RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 LGALS2P05162 132 aa21.73■■□□□ 1.07
CLN6-221ENST00000637494 GNAT1P11488 350 aa21.73■■□□□ 1.07
CLN6-221ENST00000637494 KCNJ6P48051 423 aa21.73■■□□□ 1.07
CLN6-221ENST00000637494 METAP2P50579 478 aaKnown RBP eCLIP21.73■■□□□ 1.07
CLN6-221ENST00000637494 RBL2Q08999 1139 aa21.73■■□□□ 1.07
CLN6-221ENST00000637494 GRIN2CQ14957 1233 aa21.73■■□□□ 1.07
CLN6-221ENST00000637494 WWC2Q6AWC2 1192 aa21.73■■□□□ 1.07
CLN6-221ENST00000637494 Q6ZUG5 572 aa21.73■■□□□ 1.07
CLN6-221ENST00000637494 KCNB2Q92953 911 aa21.73■■□□□ 1.07
CLN6-221ENST00000637494 SLC9A7Q96T83 725 aa21.73■■□□□ 1.07
CLN6-221ENST00000637494 SNX14Q9Y5W7 946 aa21.73■■□□□ 1.07
CLN6-221ENST00000637494 V9GY48 417 aaPredicted RBP21.73■■□□□ 1.07
CLN6-221ENST00000637494 MAFGO15525 162 aa21.72■■□□□ 1.07
CLN6-221ENST00000637494 FOSP01100 380 aaPredicted RBP21.72■■□□□ 1.07
CLN6-221ENST00000637494 CKBP12277 381 aa21.72■■□□□ 1.07
CLN6-221ENST00000637494 ADCY7P51828 1080 aa21.72■■□□□ 1.07
CLN6-221ENST00000637494 SP4Q02446 784 aa21.72■■□□□ 1.07
CLN6-221ENST00000637494 MTMR1Q13613 665 aa21.72■■□□□ 1.07
CLN6-221ENST00000637494 GPR20Q99678 358 aa21.72■■□□□ 1.07
CLN6-221ENST00000637494 NKX2-4Q9H2Z4 354 aa21.72■■□□□ 1.07
CLN6-221ENST00000637494 RIC8AQ9NPQ8 531 aa21.72■■□□□ 1.07
CLN6-221ENST00000637494 PCDHA11Q9Y5I1 949 aa21.72■■□□□ 1.07
CLN6-221ENST00000637494 KIF28PB7ZC32 967 aa21.71■■□□□ 1.07
CLN6-221ENST00000637494 SEMA3FQ13275 785 aa21.71■■□□□ 1.07
CLN6-221ENST00000637494 UTP14CQ5TAP6 766 aaKnown RBP21.71■■□□□ 1.07
CLN6-221ENST00000637494 PHOSPHO2Q8TCD6 241 aa21.71■■□□□ 1.07
CLN6-221ENST00000637494 DHX38Q92620 1227 aaKnown RBP21.71■■□□□ 1.07
CLN6-221ENST00000637494 BRF1Q92994 677 aa21.71■■□□□ 1.07
CLN6-221ENST00000637494 ATP6V0A1Q93050 837 aa21.71■■□□□ 1.07
CLN6-221ENST00000637494 EPB41L2O43491 1005 aaKnown RBP21.7■■□□□ 1.06
CLN6-221ENST00000637494 SMIM10L2AP0DMW4 78 aa21.7■■□□□ 1.06
CLN6-221ENST00000637494 SMIM10L2BP0DMW5 78 aa21.7■■□□□ 1.06
CLN6-221ENST00000637494 APOBRQ0VD83 1088 aa21.7■■□□□ 1.06
CLN6-221ENST00000637494 PPP2R2DQ66LE6 453 aa21.7■■□□□ 1.06
CLN6-221ENST00000637494 CTAGE1Q96RT6 745 aa21.7■■□□□ 1.06
CLN6-221ENST00000637494 BCAS3Q9H6U6 928 aa21.7■■□□□ 1.06
CLN6-221ENST00000637494 BARHL2Q9NY43 387 aa21.7■■□□□ 1.06
CLN6-221ENST00000637494 SCN5AQ14524 2016 aa21.69■■□□□ 1.06
CLN6-221ENST00000637494 SMCO2A6NFE2 343 aa21.69■■□□□ 1.06
CLN6-221ENST00000637494 CPA1P15085 419 aa21.69■■□□□ 1.06
CLN6-221ENST00000637494 RPS6KB1P23443 525 aa21.69■■□□□ 1.06
CLN6-221ENST00000637494 RABGGTBP53611 331 aa21.69■■□□□ 1.06
CLN6-221ENST00000637494 ZNF200P98182 395 aaPredicted RBP21.69■■□□□ 1.06
CLN6-221ENST00000637494 AKAP17AQ02040 695 aaKnown RBP21.69■■□□□ 1.06
CLN6-221ENST00000637494 CNKSR3Q6P9H4 555 aa21.69■■□□□ 1.06
CLN6-221ENST00000637494 CCDC12Q8WUD4 166 aaPredicted RBP21.69■■□□□ 1.06
CLN6-221ENST00000637494 VWCEQ96DN2 955 aa21.69■■□□□ 1.06
CLN6-221ENST00000637494 JADE2Q9NQC1 790 aa21.69■■□□□ 1.06
CLN6-221ENST00000637494 UBIAD1Q9Y5Z9 338 aa21.69■■□□□ 1.06
CLN6-221ENST00000637494 STXBP3O00186 592 aa21.68■■□□□ 1.06
CLN6-221ENST00000637494 EFCAB14O75071 495 aa21.68■■□□□ 1.06
CLN6-221ENST00000637494 ITGB5P18084 799 aa21.68■■□□□ 1.06
CLN6-221ENST00000637494 CDC27P30260 824 aa21.68■■□□□ 1.06
CLN6-221ENST00000637494 THPOP40225 353 aa21.68■■□□□ 1.06
CLN6-221ENST00000637494 FUT2Q10981 343 aa21.68■■□□□ 1.06
CLN6-221ENST00000637494 AP3B2Q13367 1082 aa21.68■■□□□ 1.06
CLN6-221ENST00000637494 SERINC5Q86VE9 423 aa21.68■■□□□ 1.06
CLN6-221ENST00000637494 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.68■■□□□ 1.06
CLN6-221ENST00000637494 SEPT1Q8WYJ6 367 aa21.68■■□□□ 1.06
CLN6-221ENST00000637494 YBX2Q9Y2T7 364 aaKnown RBP21.68■■□□□ 1.06
CLN6-221ENST00000637494 EMSYQ7Z589 1322 aa21.68■■□□□ 1.06
CLN6-221ENST00000637494 LAMA2P24043 3122 aaKnown RBP21.68■■□□□ 1.06
CLN6-221ENST00000637494 ADD1P35611 737 aaKnown RBP21.67■■□□□ 1.06
CLN6-221ENST00000637494 TCF7P36402 384 aaPredicted RBP21.67■■□□□ 1.06
CLN6-221ENST00000637494 ZNF618Q5T7W0 954 aa21.67■■□□□ 1.06
CLN6-221ENST00000637494 MCTP2Q6DN12 878 aa21.67■■□□□ 1.06
CLN6-221ENST00000637494 FBXL16Q8N461 479 aa21.67■■□□□ 1.06
CLN6-221ENST00000637494 MXRA8Q9BRK3 442 aa21.67■■□□□ 1.06
CLN6-221ENST00000637494 ANO3Q9BYT9 981 aa21.67■■□□□ 1.06
CLN6-221ENST00000637494 RNPEPQ9H4A4 650 aa21.67■■□□□ 1.06
CLN6-221ENST00000637494 PRDM12Q9H4Q4 367 aa21.67■■□□□ 1.06
CLN6-221ENST00000637494 PKD2L1Q9P0L9 805 aa21.67■■□□□ 1.06
CLN6-221ENST00000637494 ABHD14A-ACY1A0A1B0GW23 586 aa21.66■■□□□ 1.06
CLN6-221ENST00000637494 RSPH10B2B2RC85 870 aa21.66■■□□□ 1.06
CLN6-221ENST00000637494 ATP9AO75110 1047 aa21.66■■□□□ 1.06
CLN6-221ENST00000637494 CAND2O75155 1236 aa21.66■■□□□ 1.06
CLN6-221ENST00000637494 CXCL10P02778 98 aa21.66■■□□□ 1.06
CLN6-221ENST00000637494 RSPH10BP0C881 870 aa21.66■■□□□ 1.06
CLN6-221ENST00000637494 SCG2P13521 617 aa21.66■■□□□ 1.06
CLN6-221ENST00000637494 KCNA2P16389 499 aa21.66■■□□□ 1.06
CLN6-221ENST00000637494 ZNF76P36508 570 aa21.66■■□□□ 1.06
CLN6-221ENST00000637494 IKBKEQ14164 716 aa21.66■■□□□ 1.06
CLN6-221ENST00000637494 PFKFB3Q16875 520 aaPredicted RBP21.66■■□□□ 1.06
CLN6-221ENST00000637494 TRIM71Q2Q1W2 868 aaKnown RBP21.66■■□□□ 1.06
CLN6-221ENST00000637494 GLG1Q92896 1179 aa21.66■■□□□ 1.06
CLN6-221ENST00000637494 SDF4Q9BRK5 362 aa21.66■■□□□ 1.06
CLN6-221ENST00000637494 C6orf50Q9HD87 102 aa21.66■■□□□ 1.06
CLN6-221ENST00000637494 FAM217BQ9NTX9 383 aaPredicted RBP21.66■■□□□ 1.06
CLN6-221ENST00000637494 SETD4Q9NVD3 440 aa21.66■■□□□ 1.06
CLN6-221ENST00000637494 PPP4R2Q9NY27 417 aa21.66■■□□□ 1.06
CLN6-221ENST00000637494 TRIP12Q14669 1992 aaPredicted RBP21.65■■□□□ 1.06
CLN6-221ENST00000637494 NRCAMQ92823 1304 aa21.65■■□□□ 1.06
CLN6-221ENST00000637494 DLL1O00548 723 aa21.65■■□□□ 1.06
CLN6-221ENST00000637494 TYW1BQ6NUM6 668 aa21.65■■□□□ 1.06
CLN6-221ENST00000637494 TRIM50Q86XT4 487 aa21.65■■□□□ 1.06
CLN6-221ENST00000637494 HERC6Q8IVU3 1022 aa21.65■■□□□ 1.06
CLN6-221ENST00000637494 TNPO1Q92973 898 aaKnown RBP21.65■■□□□ 1.06
CLN6-221ENST00000637494 ZBED2Q9BTP6 218 aa21.65■■□□□ 1.06
CLN6-221ENST00000637494 SMARCAD1Q9H4L7 1026 aa21.65■■□□□ 1.06
CLN6-221ENST00000637494 ERAP1Q9NZ08 941 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms