RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 MTMR3Q13615 1198 aa17.42■□□□□ 0.38
CLN5-208ENST00000636183 STXBP2Q15833 593 aa17.42■□□□□ 0.38
CLN5-208ENST00000636183 SLC27A3Q5K4L6 730 aa17.42■□□□□ 0.38
CLN5-208ENST00000636183 APOBEC3FQ8IUX4 373 aaKnown RBP17.42■□□□□ 0.38
CLN5-208ENST00000636183 CARD6Q9BX69 1037 aa17.42■□□□□ 0.38
CLN5-208ENST00000636183 K7ERI5 159 aa17.42■□□□□ 0.38
CLN5-208ENST00000636183 CTTNQ14247 550 aaKnown RBP17.42■□□□□ 0.38
CLN5-208ENST00000636183 SPECC1L-ADORA2AF8WAN1 911 aa17.42■□□□□ 0.38
CLN5-208ENST00000636183 DNAJC24Q6P3W2 148 aa17.42■□□□□ 0.38
CLN5-208ENST00000636183 LZICQ8WZA0 190 aa17.42■□□□□ 0.38
CLN5-208ENST00000636183 ELP3Q9H9T3 547 aa17.42■□□□□ 0.38
CLN5-208ENST00000636183 TRIM35Q9UPQ4 493 aa17.42■□□□□ 0.38
CLN5-208ENST00000636183 MCF2LO15068 1137 aa17.42■□□□□ 0.38
CLN5-208ENST00000636183 VCPP55072 806 aaKnown RBP17.42■□□□□ 0.38
CLN5-208ENST00000636183 CROCCP2Q86T23 111 aa17.42■□□□□ 0.38
CLN5-208ENST00000636183 IFT43Q96FT9 208 aa17.42■□□□□ 0.38
CLN5-208ENST00000636183 CLIC6Q96NY7 704 aa17.42■□□□□ 0.38
CLN5-208ENST00000636183 CHL1O00533 1208 aa17.41■□□□□ 0.38
CLN5-208ENST00000636183 HSPD1P10809 573 aaKnown RBP17.41■□□□□ 0.38
CLN5-208ENST00000636183 SNX21Q969T3 373 aa17.41■□□□□ 0.38
CLN5-208ENST00000636183 TTC4O95801 387 aa17.41■□□□□ 0.38
CLN5-208ENST00000636183 TEKT4Q8WW24 435 aa17.41■□□□□ 0.38
CLN5-208ENST00000636183 SYMPKQ92797 1274 aaKnown RBP17.41■□□□□ 0.38
CLN5-208ENST00000636183 RSRC1Q96IZ7 334 aaKnown RBP17.41■□□□□ 0.38
CLN5-208ENST00000636183 BLVRAP53004 296 aa17.41■□□□□ 0.38
CLN5-208ENST00000636183 TBCKQ8TEA7 893 aa17.41■□□□□ 0.38
CLN5-208ENST00000636183 VCX3AQ9NNX9 186 aa17.41■□□□□ 0.38
CLN5-208ENST00000636183 NR2F2P24468 414 aa17.41■□□□□ 0.38
CLN5-208ENST00000636183 ZNF827Q17R98 1081 aa17.41■□□□□ 0.38
CLN5-208ENST00000636183 ASIC4Q96FT7 647 aa17.41■□□□□ 0.38
CLN5-208ENST00000636183 COA1Q9GZY4 146 aa17.41■□□□□ 0.38
CLN5-208ENST00000636183 FCER1AP12319 257 aa17.41■□□□□ 0.38
CLN5-208ENST00000636183 TCP11Q8WWU5 503 aa17.41■□□□□ 0.38
CLN5-208ENST00000636183 MX2P20592 715 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 CTNNA1P35221 906 aaKnown RBP17.4■□□□□ 0.38
CLN5-208ENST00000636183 BLMP54132 1417 aaPredicted RBP17.4■□□□□ 0.38
CLN5-208ENST00000636183 TTC19Q6DKK2 380 aaPredicted RBP17.4■□□□□ 0.38
CLN5-208ENST00000636183 UBE2TQ9NPD8 197 aaPredicted RBP17.4■□□□□ 0.38
CLN5-208ENST00000636183 ASNSP08243 561 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 BASP1P80723 227 aaKnown RBP17.4■□□□□ 0.38
CLN5-208ENST00000636183 FAM186BQ8IYM0 893 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 PCDHA4Q9UN74 947 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 A0A0D9SFI3 127 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 RSPH10B2B2RC85 870 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 RSPH10BP0C881 870 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 VEPH1Q14D04 833 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 DNAJC7Q99615 494 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 ZWILCHQ9H900 591 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 TLK1Q9UKI8 766 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 ERBB3P21860 1342 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 RBM6P78332 1123 aaKnown RBP17.4■□□□□ 0.38
CLN5-208ENST00000636183 SPOPLQ6IQ16 392 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 TYW1Q9NV66 732 aaKnown RBP17.4■□□□□ 0.38
CLN5-208ENST00000636183 BTBD18B2RXH4 712 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 GRIN3BO60391 1043 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 EVI5O60447 810 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 THEMIS2Q5TEJ8 643 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 CBX8Q9HC52 389 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 ZNF394Q53GI3 561 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 RHPN2Q8IUC4 686 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 POLR3EQ9NVU0 708 aa17.4■□□□□ 0.38
CLN5-208ENST00000636183 TTLL4Q14679 1199 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 SERPIND1P05546 499 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 PFKFB1P16118 471 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 U2AF2P26368 475 aaKnown RBP eCLIP17.39■□□□□ 0.37
CLN5-208ENST00000636183 TRAPPC10P48553 1259 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 KIAA1755Q5JYT7 1200 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 SLC10A5Q5PT55 438 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 FAM196BA6NMK8 535 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 USP17L5A8MUK1 530 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 RNF40O75150 1001 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 GAP43P17677 238 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 PALLDQ8WX93 1383 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 HUS1O60921 280 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 PHEXP78562 749 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 CYP27A1Q02318 531 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 LARP4BQ92615 738 aaKnown RBP17.39■□□□□ 0.37
CLN5-208ENST00000636183 EXOC4Q96A65 974 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 MLH3Q9UHC1 1453 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 TMEM247A6NEH6 219 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 EEF1GP26641 437 aaKnown RBP17.39■□□□□ 0.37
CLN5-208ENST00000636183 GTF2A1P52655 376 aaPredicted RBP17.39■□□□□ 0.37
CLN5-208ENST00000636183 PEX3P56589 373 aa17.39■□□□□ 0.37
CLN5-208ENST00000636183 PRAG1Q86YV5 1406 aa17.38■□□□□ 0.37
CLN5-208ENST00000636183 CYP2D7A0A087X1C5 515 aa17.38■□□□□ 0.37
CLN5-208ENST00000636183 PRKAB2O43741 272 aa17.38■□□□□ 0.37
CLN5-208ENST00000636183 MOCS2O96007 188 aaPredicted RBP17.38■□□□□ 0.37
CLN5-208ENST00000636183 LMNTD2Q8IXW0 634 aa17.38■□□□□ 0.37
CLN5-208ENST00000636183 G3BP2Q9UN86 482 aaKnown RBP17.38■□□□□ 0.37
CLN5-208ENST00000636183 CTSHP09668 335 aa17.38■□□□□ 0.37
CLN5-208ENST00000636183 HADHAP40939 763 aa17.38■□□□□ 0.37
CLN5-208ENST00000636183 PDCD7Q8N8D1 485 aaKnown RBP17.38■□□□□ 0.37
CLN5-208ENST00000636183 IL17REQ8NFR9 667 aa17.38■□□□□ 0.37
CLN5-208ENST00000636183 TMEM206Q9H813 350 aa17.38■□□□□ 0.37
CLN5-208ENST00000636183 TUBBP07437 444 aa17.38■□□□□ 0.37
CLN5-208ENST00000636183 TRIM67Q6ZTA4 783 aa17.38■□□□□ 0.37
CLN5-208ENST00000636183 RMDN3Q96TC7 470 aa17.38■□□□□ 0.37
CLN5-208ENST00000636183 SERPINB6P35237 376 aa17.38■□□□□ 0.37
CLN5-208ENST00000636183 MECOMQ03112 1051 aa17.38■□□□□ 0.37
CLN5-208ENST00000636183 TTC23LQ6PF05 361 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms