RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 UBXN2AP68543 259 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 DOK7Q18PE1 504 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 TBC1D10BQ4KMP7 808 aaPredicted RBP17.26■□□□□ 0.35
CLN5-218ENST00000637397 FAM83BQ5T0W9 1011 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 VCXQ9H320 206 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 CNOT10Q9H9A5 744 aaKnown RBP17.26■□□□□ 0.35
CLN5-218ENST00000637397 ACTR5Q9H9F9 607 aaPredicted RBP17.26■□□□□ 0.35
CLN5-218ENST00000637397 FHOD1Q9Y613 1164 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 FOSP01100 380 aaPredicted RBP17.26■□□□□ 0.35
CLN5-218ENST00000637397 DR1Q01658 176 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 SPATA24Q86W54 205 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 SLC44A5Q8NCS7 719 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 CDK8P49336 464 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 SARNPP82979 210 aaKnown RBP17.26■□□□□ 0.35
CLN5-218ENST00000637397 DPYDQ12882 1025 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 LRCH2Q5VUJ6 765 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 PALM2Q8IXS6 379 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 TMEM47Q9BQJ4 181 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
CLN5-218ENST00000637397 I3L4J1 428 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 MYO1FO00160 1098 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 PDIA6Q15084 440 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 KAZNQ674X7 775 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 MPHOSPH6Q99547 160 aaKnown RBP17.26■□□□□ 0.35
CLN5-218ENST00000637397 AGPAT5Q9NUQ2 364 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 CEP72Q9P209 647 aa17.26■□□□□ 0.35
CLN5-218ENST00000637397 INO80Q9ULG1 1556 aaPredicted RBP17.26■□□□□ 0.35
CLN5-218ENST00000637397 ZC3H13Q5T200 1668 aaKnown RBP17.26■□□□□ 0.35
CLN5-218ENST00000637397 POLR2MP0CAP2 368 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 SEPT2Q15019 361 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 SPICE1Q8N0Z3 855 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 ZNF653Q96CK0 615 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 C1orf112Q9NSG2 853 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 TBK1Q9UHD2 729 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 SERPINB13Q9UIV8 391 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 LEMD3Q9Y2U8 911 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 RASGRF2O14827 1237 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 CYP4F22Q6NT55 531 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 CHURC1Q8WUH1 139 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 RILPQ96NA2 401 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 ZMYND12Q9H0C1 365 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 BSDC1Q9NW68 430 aaPredicted RBP17.25■□□□□ 0.35
CLN5-218ENST00000637397 UTYO14607 1347 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 XDHP47989 1333 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 CDHR2Q9BYE9 1310 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 CCDC188H7C350 402 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 GUCY2CP25092 1073 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 XKR9Q5GH70 373 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 ANKRD40Q6AI12 368 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 SRBD1Q8N5C6 995 aaKnown RBP17.25■□□□□ 0.35
CLN5-218ENST00000637397 CCDC110Q8TBZ0 833 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 PCIF1Q9H4Z3 704 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 RAB20Q9NX57 234 aa17.25■□□□□ 0.35
CLN5-218ENST00000637397 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.24■□□□□ 0.35
CLN5-218ENST00000637397 TARSL2A2RTX5 802 aaKnown RBP17.24■□□□□ 0.35
CLN5-218ENST00000637397 UBE2Q2LH0YL09 131 aa17.24■□□□□ 0.35
CLN5-218ENST00000637397 DKC1O60832 514 aaKnown RBP eCLIP17.24■□□□□ 0.35
CLN5-218ENST00000637397 ITIH3Q06033 890 aa17.24■□□□□ 0.35
CLN5-218ENST00000637397 SGO2Q562F6 1265 aa17.24■□□□□ 0.35
CLN5-218ENST00000637397 HPS3Q969F9 1004 aa17.24■□□□□ 0.35
CLN5-218ENST00000637397 DDX47Q9H0S4 455 aaKnown RBP17.24■□□□□ 0.35
CLN5-218ENST00000637397 POLD4Q9HCU8 107 aa17.24■□□□□ 0.35
CLN5-218ENST00000637397 SNX12Q9UMY4 172 aa17.24■□□□□ 0.35
CLN5-218ENST00000637397 TRIM28Q13263 835 aaKnown RBP17.24■□□□□ 0.35
CLN5-218ENST00000637397 LRRC8CQ8TDW0 803 aa17.24■□□□□ 0.35
CLN5-218ENST00000637397 hCG_1984214I3L0E3 225 aa17.24■□□□□ 0.35
CLN5-218ENST00000637397 TRIM37O94972 964 aa17.24■□□□□ 0.35
CLN5-218ENST00000637397 EIF3BP55884 814 aaKnown RBP17.24■□□□□ 0.35
CLN5-218ENST00000637397 SDCCAG8Q86SQ7 713 aaPredicted RBP17.24■□□□□ 0.35
CLN5-218ENST00000637397 ZNF713Q8N859 430 aaPredicted RBP17.24■□□□□ 0.35
CLN5-218ENST00000637397 TTC16Q8NEE8 873 aa17.24■□□□□ 0.35
CLN5-218ENST00000637397 PSMD1Q99460 953 aa17.24■□□□□ 0.35
CLN5-218ENST00000637397 BHMT2Q9H2M3 363 aa17.24■□□□□ 0.35
CLN5-218ENST00000637397 SNX24Q9Y343 169 aa17.24■□□□□ 0.35
CLN5-218ENST00000637397 ECEL1O95672 775 aa17.24■□□□□ 0.35
CLN5-218ENST00000637397 NSFP46459 744 aaKnown RBP17.24■□□□□ 0.35
CLN5-218ENST00000637397 LGSNQ5TDP6 509 aa17.24■□□□□ 0.35
CLN5-218ENST00000637397 OTUD6AQ7L8S5 288 aa17.24■□□□□ 0.35
CLN5-218ENST00000637397 TSPOAP1O95153 1857 aa17.24■□□□□ 0.35
CLN5-218ENST00000637397 PVALEFA0A1B0GWK0 134 aa17.23■□□□□ 0.35
CLN5-218ENST00000637397 TBC1D1Q86TI0 1168 aaPredicted RBP17.23■□□□□ 0.35
CLN5-218ENST00000637397 RSAD2Q8WXG1 361 aa17.23■□□□□ 0.35
CLN5-218ENST00000637397 ELAC2Q9BQ52 826 aaKnown RBP17.23■□□□□ 0.35
CLN5-218ENST00000637397 CEMIPQ8WUJ3 1361 aa17.23■□□□□ 0.35
CLN5-218ENST00000637397 TESPA1A2RU30 521 aaPredicted RBP17.23■□□□□ 0.35
CLN5-218ENST00000637397 SFI1A8K8P3 1242 aa17.23■□□□□ 0.35
CLN5-218ENST00000637397 IL9RQ01113 521 aa17.23■□□□□ 0.35
CLN5-218ENST00000637397 SH3RF3Q8TEJ3 882 aaPredicted RBP17.23■□□□□ 0.35
CLN5-218ENST00000637397 TEKT3Q9BXF9 490 aa17.23■□□□□ 0.35
CLN5-218ENST00000637397 UBE2TQ9NPD8 197 aaPredicted RBP17.23■□□□□ 0.35
CLN5-218ENST00000637397 PSMC4P43686 418 aa17.23■□□□□ 0.35
CLN5-218ENST00000637397 ADSSL1Q8N142 457 aa17.23■□□□□ 0.35
CLN5-218ENST00000637397 SH2D3CQ8N5H7 860 aa17.23■□□□□ 0.35
CLN5-218ENST00000637397 PHF20Q9BVI0 1012 aa17.23■□□□□ 0.35
CLN5-218ENST00000637397 FUT8Q9BYC5 575 aa17.23■□□□□ 0.35
CLN5-218ENST00000637397 KANSL2Q9H9L4 492 aa17.23■□□□□ 0.35
CLN5-218ENST00000637397 ITIH6Q6UXX5 1313 aa17.23■□□□□ 0.35
CLN5-218ENST00000637397 TXNDC9O14530 226 aa17.23■□□□□ 0.35
CLN5-218ENST00000637397 GAP43P17677 238 aa17.23■□□□□ 0.35
CLN5-218ENST00000637397 MAGOHP61326 146 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms