RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 LAMA2P24043 3122 aaKnown RBP21.23■□□□□ 0.99
PNKP-224ENST00000631020 VPS37CA5D8V6 355 aaPredicted RBP21.22■□□□□ 0.99
PNKP-224ENST00000631020 STX6O43752 255 aa21.22■□□□□ 0.99
PNKP-224ENST00000631020 TIMP1P01033 207 aa21.22■□□□□ 0.99
PNKP-224ENST00000631020 ARHGAP4P98171 946 aa21.22■□□□□ 0.99
PNKP-224ENST00000631020 TMEM63BQ5T3F8 832 aa21.22■□□□□ 0.99
PNKP-224ENST00000631020 PCNX4Q63HM2 1172 aa21.22■□□□□ 0.99
PNKP-224ENST00000631020 TBCKQ8TEA7 893 aa21.22■□□□□ 0.99
PNKP-224ENST00000631020 POLR3EQ9NVU0 708 aa21.22■□□□□ 0.99
PNKP-224ENST00000631020 CCDC194A0A1B0GVG4 234 aa21.21■□□□□ 0.99
PNKP-224ENST00000631020 CD4P01730 458 aa21.21■□□□□ 0.99
PNKP-224ENST00000631020 PKP1Q13835 747 aa21.21■□□□□ 0.99
PNKP-224ENST00000631020 TTLL4Q14679 1199 aa21.21■□□□□ 0.99
PNKP-224ENST00000631020 NONOQ15233 471 aaKnown RBP eCLIP21.21■□□□□ 0.99
PNKP-224ENST00000631020 STXBP2Q15833 593 aa21.21■□□□□ 0.99
PNKP-224ENST00000631020 INF2Q27J81 1249 aa21.21■□□□□ 0.99
PNKP-224ENST00000631020 BRDTQ58F21 947 aaPredicted RBP21.21■□□□□ 0.99
PNKP-224ENST00000631020 MCTP1Q6DN14 999 aa21.21■□□□□ 0.99
PNKP-224ENST00000631020 RGS20O76081 388 aa21.2■□□□□ 0.98
PNKP-224ENST00000631020 CCND2P30279 289 aa21.2■□□□□ 0.98
PNKP-224ENST00000631020 FPGSQ05932 587 aa21.2■□□□□ 0.98
PNKP-224ENST00000631020 ITGA7Q13683 1181 aa21.2■□□□□ 0.98
PNKP-224ENST00000631020 SHHQ15465 462 aa21.2■□□□□ 0.98
PNKP-224ENST00000631020 FAM109BQ6ICB4 259 aaPredicted RBP21.2■□□□□ 0.98
PNKP-224ENST00000631020 NOSTRINQ8IVI9 506 aa21.2■□□□□ 0.98
PNKP-224ENST00000631020 EHMT1Q9H9B1 1298 aa21.2■□□□□ 0.98
PNKP-224ENST00000631020 RTEL1Q9NZ71 1219 aa21.2■□□□□ 0.98
PNKP-224ENST00000631020 MYH7BA7E2Y1 1941 aa21.2■□□□□ 0.98
PNKP-224ENST00000631020 SCN10AQ9Y5Y9 1956 aa21.2■□□□□ 0.98
PNKP-224ENST00000631020 KPNA6O60684 536 aa21.19■□□□□ 0.98
PNKP-224ENST00000631020 EIF3JO75822 258 aaKnown RBP21.19■□□□□ 0.98
PNKP-224ENST00000631020 CYP3A4P08684 503 aa21.19■□□□□ 0.98
PNKP-224ENST00000631020 DDIT3P35638 169 aa21.19■□□□□ 0.98
PNKP-224ENST00000631020 MFSD5Q6N075 450 aa21.19■□□□□ 0.98
PNKP-224ENST00000631020 XRRA1Q6P2D8 792 aa21.19■□□□□ 0.98
PNKP-224ENST00000631020 OR6J1Q8NGC5 347 aa21.19■□□□□ 0.98
PNKP-224ENST00000631020 GRIN2DO15399 1336 aa21.19■□□□□ 0.98
PNKP-224ENST00000631020 A6NJR5 290 aa21.19■□□□□ 0.98
PNKP-224ENST00000631020 TXNP10599 105 aaKnown RBP21.19■□□□□ 0.98
PNKP-224ENST00000631020 ITGB5P18084 799 aa21.19■□□□□ 0.98
PNKP-224ENST00000631020 PTGS1P23219 599 aa21.19■□□□□ 0.98
PNKP-224ENST00000631020 PURAQ00577 322 aaKnown RBP21.19■□□□□ 0.98
PNKP-224ENST00000631020 GNL2Q13823 731 aaKnown RBP21.19■□□□□ 0.98
PNKP-224ENST00000631020 C9orf50Q5SZB4 431 aa21.19■□□□□ 0.98
PNKP-224ENST00000631020 CCDC62Q6P9F0 684 aa21.19■□□□□ 0.98
PNKP-224ENST00000631020 FERMT3Q86UX7 667 aa21.19■□□□□ 0.98
PNKP-224ENST00000631020 CYP2W1Q8TAV3 490 aa21.19■□□□□ 0.98
PNKP-224ENST00000631020 WNT7AO00755 349 aa21.18■□□□□ 0.98
PNKP-224ENST00000631020 USP11P51784 963 aa21.18■□□□□ 0.98
PNKP-224ENST00000631020 DAXXQ9UER7 740 aaPredicted RBP21.18■□□□□ 0.98
PNKP-224ENST00000631020 UBIAD1Q9Y5Z9 338 aa21.18■□□□□ 0.98
PNKP-224ENST00000631020 FAM86B1E9PN63 330 aa21.17■□□□□ 0.98
PNKP-224ENST00000631020 FAM86B2P0C5J1 330 aa21.17■□□□□ 0.98
PNKP-224ENST00000631020 CIITAP33076 1130 aa21.17■□□□□ 0.98
PNKP-224ENST00000631020 NEK8Q86SG6 692 aa21.17■□□□□ 0.98
PNKP-224ENST00000631020 DEFB123Q8N688 67 aa21.17■□□□□ 0.98
PNKP-224ENST00000631020 INPP4AQ96PE3 977 aaPredicted RBP21.17■□□□□ 0.98
PNKP-224ENST00000631020 MTG1Q9BT17 334 aaPredicted RBP21.17■□□□□ 0.98
PNKP-224ENST00000631020 ZDHHC9Q9Y397 364 aa21.17■□□□□ 0.98
PNKP-224ENST00000631020 TOB1P50616 345 aaPredicted RBP21.16■□□□□ 0.98
PNKP-224ENST00000631020 RESTQ13127 1097 aa21.16■□□□□ 0.98
PNKP-224ENST00000631020 PPIGQ13427 754 aaKnown RBP eCLIP21.16■□□□□ 0.985e-7■■■■□ 22.6
PNKP-224ENST00000631020 SEPT14Q6ZU15 432 aa21.16■□□□□ 0.98
PNKP-224ENST00000631020 TMEM199Q8N511 208 aa21.16■□□□□ 0.98
PNKP-224ENST00000631020 IPO9Q96P70 1041 aaKnown RBP21.16■□□□□ 0.98
PNKP-224ENST00000631020 MXRA8Q9BRK3 442 aa21.16■□□□□ 0.98
PNKP-224ENST00000631020 IGLV3-22A0A075B6J6 115 aa21.15■□□□□ 0.98
PNKP-224ENST00000631020 MEIS1O00470 390 aa21.15■□□□□ 0.98
PNKP-224ENST00000631020 STAM2O75886 525 aa21.15■□□□□ 0.98
PNKP-224ENST00000631020 ARIH2O95376 493 aa21.15■□□□□ 0.98
PNKP-224ENST00000631020 TDP2O95551 362 aa21.15■□□□□ 0.98
PNKP-224ENST00000631020 EPHB4P54760 987 aa21.15■□□□□ 0.98
PNKP-224ENST00000631020 SMAD3P84022 425 aaKnown RBP21.15■□□□□ 0.98
PNKP-224ENST00000631020 SEMA3FQ13275 785 aa21.15■□□□□ 0.98
PNKP-224ENST00000631020 LETM2Q2VYF4 491 aa21.15■□□□□ 0.98
PNKP-224ENST00000631020 CEP55Q53EZ4 464 aa21.15■□□□□ 0.98
PNKP-224ENST00000631020 FOXD4L5Q5VV16 416 aaPredicted RBP21.15■□□□□ 0.98
PNKP-224ENST00000631020 FOXD4L4Q8WXT5 416 aaPredicted RBP21.15■□□□□ 0.98
PNKP-224ENST00000631020 JADE2Q9NQC1 790 aa21.15■□□□□ 0.98
PNKP-224ENST00000631020 CYP3A7-CYP3A51PA0A087WV96 503 aa21.14■□□□□ 0.98
PNKP-224ENST00000631020 GH1P01241 217 aa21.14■□□□□ 0.98
PNKP-224ENST00000631020 ZSCAN22P10073 491 aaPredicted RBP21.14■□□□□ 0.98
PNKP-224ENST00000631020 PDIA4P13667 645 aaKnown RBP21.14■□□□□ 0.98
PNKP-224ENST00000631020 CYP3A7P24462 503 aa21.14■□□□□ 0.98
PNKP-224ENST00000631020 ZNF76P36508 570 aa21.14■□□□□ 0.98
PNKP-224ENST00000631020 EMID1Q96A84 441 aaPredicted RBP21.14■□□□□ 0.98
PNKP-224ENST00000631020 LENG9Q96B70 501 aa21.14■□□□□ 0.98
PNKP-224ENST00000631020 MTMR10Q9NXD2 777 aa21.14■□□□□ 0.98
PNKP-224ENST00000631020 SPATA31C2B4DYI2 1134 aa21.14■□□□□ 0.97
PNKP-224ENST00000631020 MYL3P08590 195 aa21.14■□□□□ 0.97
PNKP-224ENST00000631020 SUPT20HL2P0C7V6 817 aa21.14■□□□□ 0.97
PNKP-224ENST00000631020 ATP2B1P20020 1258 aa21.14■□□□□ 0.97
PNKP-224ENST00000631020 PSMC6P62333 389 aa21.14■□□□□ 0.97
PNKP-224ENST00000631020 FAM173BQ6P4H8 233 aa21.14■□□□□ 0.97
PNKP-224ENST00000631020 NFRKBQ6P4R8 1299 aa21.14■□□□□ 0.97
PNKP-224ENST00000631020 KCNV1Q6PIU1 500 aa21.14■□□□□ 0.97
PNKP-224ENST00000631020 COPS5Q92905 334 aa21.14■□□□□ 0.97
PNKP-224ENST00000631020 RNPC3Q96LT9 517 aaKnown RBP21.14■□□□□ 0.97
PNKP-224ENST00000631020 MBOAT7Q96N66 472 aa21.14■□□□□ 0.97
PNKP-224ENST00000631020 HIPK3Q9H422 1215 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms