RNA–Protein interactions for RNA: ENST00000636616.1

EFHC1-223, Transcript of EF-hand domain containing 1, human

TSL 5

Gene EFHC1, Length 1,636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFHC1-223	ENST00000636616	ANLN	Q9NQW6	1124 aa		6.11	□□□□□ -1.43
EFHC1-223	ENST00000636616	NDOR1	Q9UHB4	597 aa		6.11	□□□□□ -1.43
EFHC1-223	ENST00000636616	DDX20	Q9UHI6	824 aa	Known RBP	6.11	□□□□□ -1.43
EFHC1-223	ENST00000636616	FAM50B	Q9Y247	325 aa		6.11	□□□□□ -1.43
EFHC1-223	ENST00000636616	KDM5D	Q9BY66	1539 aa		6.11	□□□□□ -1.43
EFHC1-223	ENST00000636616	DEPDC5	O75140	1603 aa		6.11	□□□□□ -1.43
EFHC1-223	ENST00000636616	OPA1	O60313	960 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	ZEB2	O60315	1214 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	ASL	P04424	464 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	HSP90AA1	P07900	732 aa	Known RBP	6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	JMJD7	P0C870	316 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	PF4V1	P10720	104 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	POLR2B	P30876	1174 aa	Known RBP	6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	GBP1	P32455	592 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	TXK	P42681	527 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	CPSF6	Q16630	551 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	SKOR2	Q2VWA4	1001 aa	Predicted RBP	6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	ALF	Q53S48	1182 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	CCDC70	Q6NSX1	233 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	GJA10	Q969M2	543 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	TRMT2B	Q96GJ1	504 aa	Known RBP	6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	SCLY	Q96I15	445 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	HEXIM2	Q96MH2	286 aa	Known RBP	6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	NEUROD6	Q96NK8	337 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	HERPUD2	Q9BSE4	406 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	LGR4	Q9BXB1	951 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	PNMA8B	Q9ULN7	279 aa	Predicted RBP	6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	TPX2	Q9ULW0	747 aa	Known RBP	6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	IPP	Q9Y573	584 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	RAB3GAP2	Q9H2M9	1393 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	RNF17	Q9BXT8	1623 aa	Known RBP	6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	CNTLN	Q9NXG0	1405 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	CNTNAP4	Q9C0A0	1308 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	VWDE	Q8N2E2	1590 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	KANK1	Q14678	1352 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616		M0R2C6	588 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	PRODH	O43272	600 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	NBN	O60934	754 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	UBOX5	O94941	541 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	PYGM	P11217	842 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	LPO	P22079	712 aa	Predicted RBP	6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	SARS	P49591	514 aa	Known RBP	6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	ZNF143	P52747	638 aa	Predicted RBP	6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	INAVA	Q3KP66	663 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	ATXN2L	Q8WWM7	1075 aa	Known RBP	6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	CLIP3	Q96DZ5	547 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	FUBP3	Q96I24	572 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	MENT	Q9BUN1	341 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	ZFP64	Q9NPA5	681 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	DDX21	Q9NR30	783 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	GTF2IRD1	Q9UHL9	959 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	PHTF1	Q9UMS5	762 aa		6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	APOBEC2	Q9Y235	224 aa	Known RBP	6.1	□□□□□ -1.43
EFHC1-223	ENST00000636616	PRDM15	P57071	1507 aa	Predicted RBP	6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616	LMTK2	Q8IWU2	1503 aa		6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616	ARHGAP31	Q2M1Z3	1444 aa		6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616		K7ESF4	209 aa		6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616	ITGAV	P06756	1048 aa		6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616	MYBL2	P10244	700 aa		6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616	ETV3	P41162	512 aa		6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616	IARS	P41252	1262 aa	Known RBP	6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616	GGT6	Q6P531	493 aa		6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616	NSMF	Q6X4W1	530 aa		6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616	ZNF227	Q86WZ6	799 aa		6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616	CPA6	Q8N4T0	437 aa		6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616	SLC13A1	Q9BZW2	595 aa		6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616	PRDM5	Q9NQX1	630 aa	Predicted RBP	6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616	PIM2	Q9P1W9	311 aa		6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616	GTF2A1L	Q9UNN4	478 aa		6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616	ANKRD6	Q9Y2G4	727 aa		6.09	□□□□□ -1.43
EFHC1-223	ENST00000636616	UNC13B	O14795	1591 aa		6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	NUP155	O75694	1391 aa		6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	ANKRD34B	A5PLL1	514 aa		6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	RBAK-RBAKDN	I3L0D1	243 aa		6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	IGF2BP3	O00425	579 aa	Known RBP eCLIP	6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	PMM2	O15305	246 aa		6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	TGFB1	P01137	390 aa		6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	TYRP1	P17643	537 aa		6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	CYP7A1	P22680	504 aa		6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	IGFALS	P35858	605 aa		6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	PPM1F	P49593	454 aa	Predicted RBP	6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	CFAP100	Q494V2	611 aa		6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	SFRP5	Q5T4F7	317 aa		6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	PPFIBP1	Q86W92	1011 aa		6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	IFNL2	Q8IZJ0	200 aa		6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	OR2W6P	Q8NHA6	318 aa		6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	PARD3B	Q8TEW8	1205 aa		6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	APEX2	Q9UBZ4	518 aa		6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	FRMPD2	Q68DX3	1309 aa	Predicted RBP	6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	RPRD2	Q5VT52	1461 aa	Known RBP	6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	MROH1	Q8NDA8	1641 aa		6.08	□□□□□ -1.44
EFHC1-223	ENST00000636616	ZC3H13	Q5T200	1668 aa	Known RBP	6.07	□□□□□ -1.44
EFHC1-223	ENST00000636616	CYP26A1	O43174	497 aa		6.07	□□□□□ -1.44
EFHC1-223	ENST00000636616	TBX1	O43435	398 aa		6.07	□□□□□ -1.44
EFHC1-223	ENST00000636616	SNUPN	O95149	360 aa	Known RBP	6.07	□□□□□ -1.44
EFHC1-223	ENST00000636616	ASGR2	P07307	311 aa		6.07	□□□□□ -1.44
EFHC1-223	ENST00000636616	ECE1	P42892	770 aa		6.07	□□□□□ -1.44
EFHC1-223	ENST00000636616	ERVK-21	P61565	698 aa		6.07	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms