RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 TMCO2Q7Z6W1 182 aaPredicted RBP21.3■■□□□ 1
CLN6-220ENST00000637450 SRBD1Q8N5C6 995 aaKnown RBP21.3■■□□□ 1
CLN6-220ENST00000637450 SMARCC2Q8TAQ2 1214 aa21.3■■□□□ 1
CLN6-220ENST00000637450 CUL5Q93034 780 aa21.3■■□□□ 1
CLN6-220ENST00000637450 TMEM87BQ96K49 555 aa21.3■■□□□ 1
CLN6-220ENST00000637450 USP26Q9BXU7 913 aa21.3■■□□□ 1
CLN6-220ENST00000637450 C17orf102A2RUQ5 167 aa21.29■■□□□ 1
CLN6-220ENST00000637450 TNFRSF10AO00220 468 aa21.29■■□□□ 1
CLN6-220ENST00000637450 NOP56O00567 594 aaKnown RBP21.29■■□□□ 1
CLN6-220ENST00000637450 SLC27A2O14975 620 aa21.29■■□□□ 1
CLN6-220ENST00000637450 FIBPO43427 364 aa21.29■■□□□ 1
CLN6-220ENST00000637450 EFCAB14O75071 495 aa21.29■■□□□ 1
CLN6-220ENST00000637450 PLEKHA8P1O95397 391 aa21.29■■□□□ 1
CLN6-220ENST00000637450 LIFRP42702 1097 aa21.29■■□□□ 1
CLN6-220ENST00000637450 COL9A3Q14050 684 aaPredicted RBP21.29■■□□□ 1
CLN6-220ENST00000637450 PCNX4Q63HM2 1172 aa21.29■■□□□ 1
CLN6-220ENST00000637450 NFXL1Q6ZNB6 911 aa21.29■■□□□ 1
CLN6-220ENST00000637450 ATP6V0A1Q93050 837 aa21.29■■□□□ 1
CLN6-220ENST00000637450 GPR20Q99678 358 aa21.29■■□□□ 1
CLN6-220ENST00000637450 ESYT1Q9BSJ8 1104 aa21.29■■□□□ 1
CLN6-220ENST00000637450 ZBED2Q9BTP6 218 aa21.29■■□□□ 1
CLN6-220ENST00000637450 RNPEPQ9H4A4 650 aa21.29■■□□□ 1
CLN6-220ENST00000637450 SEC63Q9UGP8 760 aaKnown RBP21.29■■□□□ 1
CLN6-220ENST00000637450 MYH7BA7E2Y1 1941 aa21.28■■□□□ 1
CLN6-220ENST00000637450 LCHNA4D1U4 455 aa21.28■■□□□ 1
CLN6-220ENST00000637450 CCDC69A6NI79 296 aa21.28■■□□□ 1
CLN6-220ENST00000637450 RSPH10B2B2RC85 870 aa21.28■■□□□ 1
CLN6-220ENST00000637450 LGR5O75473 907 aa21.28■■□□□ 1
CLN6-220ENST00000637450 GJB5O95377 273 aa21.28■■□□□ 1
CLN6-220ENST00000637450 RSPH10BP0C881 870 aa21.28■■□□□ 1
CLN6-220ENST00000637450 SMIM10L2AP0DMW4 78 aa21.28■■□□□ 1
CLN6-220ENST00000637450 SMIM10L2BP0DMW5 78 aa21.28■■□□□ 1
CLN6-220ENST00000637450 THPOP40225 353 aa21.28■■□□□ 1
CLN6-220ENST00000637450 NECTIN1Q15223 517 aa21.28■■□□□ 1
CLN6-220ENST00000637450 SPRED2Q7Z698 418 aa21.28■■□□□ 1
CLN6-220ENST00000637450 RAD9AQ99638 391 aa21.28■■□□□ 1
CLN6-220ENST00000637450 SENP7Q9BQF6 1050 aa21.28■■□□□ 1
CLN6-220ENST00000637450 EMSYQ7Z589 1322 aa21.28■■□□□ 1
CLN6-220ENST00000637450 RBAK-RBAKDNI3L0D1 243 aa21.27■■□□□ 1
CLN6-220ENST00000637450 CALM1P0DP23 149 aa21.27■■□□□ 1
CLN6-220ENST00000637450 CALM2P0DP24 149 aa21.27■■□□□ 1
CLN6-220ENST00000637450 CALM3P0DP25 149 aa21.27■■□□□ 1
CLN6-220ENST00000637450 CREB3L3Q68CJ9 461 aa21.27■■□□□ 1
CLN6-220ENST00000637450 CMTR1Q8N1G2 835 aaKnown RBP21.27■■□□□ 1
CLN6-220ENST00000637450 PRRC2BQ5JSZ5 2229 aaKnown RBP21.27■□□□□ 0.99
CLN6-220ENST00000637450 TREHO43280 583 aa21.26■□□□□ 0.99
CLN6-220ENST00000637450 LPXNO60711 386 aa21.26■□□□□ 0.99
CLN6-220ENST00000637450 RXRAP19793 462 aa21.26■□□□□ 0.99
CLN6-220ENST00000637450 GRB10Q13322 594 aa21.26■□□□□ 0.99
CLN6-220ENST00000637450 KRT40Q6A162 431 aa21.26■□□□□ 0.99
CLN6-220ENST00000637450 NLRX1Q86UT6 975 aa21.26■□□□□ 0.99
CLN6-220ENST00000637450 DBF4BQ8NFT6 615 aa21.26■□□□□ 0.99
CLN6-220ENST00000637450 ADAMTS19Q8TE59 1207 aa21.26■□□□□ 0.99
CLN6-220ENST00000637450 PSTPIP2Q9H939 334 aa21.26■□□□□ 0.99
CLN6-220ENST00000637450 TELO2Q9Y4R8 837 aa21.26■□□□□ 0.99
CLN6-220ENST00000637450 MKRN4PQ13434 485 aaPredicted RBP21.25■□□□□ 0.99
CLN6-220ENST00000637450 SKIV2LQ15477 1246 aaKnown RBP21.25■□□□□ 0.99
CLN6-220ENST00000637450 SETD4Q9NVD3 440 aa21.25■□□□□ 0.99
CLN6-220ENST00000637450 SLC12A7Q9Y666 1083 aa21.25■□□□□ 0.99
CLN6-220ENST00000637450 CAND2O75155 1236 aa21.24■□□□□ 0.99
CLN6-220ENST00000637450 GNAT1P11488 350 aa21.24■□□□□ 0.99
CLN6-220ENST00000637450 BMP1P13497 986 aa21.24■□□□□ 0.99
CLN6-220ENST00000637450 TFF2Q03403 129 aa21.24■□□□□ 0.99
CLN6-220ENST00000637450 PLEKHG4Q58EX7 1191 aa21.24■□□□□ 0.99
CLN6-220ENST00000637450 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.24■□□□□ 0.99
CLN6-220ENST00000637450 FANCBQ8NB91 859 aa21.24■□□□□ 0.99
CLN6-220ENST00000637450 GIMAP8Q8ND71 665 aaPredicted RBP21.24■□□□□ 0.99
CLN6-220ENST00000637450 IL27Q8NEV9 243 aa21.24■□□□□ 0.99
CLN6-220ENST00000637450 LRRC2Q9BYS8 371 aa21.24■□□□□ 0.99
CLN6-220ENST00000637450 ANO2Q9NQ90 1003 aa21.24■□□□□ 0.99
CLN6-220ENST00000637450 ADAM17P78536 824 aa21.23■□□□□ 0.99
CLN6-220ENST00000637450 AAK1Q2M2I8 961 aa21.23■□□□□ 0.99
CLN6-220ENST00000637450 UTP14CQ5TAP6 766 aaKnown RBP21.23■□□□□ 0.99
CLN6-220ENST00000637450 TMTC3Q6ZXV5 915 aa21.23■□□□□ 0.99
CLN6-220ENST00000637450 SGMS1Q86VZ5 419 aa21.23■□□□□ 0.99
CLN6-220ENST00000637450 TRIM50Q86XT4 487 aa21.23■□□□□ 0.99
CLN6-220ENST00000637450 RAB11FIP4Q86YS3 637 aa21.23■□□□□ 0.99
CLN6-220ENST00000637450 CCDC82Q8N4S0 544 aa21.23■□□□□ 0.99
CLN6-220ENST00000637450 GPRASP2Q96D09 838 aa21.23■□□□□ 0.99
CLN6-220ENST00000637450 UHRF1Q96T88 793 aaPredicted RBP21.23■□□□□ 0.99
CLN6-220ENST00000637450 LMCD1Q9NZU5 365 aa21.23■□□□□ 0.99
CLN6-220ENST00000637450 ZNF215Q9UL58 517 aaPredicted RBP21.23■□□□□ 0.99
CLN6-220ENST00000637450 NCOR1O75376 2440 aa21.22■□□□□ 0.99
CLN6-220ENST00000637450 hCG_1642624A0A1W2PR95 340 aa21.22■□□□□ 0.99
CLN6-220ENST00000637450 LINC01553A4QN01 128 aa21.22■□□□□ 0.99
CLN6-220ENST00000637450 ATP9AO75110 1047 aa21.22■□□□□ 0.99
CLN6-220ENST00000637450 ITGB5P18084 799 aa21.22■□□□□ 0.99
CLN6-220ENST00000637450 ERVK-21P61565 698 aa21.22■□□□□ 0.99
CLN6-220ENST00000637450 SP4Q02446 784 aa21.22■□□□□ 0.99
CLN6-220ENST00000637450 FAM117BQ6P1L5 589 aa21.22■□□□□ 0.99
CLN6-220ENST00000637450 CDHR1Q96JP9 859 aa21.22■□□□□ 0.99
CLN6-220ENST00000637450 TGS1Q96RS0 853 aaKnown RBP21.22■□□□□ 0.99
CLN6-220ENST00000637450 COG5Q9UP83 839 aa21.22■□□□□ 0.99
CLN6-220ENST00000637450 INSL6Q9Y581 213 aa21.22■□□□□ 0.99
CLN6-220ENST00000637450 AMHP03971 560 aa21.21■□□□□ 0.99
CLN6-220ENST00000637450 KCNA2P16389 499 aa21.21■□□□□ 0.99
CLN6-220ENST00000637450 OSBPL7Q9BZF2 842 aa21.21■□□□□ 0.99
CLN6-220ENST00000637450 SUGCTQ9HAC7 445 aa21.21■□□□□ 0.99
CLN6-220ENST00000637450 UBIAD1Q9Y5Z9 338 aa21.21■□□□□ 0.99
CLN6-220ENST00000637450 BDP1A6H8Y1 2624 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms