RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 DGKDQ16760 1214 aa11.08□□□□□ -0.64
LINC00339-210ENST00000635675 TRIM60Q495X7 471 aa11.08□□□□□ -0.64
LINC00339-210ENST00000635675 PLA2G4DQ86XP0 818 aa11.08□□□□□ -0.64
LINC00339-210ENST00000635675 TNFRSF25Q93038 417 aa11.08□□□□□ -0.64
LINC00339-210ENST00000635675 VTI1AQ96AJ9 217 aa11.08□□□□□ -0.64
LINC00339-210ENST00000635675 LENG9Q96B70 501 aa11.08□□□□□ -0.64
LINC00339-210ENST00000635675 C8orf76Q96K31 380 aa11.08□□□□□ -0.64
LINC00339-210ENST00000635675 MTG1Q9BT17 334 aaPredicted RBP11.08□□□□□ -0.64
LINC00339-210ENST00000635675 AGO4Q9HCK5 861 aaKnown RBP11.08□□□□□ -0.64
LINC00339-210ENST00000635675 TELO2Q9Y4R8 837 aa11.08□□□□□ -0.64
LINC00339-210ENST00000635675 NR2E3Q9Y5X4 410 aa11.08□□□□□ -0.64
LINC00339-210ENST00000635675 CYP3A7-CYP3A51PA0A087WV96 503 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 A0A0U1RQG5 324 aaPredicted RBP11.07□□□□□ -0.64
LINC00339-210ENST00000635675 CCDC194A0A1B0GVG4 234 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 BTBD18B2RXH4 712 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 CYP3A7P24462 503 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 FOSBP53539 338 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 PSMC6P62333 389 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 TLE2Q04725 743 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 ITGB3BPQ13352 177 aaPredicted RBP11.07□□□□□ -0.64
LINC00339-210ENST00000635675 CUL4AQ13619 759 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 ITGA7Q13683 1181 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 INF2Q27J81 1249 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 EARS2Q5JPH6 523 aaKnown RBP11.07□□□□□ -0.64
LINC00339-210ENST00000635675 ANKRD33Q7Z3H0 272 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 DIS3L2Q8IYB7 885 aaKnown RBP11.07□□□□□ -0.64
LINC00339-210ENST00000635675 FAM184AQ8NB25 1140 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 FBXO18Q8NFZ0 1043 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 KAT2BQ92831 832 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 TOX2Q96NM4 488 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 GPR20Q99678 358 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 RNF39Q9H2S5 420 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 BRMS1Q9HCU9 246 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 PKD2L1Q9P0L9 805 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 ATP11BQ9Y2G3 1177 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 SCN10AQ9Y5Y9 1956 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 CEP290O15078 2479 aa11.07□□□□□ -0.64
LINC00339-210ENST00000635675 NFASCO94856 1347 aa11.06□□□□□ -0.64
LINC00339-210ENST00000635675 DHX15O43143 795 aaKnown RBP11.06□□□□□ -0.64
LINC00339-210ENST00000635675 GUCY1B3Q02153 619 aa11.06□□□□□ -0.64
LINC00339-210ENST00000635675 Q4G0T1 1027 aa11.06□□□□□ -0.64
LINC00339-210ENST00000635675 PRR16Q569H4 304 aa11.06□□□□□ -0.64
LINC00339-210ENST00000635675 MOXD1Q6UVY6 613 aa11.06□□□□□ -0.64
LINC00339-210ENST00000635675 PIK3AP1Q6ZUJ8 805 aa11.06□□□□□ -0.64
LINC00339-210ENST00000635675 C7orf61Q8IZ16 206 aa11.06□□□□□ -0.64
LINC00339-210ENST00000635675 SNX21Q969T3 373 aa11.06□□□□□ -0.64
LINC00339-210ENST00000635675 MBOAT7Q96N66 472 aa11.06□□□□□ -0.64
LINC00339-210ENST00000635675 C16orf70Q9BSU1 422 aa11.06□□□□□ -0.64
LINC00339-210ENST00000635675 SEZ6LQ9BYH1 1024 aa11.06□□□□□ -0.64
LINC00339-210ENST00000635675 GSTTP1A0A1W2PQM5 241 aa11.05□□□□□ -0.64
LINC00339-210ENST00000635675 FAM205CA6NFA0 338 aa11.05□□□□□ -0.64
LINC00339-210ENST00000635675 H0YGN5 161 aa11.05□□□□□ -0.64
LINC00339-210ENST00000635675 HAS3O00219 553 aa11.05□□□□□ -0.64
LINC00339-210ENST00000635675 IPO5O00410 1097 aaKnown RBP11.05□□□□□ -0.64
LINC00339-210ENST00000635675 NOP56O00567 594 aaKnown RBP11.05□□□□□ -0.64
LINC00339-210ENST00000635675 PQBP1O60828 265 aaKnown RBP11.05□□□□□ -0.64
LINC00339-210ENST00000635675 F2P00734 622 aa11.05□□□□□ -0.64
LINC00339-210ENST00000635675 ZNF286BP0CG31 522 aa11.05□□□□□ -0.64
LINC00339-210ENST00000635675 SETQ01105 290 aaPredicted RBP11.05□□□□□ -0.64
LINC00339-210ENST00000635675 FAAP100Q0VG06 881 aa11.05□□□□□ -0.64
LINC00339-210ENST00000635675 SAFBQ15424 915 aaKnown RBP eCLIP11.05□□□□□ -0.64
LINC00339-210ENST00000635675 NBPF20Q3BBV1 942 aa11.05□□□□□ -0.64
LINC00339-210ENST00000635675 PPP4R3AQ6IN85 833 aa11.05□□□□□ -0.64
LINC00339-210ENST00000635675 NEK8Q86SG6 692 aa11.05□□□□□ -0.64
LINC00339-210ENST00000635675 FAM126BQ8IXS8 530 aa11.05□□□□□ -0.64
LINC00339-210ENST00000635675 SEPT1Q8WYJ6 367 aa11.05□□□□□ -0.64
LINC00339-210ENST00000635675 SDF4Q9BRK5 362 aa11.05□□□□□ -0.64
LINC00339-210ENST00000635675 ZNF577Q9BSK1 485 aa11.05□□□□□ -0.64
LINC00339-210ENST00000635675 JPH1Q9HDC5 661 aaPredicted RBP11.05□□□□□ -0.64
LINC00339-210ENST00000635675 TBC1D22BQ9NU19 505 aa11.05□□□□□ -0.64
LINC00339-210ENST00000635675 SLC9A2Q9UBY0 812 aa11.05□□□□□ -0.64
LINC00339-210ENST00000635675 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.05□□□□□ -0.64
LINC00339-210ENST00000635675 MROH7Q68CQ1 1323 aa11.05□□□□□ -0.64
LINC00339-210ENST00000635675 DCDC2CA8MYV0 355 aa11.04□□□□□ -0.64
LINC00339-210ENST00000635675 MSH4O15457 936 aa11.04□□□□□ -0.64
LINC00339-210ENST00000635675 TDP2O95551 362 aa11.04□□□□□ -0.64
LINC00339-210ENST00000635675 CCNE2O96020 404 aa11.04□□□□□ -0.64
LINC00339-210ENST00000635675 CD4P01730 458 aa11.04□□□□□ -0.64
LINC00339-210ENST00000635675 LGALS2P05162 132 aa11.04□□□□□ -0.64
LINC00339-210ENST00000635675 GJB2P29033 226 aa11.04□□□□□ -0.64
LINC00339-210ENST00000635675 PSEN2P49810 448 aa11.04□□□□□ -0.64
LINC00339-210ENST00000635675 SP4Q02446 784 aa11.04□□□□□ -0.64
LINC00339-210ENST00000635675 LETM2Q2VYF4 491 aa11.04□□□□□ -0.64
LINC00339-210ENST00000635675 NFRKBQ6P4R8 1299 aa11.04□□□□□ -0.64
LINC00339-210ENST00000635675 SLC5A5Q92911 643 aa11.04□□□□□ -0.64
LINC00339-210ENST00000635675 UIMC1Q96RL1 719 aa11.04□□□□□ -0.64
LINC00339-210ENST00000635675 FOXP1Q9H334 677 aaPredicted RBP11.04□□□□□ -0.64
LINC00339-210ENST00000635675 SMC3Q9UQE7 1217 aa11.04□□□□□ -0.64
LINC00339-210ENST00000635675 KIF3AQ9Y496 699 aa11.04□□□□□ -0.64
LINC00339-210ENST00000635675 H3BRB1 525 aa11.03□□□□□ -0.64
LINC00339-210ENST00000635675 K7ELQ4 463 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-210ENST00000635675 KIAA0355O15063 1070 aa11.03□□□□□ -0.64
LINC00339-210ENST00000635675 ATG7O95352 703 aa11.03□□□□□ -0.64
LINC00339-210ENST00000635675 CLTBP09497 229 aa11.03□□□□□ -0.64
LINC00339-210ENST00000635675 GCFC2P16383 781 aaKnown RBP11.03□□□□□ -0.64
LINC00339-210ENST00000635675 TCF7P36402 384 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-210ENST00000635675 ANP32AP39687 249 aaKnown RBP11.03□□□□□ -0.64
LINC00339-210ENST00000635675 ACTR2P61160 394 aa11.03□□□□□ -0.64
LINC00339-210ENST00000635675 PTPN11Q06124 597 aaPredicted RBP11.03□□□□□ -0.64
LINC00339-210ENST00000635675 MFSD10Q14728 455 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms