RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 ARVCFO00192 962 aa16.77■□□□□ 0.28
CDC42BPB-209ENST00000634889 ATP9AO75110 1047 aa16.77■□□□□ 0.28
CDC42BPB-209ENST00000634889 ITGA7Q13683 1181 aa16.77■□□□□ 0.28
CDC42BPB-209ENST00000634889 TRIM60Q495X7 471 aa16.77■□□□□ 0.28
CDC42BPB-209ENST00000634889 PLA2G4DQ86XP0 818 aa16.77■□□□□ 0.28
CDC42BPB-209ENST00000634889 C7orf61Q8IZ16 206 aa16.77■□□□□ 0.28
CDC42BPB-209ENST00000634889 SLC43A3Q8NBI5 491 aa16.77■□□□□ 0.28
CDC42BPB-209ENST00000634889 OXER1Q8TDS5 423 aa16.77■□□□□ 0.28
CDC42BPB-209ENST00000634889 TNFRSF25Q93038 417 aa16.77■□□□□ 0.28
CDC42BPB-209ENST00000634889 TOX2Q96NM4 488 aa16.77■□□□□ 0.28
CDC42BPB-209ENST00000634889 AGO4Q9HCK5 861 aaKnown RBP16.77■□□□□ 0.28
CDC42BPB-209ENST00000634889 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.77■□□□□ 0.28
CDC42BPB-209ENST00000634889 F2P00734 622 aa16.76■□□□□ 0.27
CDC42BPB-209ENST00000634889 ARP10275 920 aa16.76■□□□□ 0.27
CDC42BPB-209ENST00000634889 CDK7P50613 346 aa16.76■□□□□ 0.27
CDC42BPB-209ENST00000634889 SAFBQ15424 915 aaKnown RBP eCLIP16.76■□□□□ 0.27
CDC42BPB-209ENST00000634889 PRR16Q569H4 304 aa16.76■□□□□ 0.27
CDC42BPB-209ENST00000634889 DIS3L2Q8IYB7 885 aaKnown RBP16.76■□□□□ 0.27
CDC42BPB-209ENST00000634889 FBXO18Q8NFZ0 1043 aa16.76■□□□□ 0.27
CDC42BPB-209ENST00000634889 GPR20Q99678 358 aa16.76■□□□□ 0.27
CDC42BPB-209ENST00000634889 NAP1L4Q99733 375 aaKnown RBP16.76■□□□□ 0.27
CDC42BPB-209ENST00000634889 SDF4Q9BRK5 362 aa16.76■□□□□ 0.27
CDC42BPB-209ENST00000634889 KATNAL1Q9BW62 490 aa16.76■□□□□ 0.27
CDC42BPB-209ENST00000634889 BCAS3Q9H6U6 928 aa16.76■□□□□ 0.27
CDC42BPB-209ENST00000634889 JPH1Q9HDC5 661 aaPredicted RBP16.76■□□□□ 0.27
CDC42BPB-209ENST00000634889 ATP11BQ9Y2G3 1177 aa16.76■□□□□ 0.27
CDC42BPB-209ENST00000634889 CYP3A7-CYP3A51PA0A087WV96 503 aa16.75■□□□□ 0.27
CDC42BPB-209ENST00000634889 EDIL3O43854 480 aa16.75■□□□□ 0.27
CDC42BPB-209ENST00000634889 SORBS3O60504 671 aa16.75■□□□□ 0.27
CDC42BPB-209ENST00000634889 GCFC2P16383 781 aaKnown RBP16.75■□□□□ 0.27
CDC42BPB-209ENST00000634889 CYP3A7P24462 503 aa16.75■□□□□ 0.27
CDC42BPB-209ENST00000634889 NR5A1Q13285 461 aa16.75■□□□□ 0.27
CDC42BPB-209ENST00000634889 CUL4AQ13619 759 aa16.75■□□□□ 0.27
CDC42BPB-209ENST00000634889 INF2Q27J81 1249 aa16.75■□□□□ 0.27
CDC42BPB-209ENST00000634889 NFRKBQ6P4R8 1299 aa16.75■□□□□ 0.27
CDC42BPB-209ENST00000634889 PIK3AP1Q6ZUJ8 805 aa16.75■□□□□ 0.27
CDC42BPB-209ENST00000634889 NEK8Q86SG6 692 aa16.75■□□□□ 0.27
CDC42BPB-209ENST00000634889 LENG9Q96B70 501 aa16.75■□□□□ 0.27
CDC42BPB-209ENST00000634889 GRIN2DO15399 1336 aa16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 DCDC2CA8MYV0 355 aa16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 BTBD18B2RXH4 712 aa16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 K7ELQ4 463 aaPredicted RBP16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 IPO5O00410 1097 aaKnown RBP16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 FOSBP53539 338 aa16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 PSMC6P62333 389 aa16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 TLE2Q04725 743 aa16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 PTPN11Q06124 597 aaPredicted RBP16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 ITGB3BPQ13352 177 aaPredicted RBP16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 Q4G0T1 1027 aa16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 KAT2BQ92831 832 aa16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 SNX21Q969T3 373 aa16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 MBOAT7Q96N66 472 aa16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 ZNF577Q9BSK1 485 aa16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 FOXP1Q9H334 677 aaPredicted RBP16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 TBC1D22BQ9NU19 505 aa16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 PKD2L1Q9P0L9 805 aa16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 SLC9A2Q9UBY0 812 aa16.74■□□□□ 0.27
CDC42BPB-209ENST00000634889 TLR3O15455 904 aaKnown RBP16.73■□□□□ 0.27
CDC42BPB-209ENST00000634889 PQBP1O60828 265 aaKnown RBP16.73■□□□□ 0.27
CDC42BPB-209ENST00000634889 LGALS2P05162 132 aa16.73■□□□□ 0.27
CDC42BPB-209ENST00000634889 CLTBP09497 229 aa16.73■□□□□ 0.27
CDC42BPB-209ENST00000634889 ZNF286BP0CG31 522 aa16.73■□□□□ 0.27
CDC42BPB-209ENST00000634889 GJB2P29033 226 aa16.73■□□□□ 0.27
CDC42BPB-209ENST00000634889 PRPF38BQ5VTL8 546 aaKnown RBP16.73■□□□□ 0.27
CDC42BPB-209ENST00000634889 PPP4R3AQ6IN85 833 aa16.73■□□□□ 0.27
CDC42BPB-209ENST00000634889 SESTD1Q86VW0 696 aa16.73■□□□□ 0.27
CDC42BPB-209ENST00000634889 FAM126BQ8IXS8 530 aa16.73■□□□□ 0.27
CDC42BPB-209ENST00000634889 SEPT1Q8WYJ6 367 aa16.73■□□□□ 0.27
CDC42BPB-209ENST00000634889 C16orf70Q9BSU1 422 aa16.73■□□□□ 0.27
CDC42BPB-209ENST00000634889 SMC3Q9UQE7 1217 aa16.73■□□□□ 0.27
CDC42BPB-209ENST00000634889 PDE4DIPQ5VU43 2346 aa16.73■□□□□ 0.27
CDC42BPB-209ENST00000634889 H0YGN5 161 aa16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 H3BRB1 525 aa16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 HAS3O00219 553 aa16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 TDP2O95551 362 aa16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 TCF7P36402 384 aaPredicted RBP16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 GUCY1B3Q02153 619 aa16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 SP4Q02446 784 aa16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 MFSD10Q14728 455 aa16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 LETM2Q2VYF4 491 aa16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 NBPF20Q3BBV1 942 aa16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 EARS2Q5JPH6 523 aaKnown RBP16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 RIT2Q99578 217 aa16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 TUT1Q9H6E5 874 aaKnown RBP16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 PDLIM7Q9NR12 457 aa16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 PRKAG2Q9UGJ0 569 aa16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 DDX25Q9UHL0 483 aaKnown RBP16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 TCEAL9Q9UHQ7 104 aa16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 ZNF215Q9UL58 517 aaPredicted RBP16.72■□□□□ 0.27
CDC42BPB-209ENST00000634889 EMSYQ7Z589 1322 aa16.71■□□□□ 0.27
CDC42BPB-209ENST00000634889 GSTTP1A0A1W2PQM5 241 aa16.71■□□□□ 0.27
CDC42BPB-209ENST00000634889 MSH4O15457 936 aa16.71■□□□□ 0.27
CDC42BPB-209ENST00000634889 DHX15O43143 795 aaKnown RBP16.71■□□□□ 0.27
CDC42BPB-209ENST00000634889 CD4P01730 458 aa16.71■□□□□ 0.27
CDC42BPB-209ENST00000634889 PSEN2P49810 448 aa16.71■□□□□ 0.27
CDC42BPB-209ENST00000634889 ACTR2P61160 394 aa16.71■□□□□ 0.27
CDC42BPB-209ENST00000634889 KRT76Q01546 638 aa16.71■□□□□ 0.27
CDC42BPB-209ENST00000634889 FAAP100Q0VG06 881 aa16.71■□□□□ 0.27
CDC42BPB-209ENST00000634889 KIAA0753Q2KHM9 967 aa16.71■□□□□ 0.27
CDC42BPB-209ENST00000634889 INTS4Q96HW7 963 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms