RNA–Protein interactions for RNA: ENST00000635988.1

CACNA1A-220, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-220ENST00000635988 DONSONQ9NYP3 566 aa16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 SLC12A6Q9UHW9 1150 aa16.27■□□□□ 0.2
CACNA1A-220ENST00000635988 TRAPPC3O43617 180 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 TLR2O60603 784 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 FXR2P51116 673 aaKnown RBP eCLIP16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 SOGA3Q5TF21 947 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 MAGEC3Q8TD91 643 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 CEP63Q96MT8 703 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 NIP7Q9Y221 180 aaKnown RBP eCLIP16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 LAMB2P55268 1798 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 KIAA1551Q9HCM1 1747 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 SMCO2A6NFE2 343 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 PAEPP09466 180 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 CTNNA1P35221 906 aaKnown RBP16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 DNA2P51530 1060 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 ATP2B2Q01814 1243 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 SLC35G1Q2M3R5 365 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 C12orf60Q5U649 245 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 TMC4Q7Z404 712 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 KLHL7Q8IXQ5 586 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 MYOCDQ8IZQ8 938 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 ACTRT1Q8TDG2 376 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 SCFD2Q8WU76 684 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 CCDC87Q9NVE4 849 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 AIPL1Q9NZN9 384 aa16.26■□□□□ 0.19
CACNA1A-220ENST00000635988 SCN7AQ01118 1682 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 H0YGN5 161 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 NOL4O94818 638 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 CAMTA2O94983 1202 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 POLR2FP61218 127 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 SNCBQ16143 134 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 WLSQ5T9L3 541 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 BRINP3Q76B58 766 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 DYMQ7RTS9 669 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 LSM14BQ9BX40 385 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 CENPHQ9H3R5 247 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 MKNK2Q9HBH9 465 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 CD248Q9HCU0 757 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 NFS1Q9Y697 457 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 C5orf60A6NFR6 353 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 CCDC188H7C350 402 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 TXKP42681 527 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 USP11P51784 963 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 ERVK-9P63128 1117 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 IFFO1Q0D2I5 559 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 KLHL30Q0D2K2 578 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 PDIA5Q14554 519 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 TBCKQ8TEA7 893 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 RAD54LQ92698 747 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 PNMA5Q96PV4 448 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 POLD4Q9HCU8 107 aa16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 DDX20Q9UHI6 824 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-220ENST00000635988 KLRF2D3W0D1 207 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 KCNK3O14649 394 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 TSPY3P0CV98 308 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 TSPY8P0CW00 308 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 PPP2R2AP63151 447 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 ZNF844Q08AG5 666 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 ASIC2Q16515 512 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 CACNA2D3Q8IZS8 1091 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 MTMR9Q96QG7 549 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 A0A087X0T9 212 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 BHMG1C9JSJ3 638 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 TRAF5O00463 557 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 KIF4AO95239 1232 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 FAM228BP0C875 321 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 SMARCA1P28370 1054 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 ECHS1P30084 290 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 NF2P35240 595 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 MARSP56192 900 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 CALCRLQ16602 461 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 ZCWPW2Q504Y3 356 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 LACTB2Q53H82 288 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 ODF2Q5BJF6 829 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 GPIHBP1Q8IV16 184 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 ZNF444Q8N0Y2 327 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 SWAP70Q9UH65 585 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 MCM8Q9UJA3 840 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 MINPP1Q9UNW1 487 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 CEP83Q9Y592 693 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 ROBO3Q96MS0 1386 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 PHLPP1O60346 1717 aa16.24■□□□□ 0.19
CACNA1A-220ENST00000635988 ESYT2A0FGR8 921 aa16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 ZPR1O75312 459 aa16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 USP17L8P0C7I0 530 aa16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 RAPGEF1Q13905 1077 aa16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 SF3B3Q15393 1217 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 TRADDQ15628 312 aa16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 KRT79Q5XKE5 535 aa16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 INTS5Q6P9B9 1019 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 PARP9Q8IXQ6 854 aa16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 REXO1Q8N1G1 1221 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 DDX12PQ92771 950 aa16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 SGSM3Q96HU1 749 aa16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 SEC63Q9UGP8 760 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 ADAMTS1Q9UHI8 967 aa16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 BZW2Q9Y6E2 419 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-220ENST00000635988 PGRMC1O00264 195 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms