000638375 CPT1AP50416 773 aa21.92■■□□□ 1.1
HLA-A-209ENST00000638375 ACTR2P61160 394 aa21.92■■□□□ 1.1
HLA-A-209ENST00000638375 SPIRE1Q08AE8 756 aa21.92■■□□□ 1.1
HLA-A-209ENST00000638375 PTPAQ15257 358 aa21.92■■□□□ 1.1
HLA-A-209ENST00000638375 GNASQ5JWF2 1037 aa21.92■■□□□ 1.1
HLA-A-209ENST00000638375 ARRDC4Q8NCT1 418 aa21.92■■□□□ 1.1
HLA-A-209ENST00000638375 CHAMP1Q96JM3 812 aa21.92■■□□□ 1.1
HLA-A-209ENST00000638375 BRCA2P51587 3418 aa21.92■■□□□ 1.1
HLA-A-209ENST00000638375 MYH15Q9Y2K3 1946 aa21.92■■□□□ 1.1
HLA-A-209ENST00000638375 ELP1O95163 1332 aa21.91■■□□□ 1.1
HLA-A-209ENST00000638375 NOP56O00567 594 aaKnown RBP21.91■■□□□ 1.1
HLA-A-209ENST00000638375 KRT76Q01546 638 aa21.91■■□□□ 1.1
HLA-A-209ENST00000638375 CEBPZQ03701 1054 aaKnown RBP21.91■■□□□ 1.1
HLA-A-209ENST00000638375 DNM1Q05193 864 aaKnown RBP21.91■■□□□ 1.1
HLA-A-209ENST00000638375 PPP2R5CQ13362 524 aa21.91■■□□□ 1.1
HLA-A-209ENST00000638375 KCNA10Q16322 511 aa21.91■■□□□ 1.1
HLA-A-209ENST00000638375 ZNF746Q6NUN9 644 aaPredicted RBP21.91■■□□□ 1.1
HLA-A-209ENST00000638375 ZNF396Q96N95 335 aaPredicted RBP21.91■■□□□ 1.1
HLA-A-209ENST00000638375 TTC12Q9H892 705 aaPredicted RBP21.91■■□□□ 1.1
HLA-A-209ENST00000638375 POLR3EQ9NVU0 708 aa21.91■■□□□ 1.1
HLA-A-209ENST00000638375 TFIP11Q9UBB9 837 aaKnown RBP21.91■■□□□ 1.1
HLA-A-209ENST00000638375 KIAA0100Q14667 2235 aaKnown RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms