RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 MEIS2O14770 477 aa7.67□□□□□ -1.18
UPF3B-205ENST00000636792 TNPO2O14787 897 aaKnown RBP7.67□□□□□ -1.18
UPF3B-205ENST00000636792 STX6O43752 255 aa7.67□□□□□ -1.18
UPF3B-205ENST00000636792 CFBP00751 764 aa7.67□□□□□ -1.18
UPF3B-205ENST00000636792 SREBF1P36956 1147 aa7.67□□□□□ -1.18
UPF3B-205ENST00000636792 RPS6P62753 249 aaKnown RBP7.67□□□□□ -1.18
UPF3B-205ENST00000636792 SH3BP2P78314 561 aa7.67□□□□□ -1.18
UPF3B-205ENST00000636792 MDM2Q00987 491 aaPredicted RBP7.67□□□□□ -1.18
UPF3B-205ENST00000636792 MAP2K5Q13163 448 aa7.67□□□□□ -1.18
UPF3B-205ENST00000636792 NPY5RQ15761 445 aa7.67□□□□□ -1.18
UPF3B-205ENST00000636792 OLFML2BQ68BL8 750 aa7.67□□□□□ -1.18
UPF3B-205ENST00000636792 KRT40Q6A162 431 aa7.67□□□□□ -1.18
UPF3B-205ENST00000636792 ATL3Q6DD88 541 aa7.67□□□□□ -1.18
UPF3B-205ENST00000636792 MRPL14Q6P1L8 145 aaKnown RBP7.67□□□□□ -1.18
UPF3B-205ENST00000636792 DIS3L2Q8IYB7 885 aaKnown RBP7.67□□□□□ -1.18
UPF3B-205ENST00000636792 FAM133AQ8N9E0 248 aa7.67□□□□□ -1.18
UPF3B-205ENST00000636792 MORC4Q8TE76 937 aa7.67□□□□□ -1.18
UPF3B-205ENST00000636792 NSUN6Q8TEA1 469 aaKnown RBP7.67□□□□□ -1.18
UPF3B-205ENST00000636792 DDX11Q96FC9 970 aa7.67□□□□□ -1.18
UPF3B-205ENST00000636792 PORCNQ9H237 461 aa7.67□□□□□ -1.18
UPF3B-205ENST00000636792 MORC2Q9Y6X9 1032 aaPredicted RBP7.67□□□□□ -1.18
UPF3B-205ENST00000636792 RPTORQ8N122 1335 aa7.67□□□□□ -1.18
UPF3B-205ENST00000636792 SYNGAP1Q96PV0 1343 aa7.67□□□□□ -1.18
UPF3B-205ENST00000636792 ZSWIM8A7E2V4 1837 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 LOXHD1Q8IVV2 1947 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 MCM3APO60318 1980 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 CCDC194A0A1B0GVG4 234 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 NFIBO00712 420 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 MAFGO15525 162 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 TBC1D8O95759 1140 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 BMP15O95972 392 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 CYP3A4P08684 503 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 CCNYL3P0C7X3 344 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 VSIG8P0DPA2 414 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 CAPN2P17655 700 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 SYT1P21579 422 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 EDNRBP24530 442 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 ADORA2AP29274 412 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 DDIT3P35638 169 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 CTCFP49711 727 aaPredicted RBP7.66□□□□□ -1.18
UPF3B-205ENST00000636792 SETQ01105 290 aaPredicted RBP7.66□□□□□ -1.18
UPF3B-205ENST00000636792 GUCA2AQ02747 115 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 GNL2Q13823 731 aaKnown RBP7.66□□□□□ -1.18
UPF3B-205ENST00000636792 NONOQ15233 471 aaKnown RBP eCLIP7.66□□□□□ -1.18
UPF3B-205ENST00000636792 PKN2Q16513 984 aaKnown RBP7.66□□□□□ -1.18
UPF3B-205ENST00000636792 RILPL1Q5EBL4 403 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 MUM1L1Q5H9M0 696 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 PCNX4Q63HM2 1172 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 KCNV1Q6PIU1 500 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 MAMDC4Q6UXC1 1216 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 NSMFQ6X4W1 530 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 NIPA1Q7RTP0 329 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 NOSTRINQ8IVI9 506 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 SYTL5Q8TDW5 730 aaPredicted RBP7.66□□□□□ -1.18
UPF3B-205ENST00000636792 USP6NLQ92738 828 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 SYMPKQ92797 1274 aaKnown RBP7.66□□□□□ -1.18
UPF3B-205ENST00000636792 CDHR1Q96JP9 859 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 ANO3Q9BYT9 981 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 EFCC1Q9HA90 598 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 HOMER2Q9NSB8 354 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 NOL7Q9UMY1 257 aaKnown RBP7.66□□□□□ -1.18
UPF3B-205ENST00000636792 RIPK3Q9Y572 518 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 FRMPD3Q5JV73 1810 aa7.66□□□□□ -1.18
UPF3B-205ENST00000636792 hCG_1642624A0A1W2PR95 340 aa7.65□□□□□ -1.18
UPF3B-205ENST00000636792 LAD1O00515 517 aa7.65□□□□□ -1.18
UPF3B-205ENST00000636792 CIITAP33076 1130 aa7.65□□□□□ -1.18
UPF3B-205ENST00000636792 PSMC4P43686 418 aa7.65□□□□□ -1.18
UPF3B-205ENST00000636792 ALDH5A1P51649 535 aaPredicted RBP7.65□□□□□ -1.18
UPF3B-205ENST00000636792 USP11P51784 963 aa7.65□□□□□ -1.18
UPF3B-205ENST00000636792 BAATQ14032 418 aaPredicted RBP7.65□□□□□ -1.18
UPF3B-205ENST00000636792 ZNF792Q3KQV3 632 aa7.65□□□□□ -1.18
UPF3B-205ENST00000636792 PPP4R3AQ6IN85 833 aa7.65□□□□□ -1.18
UPF3B-205ENST00000636792 SLC30A10Q6XR72 485 aa7.65□□□□□ -1.18
UPF3B-205ENST00000636792 NEK8Q86SG6 692 aa7.65□□□□□ -1.18
UPF3B-205ENST00000636792 ZNF296Q8WUU4 475 aaPredicted RBP7.65□□□□□ -1.18
UPF3B-205ENST00000636792 CRYGNQ8WXF5 182 aa7.65□□□□□ -1.18
UPF3B-205ENST00000636792 PIBF1Q8WXW3 757 aa7.65□□□□□ -1.18
UPF3B-205ENST00000636792 TNFRSF25Q93038 417 aa7.65□□□□□ -1.18
UPF3B-205ENST00000636792 AIFM3Q96NN9 605 aa7.65□□□□□ -1.18
UPF3B-205ENST00000636792 PDCD2LQ9BRP1 358 aa7.65□□□□□ -1.18
UPF3B-205ENST00000636792 VTA1Q9NP79 307 aa7.65□□□□□ -1.18
UPF3B-205ENST00000636792 PXMP2Q9NR77 195 aa7.65□□□□□ -1.18
UPF3B-205ENST00000636792 SRRDQ9UH36 339 aa7.65□□□□□ -1.18
UPF3B-205ENST00000636792 VPS37CA5D8V6 355 aaPredicted RBP7.64□□□□□ -1.19
UPF3B-205ENST00000636792 TBX3O15119 743 aa7.64□□□□□ -1.19
UPF3B-205ENST00000636792 BRD1O95696 1058 aa7.64□□□□□ -1.19
UPF3B-205ENST00000636792 F13A1P00488 732 aa7.64□□□□□ -1.19
UPF3B-205ENST00000636792 HSPA1AP0DMV8 641 aaKnown RBP7.64□□□□□ -1.19
UPF3B-205ENST00000636792 HSPA1BP0DMV9 641 aaKnown RBP7.64□□□□□ -1.19
UPF3B-205ENST00000636792 ZSCAN22P10073 491 aaPredicted RBP7.64□□□□□ -1.19
UPF3B-205ENST00000636792 TGFB3P10600 412 aa7.64□□□□□ -1.19
UPF3B-205ENST00000636792 CCND2P30279 289 aa7.64□□□□□ -1.19
UPF3B-205ENST00000636792 SNAP25P60880 206 aa7.64□□□□□ -1.19
UPF3B-205ENST00000636792 KCNMA1Q12791 1236 aa7.64□□□□□ -1.19
UPF3B-205ENST00000636792 NNTQ13423 1086 aa7.64□□□□□ -1.19
UPF3B-205ENST00000636792 PGM5Q15124 567 aa7.64□□□□□ -1.19
UPF3B-205ENST00000636792 GNPTABQ3T906 1256 aa7.64□□□□□ -1.19
UPF3B-205ENST00000636792 WDR78Q5VTH9 848 aa7.64□□□□□ -1.19
UPF3B-205ENST00000636792 ARHGEF16Q5VV41 709 aa7.64□□□□□ -1.19
UPF3B-205ENST00000636792 DPP9Q86TI2 863 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms