RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 CYP46A1Q9Y6A2 500 aa20.93■□□□□ 0.94
CLN6-210ENST00000635747 NID2Q14112 1375 aa20.93■□□□□ 0.94
CLN6-210ENST00000635747 AKAP17AQ02040 695 aaKnown RBP20.92■□□□□ 0.94
CLN6-210ENST00000635747 PTK7Q13308 1070 aa20.92■□□□□ 0.94
CLN6-210ENST00000635747 AP3B2Q13367 1082 aa20.92■□□□□ 0.94
CLN6-210ENST00000635747 PFKFB3Q16875 520 aaPredicted RBP20.92■□□□□ 0.94
CLN6-210ENST00000635747 MCTP2Q6DN12 878 aa20.92■□□□□ 0.94
CLN6-210ENST00000635747 OTOP2Q7RTS6 562 aa20.92■□□□□ 0.94
CLN6-210ENST00000635747 GPR20Q99678 358 aa20.92■□□□□ 0.94
CLN6-210ENST00000635747 TM6SF1Q9BZW5 370 aa20.92■□□□□ 0.94
CLN6-210ENST00000635747 UBIAD1Q9Y5Z9 338 aa20.92■□□□□ 0.94
CLN6-210ENST00000635747 EIF5BO60841 1220 aaKnown RBP20.91■□□□□ 0.94
CLN6-210ENST00000635747 LGALS2P05162 132 aa20.91■□□□□ 0.94
CLN6-210ENST00000635747 SCG2P13521 617 aa20.91■□□□□ 0.94
CLN6-210ENST00000635747 DNAJB2P25686 324 aa20.91■□□□□ 0.94
CLN6-210ENST00000635747 EVCP57679 992 aa20.91■□□□□ 0.94
CLN6-210ENST00000635747 RBL2Q08999 1139 aa20.91■□□□□ 0.94
CLN6-210ENST00000635747 MTMR1Q13613 665 aa20.91■□□□□ 0.94
CLN6-210ENST00000635747 FAM161BQ96MY7 647 aa20.91■□□□□ 0.94
CLN6-210ENST00000635747 JADE2Q9NQC1 790 aa20.91■□□□□ 0.94
CLN6-210ENST00000635747 ZNF215Q9UL58 517 aaPredicted RBP20.91■□□□□ 0.94
CLN6-210ENST00000635747 SLC4A7Q9Y6M7 1214 aa20.91■□□□□ 0.94
CLN6-210ENST00000635747 MYH7BA7E2Y1 1941 aa20.9■□□□□ 0.94
CLN6-210ENST00000635747 PRPF3O43395 683 aaKnown RBP20.9■□□□□ 0.94
CLN6-210ENST00000635747 GNAT1P11488 350 aa20.9■□□□□ 0.94
CLN6-210ENST00000635747 SELPP16109 830 aa20.9■□□□□ 0.94
CLN6-210ENST00000635747 ITGB5P18084 799 aa20.9■□□□□ 0.94
CLN6-210ENST00000635747 RAB30Q15771 203 aa20.9■□□□□ 0.94
CLN6-210ENST00000635747 TYW1BQ6NUM6 668 aa20.9■□□□□ 0.94
CLN6-210ENST00000635747 DEFB128Q7Z7B8 93 aa20.9■□□□□ 0.94
CLN6-210ENST00000635747 TIFAQ96CG3 184 aa20.9■□□□□ 0.94
CLN6-210ENST00000635747 BCAS3Q9H6U6 928 aa20.9■□□□□ 0.94
CLN6-210ENST00000635747 MSRAQ9UJ68 235 aa20.9■□□□□ 0.94
CLN6-210ENST00000635747 KCNA2P16389 499 aa20.89■□□□□ 0.93
CLN6-210ENST00000635747 SEPT1Q8WYJ6 367 aa20.89■□□□□ 0.93
CLN6-210ENST00000635747 GUCD1Q96NT3 240 aa20.89■□□□□ 0.93
CLN6-210ENST00000635747 CTAGE1Q96RT6 745 aa20.89■□□□□ 0.93
CLN6-210ENST00000635747 MXRA8Q9BRK3 442 aa20.89■□□□□ 0.93
CLN6-210ENST00000635747 FTOQ9C0B1 505 aaKnown RBP eCLIP20.89■□□□□ 0.93
CLN6-210ENST00000635747 CXXC1Q9P0U4 656 aaPredicted RBP20.89■□□□□ 0.93
CLN6-210ENST00000635747 ESYT2A0FGR8 921 aa20.88■□□□□ 0.93
CLN6-210ENST00000635747 C17orf102A2RUQ5 167 aa20.88■□□□□ 0.93
CLN6-210ENST00000635747 ZBBXA8MT70 800 aa20.88■□□□□ 0.93
CLN6-210ENST00000635747 CKBP12277 381 aa20.88■□□□□ 0.93
CLN6-210ENST00000635747 GNA11P29992 359 aa20.88■□□□□ 0.93
CLN6-210ENST00000635747 PDIA3P30101 505 aaKnown RBP20.88■□□□□ 0.93
CLN6-210ENST00000635747 CLK2P49760 499 aaKnown RBP20.88■□□□□ 0.93
CLN6-210ENST00000635747 LRRC8DQ7L1W4 858 aa20.88■□□□□ 0.93
CLN6-210ENST00000635747 VWCEQ96DN2 955 aa20.88■□□□□ 0.93
CLN6-210ENST00000635747 RNF26Q9BY78 433 aaPredicted RBP20.88■□□□□ 0.93
CLN6-210ENST00000635747 ANO3Q9BYT9 981 aa20.88■□□□□ 0.93
CLN6-210ENST00000635747 PBX4Q9BYU1 374 aa20.88■□□□□ 0.93
CLN6-210ENST00000635747 TTYH1Q9H313 450 aaPredicted RBP20.88■□□□□ 0.93
CLN6-210ENST00000635747 C6orf50Q9HD87 102 aa20.88■□□□□ 0.93
CLN6-210ENST00000635747 ATP9AO75110 1047 aa20.87■□□□□ 0.93
CLN6-210ENST00000635747 SMIM10L2AP0DMW4 78 aa20.87■□□□□ 0.93
CLN6-210ENST00000635747 SMIM10L2BP0DMW5 78 aa20.87■□□□□ 0.93
CLN6-210ENST00000635747 IFNAR1P17181 557 aa20.87■□□□□ 0.93
CLN6-210ENST00000635747 SREBF1P36956 1147 aa20.87■□□□□ 0.93
CLN6-210ENST00000635747 CEP55Q53EZ4 464 aa20.87■□□□□ 0.93
CLN6-210ENST00000635747 DHX38Q92620 1227 aaKnown RBP20.87■□□□□ 0.93
CLN6-210ENST00000635747 ATP6V0A1Q93050 837 aa20.87■□□□□ 0.93
CLN6-210ENST00000635747 ZNF274Q96GC6 653 aaPredicted RBP20.87■□□□□ 0.93
CLN6-210ENST00000635747 CDX2Q99626 313 aaPredicted RBP20.87■□□□□ 0.93
CLN6-210ENST00000635747 ZMYND12Q9H0C1 365 aa20.87■□□□□ 0.93
CLN6-210ENST00000635747 ZNF576Q9H609 170 aa20.87■□□□□ 0.93
CLN6-210ENST00000635747 A0A0C4DFX4 3053 aa20.86■□□□□ 0.93
CLN6-210ENST00000635747 BAIAP3O94812 1187 aa20.86■□□□□ 0.93
CLN6-210ENST00000635747 HOXC8P31273 242 aa20.86■□□□□ 0.93
CLN6-210ENST00000635747 TCF7P36402 384 aaPredicted RBP20.86■□□□□ 0.93
CLN6-210ENST00000635747 ZNF76P36508 570 aa20.86■□□□□ 0.93
CLN6-210ENST00000635747 SP4Q02446 784 aa20.86■□□□□ 0.93
CLN6-210ENST00000635747 NTRK3Q16288 839 aa20.86■□□□□ 0.93
CLN6-210ENST00000635747 UTP14CQ5TAP6 766 aaKnown RBP20.86■□□□□ 0.93
CLN6-210ENST00000635747 NIPA1Q7RTP0 329 aa20.86■□□□□ 0.93
CLN6-210ENST00000635747 SERINC5Q86VE9 423 aa20.86■□□□□ 0.93
CLN6-210ENST00000635747 PHOSPHO2Q8TCD6 241 aa20.86■□□□□ 0.93
CLN6-210ENST00000635747 BICD2Q8TD16 824 aa20.86■□□□□ 0.93
CLN6-210ENST00000635747 KCNH7Q9NS40 1196 aa20.86■□□□□ 0.93
CLN6-210ENST00000635747 GRXCR1A8MXD5 290 aa20.85■□□□□ 0.93
CLN6-210ENST00000635747 ATP2A2P16615 1042 aaKnown RBP20.85■□□□□ 0.93
CLN6-210ENST00000635747 TOB2Q14106 344 aaPredicted RBP20.85■□□□□ 0.93
CLN6-210ENST00000635747 PKN1Q16512 942 aa20.85■□□□□ 0.93
CLN6-210ENST00000635747 CPLX2Q6PUV4 134 aaKnown RBP20.85■□□□□ 0.93
CLN6-210ENST00000635747 TRIM22Q8IYM9 498 aa20.85■□□□□ 0.93
CLN6-210ENST00000635747 CCDC148Q8NFR7 591 aa20.85■□□□□ 0.93
CLN6-210ENST00000635747 PHKBQ93100 1093 aa20.85■□□□□ 0.93
CLN6-210ENST00000635747 SDF4Q9BRK5 362 aa20.85■□□□□ 0.93
CLN6-210ENST00000635747 SLC26A6Q9BXS9 759 aa20.85■□□□□ 0.93
CLN6-210ENST00000635747 RNPEPQ9H4A4 650 aa20.85■□□□□ 0.93
CLN6-210ENST00000635747 NFASCO94856 1347 aa20.84■□□□□ 0.93
CLN6-210ENST00000635747 NRCAMQ92823 1304 aa20.84■□□□□ 0.93
CLN6-210ENST00000635747 MEIS1O00470 390 aa20.84■□□□□ 0.93
CLN6-210ENST00000635747 CPLX1O14810 134 aa20.84■□□□□ 0.93
CLN6-210ENST00000635747 CAND2O75155 1236 aa20.84■□□□□ 0.93
CLN6-210ENST00000635747 CXCL10P02778 98 aa20.84■□□□□ 0.93
CLN6-210ENST00000635747 ANAPC15P60006 121 aa20.84■□□□□ 0.93
CLN6-210ENST00000635747 CCT2P78371 535 aaKnown RBP20.84■□□□□ 0.93
CLN6-210ENST00000635747 ARHGAP4P98171 946 aa20.84■□□□□ 0.93
CLN6-210ENST00000635747 ZNF200P98182 395 aaPredicted RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms