RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 NRKQ7Z2Y5 1582 aa9.47□□□□□ -0.89
SMARCA2-239ENST00000635388 KCNQ2O43526 872 aa9.47□□□□□ -0.89
SMARCA2-239ENST00000635388 RFPL3O75679 317 aa9.47□□□□□ -0.89
SMARCA2-239ENST00000635388 EEF1DP3Q658K8 133 aa9.47□□□□□ -0.89
SMARCA2-239ENST00000635388 CCDC103Q8IW40 242 aa9.47□□□□□ -0.89
SMARCA2-239ENST00000635388 IPO9Q96P70 1041 aaKnown RBP9.47□□□□□ -0.89
SMARCA2-239ENST00000635388 G6PC3Q9BUM1 346 aa9.47□□□□□ -0.89
SMARCA2-239ENST00000635388 CARS2Q9HA77 564 aaKnown RBP9.47□□□□□ -0.89
SMARCA2-239ENST00000635388 CCDC39Q9UFE4 941 aa9.47□□□□□ -0.89
SMARCA2-239ENST00000635388 TMEFF2Q9UIK5 374 aaPredicted RBP9.47□□□□□ -0.89
SMARCA2-239ENST00000635388 TRPC5Q9UL62 973 aaPredicted RBP9.47□□□□□ -0.89
SMARCA2-239ENST00000635388 NPFFR2Q9Y5X5 522 aa9.47□□□□□ -0.89
SMARCA2-239ENST00000635388 ACEP12821 1306 aa9.47□□□□□ -0.89
SMARCA2-239ENST00000635388 EVC2Q86UK5 1308 aa9.47□□□□□ -0.89
SMARCA2-239ENST00000635388 PIK3C2AO00443 1686 aa9.46□□□□□ -0.89
SMARCA2-239ENST00000635388 PLS3P13797 630 aa9.46□□□□□ -0.9
SMARCA2-239ENST00000635388 SEPHS1P49903 392 aa9.46□□□□□ -0.9
SMARCA2-239ENST00000635388 GYS2P54840 703 aa9.46□□□□□ -0.9
SMARCA2-239ENST00000635388 PABPC4Q13310 644 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMARCA2-239ENST00000635388 IKZF1Q13422 519 aa9.46□□□□□ -0.9
SMARCA2-239ENST00000635388 FNDC3BQ53EP0 1204 aaKnown RBP9.46□□□□□ -0.9
SMARCA2-239ENST00000635388 TMEM52Q8NDY8 209 aa9.46□□□□□ -0.9
SMARCA2-239ENST00000635388 GSTCDQ8NEC7 633 aa9.46□□□□□ -0.9
SMARCA2-239ENST00000635388 CARD11Q9BXL7 1154 aa9.46□□□□□ -0.9
SMARCA2-239ENST00000635388 SLC52A2Q9HAB3 445 aa9.46□□□□□ -0.9
SMARCA2-239ENST00000635388 LMCD1Q9NZU5 365 aa9.46□□□□□ -0.9
SMARCA2-239ENST00000635388 CLEC1BQ9P126 229 aa9.46□□□□□ -0.9
SMARCA2-239ENST00000635388 PLAAQ9Y263 795 aa9.46□□□□□ -0.9
SMARCA2-239ENST00000635388 SSU72P8A0A1W2PR75 194 aa9.45□□□□□ -0.9
SMARCA2-239ENST00000635388 ENDOUP21128 410 aaKnown RBP9.45□□□□□ -0.9
SMARCA2-239ENST00000635388 VSIG10LQ86VR7 867 aa9.45□□□□□ -0.9
SMARCA2-239ENST00000635388 PPIL6Q8IXY8 311 aa9.45□□□□□ -0.9
SMARCA2-239ENST00000635388 SLC7A14Q8TBB6 771 aa9.45□□□□□ -0.9
SMARCA2-239ENST00000635388 NINJ1Q92982 152 aa9.45□□□□□ -0.9
SMARCA2-239ENST00000635388 FCRL2Q96LA5 508 aaPredicted RBP9.45□□□□□ -0.9
SMARCA2-239ENST00000635388 PTCHD1Q96NR3 888 aa9.45□□□□□ -0.9
SMARCA2-239ENST00000635388 CDADC1Q9BWV3 514 aa9.45□□□□□ -0.9
SMARCA2-239ENST00000635388 TRIM39Q9HCM9 518 aa9.45□□□□□ -0.9
SMARCA2-239ENST00000635388 EBF1Q9UH73 591 aa9.45□□□□□ -0.9
SMARCA2-239ENST00000635388 SLC5A6Q9Y289 635 aa9.45□□□□□ -0.9
SMARCA2-239ENST00000635388 USP6P35125 1406 aa9.45□□□□□ -0.9
SMARCA2-239ENST00000635388 CLSTN1O94985 981 aa9.44□□□□□ -0.9
SMARCA2-239ENST00000635388 SSTR4P31391 388 aa9.44□□□□□ -0.9
SMARCA2-239ENST00000635388 GABREP78334 506 aa9.44□□□□□ -0.9
SMARCA2-239ENST00000635388 C21orf62-AS1Q17RA5 79 aa9.44□□□□□ -0.9
SMARCA2-239ENST00000635388 ANGEL2Q5VTE6 544 aaKnown RBP9.44□□□□□ -0.9
SMARCA2-239ENST00000635388 E4F1Q66K89 784 aaPredicted RBP9.44□□□□□ -0.9
SMARCA2-239ENST00000635388 MBLAC2Q68D91 279 aa9.44□□□□□ -0.9
SMARCA2-239ENST00000635388 STYK1Q6J9G0 422 aa9.44□□□□□ -0.9
SMARCA2-239ENST00000635388 USP53Q70EK8 1073 aa9.44□□□□□ -0.9
SMARCA2-239ENST00000635388 UNC5CLQ8IV45 518 aa9.44□□□□□ -0.9
SMARCA2-239ENST00000635388 KSR1Q8IVT5 923 aa9.44□□□□□ -0.9
SMARCA2-239ENST00000635388 SFMBT1Q9UHJ3 866 aa9.44□□□□□ -0.9
SMARCA2-239ENST00000635388 BRD4O60885 1362 aaPredicted RBP9.43□□□□□ -0.9
SMARCA2-239ENST00000635388 ANKRD62A6NC57 917 aa9.43□□□□□ -0.9
SMARCA2-239ENST00000635388 ADAM23O75077 832 aa9.43□□□□□ -0.9
SMARCA2-239ENST00000635388 RPL10P27635 214 aaKnown RBP9.43□□□□□ -0.9
SMARCA2-239ENST00000635388 DCAF4Q8WV16 495 aa9.43□□□□□ -0.9
SMARCA2-239ENST00000635388 LINC01599Q8WXQ3 324 aa9.43□□□□□ -0.9
SMARCA2-239ENST00000635388 PTPRN2Q92932 1015 aa9.43□□□□□ -0.9
SMARCA2-239ENST00000635388 MMP19Q99542 508 aa9.43□□□□□ -0.9
SMARCA2-239ENST00000635388 PCGF6Q9BYE7 350 aa9.43□□□□□ -0.9
SMARCA2-239ENST00000635388 PAK6Q9NQU5 681 aaPredicted RBP9.43□□□□□ -0.9
SMARCA2-239ENST00000635388 LMO7Q8WWI1 1683 aa9.42□□□□□ -0.9
SMARCA2-239ENST00000635388 MEFVO15553 781 aaPredicted RBP9.42□□□□□ -0.9
SMARCA2-239ENST00000635388 ADAMTS4O75173 837 aa9.42□□□□□ -0.9
SMARCA2-239ENST00000635388 ZP2Q05996 745 aa9.42□□□□□ -0.9
SMARCA2-239ENST00000635388 TM4SF20Q53R12 229 aa9.42□□□□□ -0.9
SMARCA2-239ENST00000635388 KCNT2Q6UVM3 1135 aa9.42□□□□□ -0.9
SMARCA2-239ENST00000635388 CYP2R1Q6VVX0 501 aa9.42□□□□□ -0.9
SMARCA2-239ENST00000635388 MAMDC2Q7Z304 686 aaPredicted RBP9.42□□□□□ -0.9
SMARCA2-239ENST00000635388 BRAPQ7Z569 592 aa9.42□□□□□ -0.9
SMARCA2-239ENST00000635388 SCLYQ96I15 445 aa9.42□□□□□ -0.9
SMARCA2-239ENST00000635388 PRDM11Q9NQV5 511 aa9.42□□□□□ -0.9
SMARCA2-239ENST00000635388 PRKAB1Q9Y478 270 aa9.42□□□□□ -0.9
SMARCA2-239ENST00000635388 TRAF6Q9Y4K3 522 aa9.42□□□□□ -0.9
SMARCA2-239ENST00000635388 RGPD5Q99666 1765 aa9.42□□□□□ -0.9
SMARCA2-239ENST00000635388 USP54Q70EL1 1684 aa9.42□□□□□ -0.9
SMARCA2-239ENST00000635388 KIAA0232Q92628 1395 aa9.41□□□□□ -0.9
SMARCA2-239ENST00000635388 USP19O94966 1318 aa9.41□□□□□ -0.9
SMARCA2-239ENST00000635388 CLSPNQ9HAW4 1339 aa9.41□□□□□ -0.9
SMARCA2-239ENST00000635388 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.41□□□□□ -0.9
SMARCA2-239ENST00000635388 ZGLP1P0C6A0 271 aa9.41□□□□□ -0.9
SMARCA2-239ENST00000635388 LCP1P13796 627 aa9.41□□□□□ -0.9
SMARCA2-239ENST00000635388 PAMP19021 973 aa9.41□□□□□ -0.9
SMARCA2-239ENST00000635388 SDSP20132 328 aa9.41□□□□□ -0.9
SMARCA2-239ENST00000635388 INF2Q27J81 1249 aa9.41□□□□□ -0.9
SMARCA2-239ENST00000635388 RALGPS1Q5JS13 557 aa9.41□□□□□ -0.9
SMARCA2-239ENST00000635388 RSPO2Q6UXX9 243 aaPredicted RBP9.41□□□□□ -0.9
SMARCA2-239ENST00000635388 NIM1KQ8IY84 436 aa9.41□□□□□ -0.9
SMARCA2-239ENST00000635388 MAP6Q96JE9 813 aa9.41□□□□□ -0.9
SMARCA2-239ENST00000635388 PHF20Q9BVI0 1012 aa9.41□□□□□ -0.9
SMARCA2-239ENST00000635388 SLKQ9H2G2 1235 aaPredicted RBP9.41□□□□□ -0.9
SMARCA2-239ENST00000635388 NDOR1Q9UHB4 597 aa9.41□□□□□ -0.9
SMARCA2-239ENST00000635388 SLIT3O75094 1523 aa9.41□□□□□ -0.9
SMARCA2-239ENST00000635388 LTN1O94822 1766 aa9.4□□□□□ -0.9
SMARCA2-239ENST00000635388 THSD7AQ9UPZ6 1657 aa9.4□□□□□ -0.9
SMARCA2-239ENST00000635388 FAM83GA6ND36 823 aa9.4□□□□□ -0.9
SMARCA2-239ENST00000635388 DNAJC8O75937 253 aaPredicted RBP9.4□□□□□ -0.9
SMARCA2-239ENST00000635388 FUT4P22083 530 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms