RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 HSCBQ8IWL3 235 aa9.15□□□□□ -0.94
CHD2-213ENST00000628118 DHX37Q8IY37 1157 aaKnown RBP9.15□□□□□ -0.94
CHD2-213ENST00000628118 FBXO18Q8NFZ0 1043 aa9.15□□□□□ -0.94
CHD2-213ENST00000628118 PPTC7Q8NI37 304 aa9.15□□□□□ -0.94
CHD2-213ENST00000628118 PAWRQ96IZ0 340 aaKnown RBP9.15□□□□□ -0.94
CHD2-213ENST00000628118 GLT1D1Q96MS3 346 aa9.15□□□□□ -0.94
CHD2-213ENST00000628118 TMEM260Q9NX78 707 aa9.15□□□□□ -0.94
CHD2-213ENST00000628118 SMC3Q9UQE7 1217 aa9.15□□□□□ -0.94
CHD2-213ENST00000628118 MYH7BA7E2Y1 1941 aa9.15□□□□□ -0.95
CHD2-213ENST00000628118 CYP3A7-CYP3A51PA0A087WV96 503 aa9.14□□□□□ -0.95
CHD2-213ENST00000628118 PPFIA4O75335 1185 aa9.14□□□□□ -0.95
CHD2-213ENST00000628118 ARIH2O95376 493 aa9.14□□□□□ -0.95
CHD2-213ENST00000628118 HOXD8P13378 290 aaPredicted RBP9.14□□□□□ -0.95
CHD2-213ENST00000628118 ITGB5P18084 799 aa9.14□□□□□ -0.95
CHD2-213ENST00000628118 PDCP20941 246 aa9.14□□□□□ -0.95
CHD2-213ENST00000628118 UBA1P22314 1058 aaKnown RBP9.14□□□□□ -0.95
CHD2-213ENST00000628118 CYP3A7P24462 503 aa9.14□□□□□ -0.95
CHD2-213ENST00000628118 ARHGAP1Q07960 439 aa9.14□□□□□ -0.95
CHD2-213ENST00000628118 KCNA10Q16322 511 aa9.14□□□□□ -0.95
CHD2-213ENST00000628118 LY6KQ17RY6 165 aa9.14□□□□□ -0.95
CHD2-213ENST00000628118 GJC2Q5T442 439 aaPredicted RBP9.14□□□□□ -0.95
CHD2-213ENST00000628118 MYSM1Q5VVJ2 828 aa9.14□□□□□ -0.95
CHD2-213ENST00000628118 NEK8Q86SG6 692 aa9.14□□□□□ -0.95
CHD2-213ENST00000628118 TBCKQ8TEA7 893 aa9.14□□□□□ -0.95
CHD2-213ENST00000628118 SDF4Q9BRK5 362 aa9.14□□□□□ -0.95
CHD2-213ENST00000628118 KATNAL1Q9BW62 490 aa9.14□□□□□ -0.95
CHD2-213ENST00000628118 FOXP1Q9H334 677 aaPredicted RBP9.14□□□□□ -0.95
CHD2-213ENST00000628118 MLXIPQ9HAP2 919 aa9.14□□□□□ -0.95
CHD2-213ENST00000628118 RTEL1Q9NZ71 1219 aa9.14□□□□□ -0.95
CHD2-213ENST00000628118 KCNJ14Q9UNX9 436 aa9.14□□□□□ -0.95
CHD2-213ENST00000628118 COLQQ9Y215 455 aaPredicted RBP9.14□□□□□ -0.95
CHD2-213ENST00000628118 DDX49Q9Y6V7 483 aaKnown RBP9.14□□□□□ -0.95
CHD2-213ENST00000628118 MROH7Q68CQ1 1323 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 CTAGE5O15320 804 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 GGPS1O95749 300 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 ASGR1P07306 291 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 MMP3P08254 477 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 KCNA2P16389 499 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 GJB2P29033 226 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 ACLYP53396 1101 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 MLLT1Q03111 559 aaPredicted RBP9.13□□□□□ -0.95
CHD2-213ENST00000628118 SEMA3FQ13275 785 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 ORC2Q13416 577 aaPredicted RBP9.13□□□□□ -0.95
CHD2-213ENST00000628118 SNX17Q15036 470 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 DGKDQ16760 1214 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 Q4G0T1 1027 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 PPP4R3AQ6IN85 833 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 PLA2G4DQ86XP0 818 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 DIS3L2Q8IYB7 885 aaKnown RBP9.13□□□□□ -0.95
CHD2-213ENST00000628118 RASGRP4Q8TDF6 673 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 TNFRSF25Q93038 417 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 LENG1Q96BZ8 264 aaPredicted RBP9.13□□□□□ -0.95
CHD2-213ENST00000628118 PGBD1Q96JS3 809 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 SPATA33Q96N06 139 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 MBOAT7Q96N66 472 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 MTG1Q9BT17 334 aaPredicted RBP9.13□□□□□ -0.95
CHD2-213ENST00000628118 SENP6Q9GZR1 1112 aaPredicted RBP9.13□□□□□ -0.95
CHD2-213ENST00000628118 OCEL1Q9H607 264 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 STARD7Q9NQZ5 370 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 KCNH7Q9NS40 1196 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 TBC1D22BQ9NU19 505 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 TCEAL9Q9UHQ7 104 aa9.13□□□□□ -0.95
CHD2-213ENST00000628118 IGLV3-22A0A075B6J6 115 aa9.12□□□□□ -0.95
CHD2-213ENST00000628118 A0A0U1RQG5 324 aaPredicted RBP9.12□□□□□ -0.95
CHD2-213ENST00000628118 A0A1W2PQ45 241 aaPredicted RBP9.12□□□□□ -0.95
CHD2-213ENST00000628118 A0A1W2PQY0 241 aa9.12□□□□□ -0.95
CHD2-213ENST00000628118 MYADML2A6NDP7 307 aa9.12□□□□□ -0.95
CHD2-213ENST00000628118 FAM86B1E9PN63 330 aa9.12□□□□□ -0.95
CHD2-213ENST00000628118 H3BQV1 296 aa9.12□□□□□ -0.95
CHD2-213ENST00000628118 NOP56O00567 594 aaKnown RBP9.12□□□□□ -0.95
CHD2-213ENST00000628118 TBX3O15119 743 aa9.12□□□□□ -0.95
CHD2-213ENST00000628118 FAM86B2P0C5J1 330 aa9.12□□□□□ -0.95
CHD2-213ENST00000628118 TRAPPC10P48553 1259 aa9.12□□□□□ -0.95
CHD2-213ENST00000628118 PURAQ00577 322 aaKnown RBP9.12□□□□□ -0.95
CHD2-213ENST00000628118 PTPN11Q06124 597 aaPredicted RBP9.12□□□□□ -0.95
CHD2-213ENST00000628118 SLC39A5Q6ZMH5 540 aa9.12□□□□□ -0.95
CHD2-213ENST00000628118 PIK3AP1Q6ZUJ8 805 aa9.12□□□□□ -0.95
CHD2-213ENST00000628118 DIS3LQ8TF46 1054 aaKnown RBP9.12□□□□□ -0.95
CHD2-213ENST00000628118 AFG1LQ8WV93 481 aa9.12□□□□□ -0.95
CHD2-213ENST00000628118 SEPT1Q8WYJ6 367 aa9.12□□□□□ -0.95
CHD2-213ENST00000628118 COPS5Q92905 334 aa9.12□□□□□ -0.95
CHD2-213ENST00000628118 TNPO1Q92973 898 aaKnown RBP9.12□□□□□ -0.95
CHD2-213ENST00000628118 TOX2Q96NM4 488 aa9.12□□□□□ -0.95
CHD2-213ENST00000628118 RIT2Q99578 217 aa9.12□□□□□ -0.95
CHD2-213ENST00000628118 AGO4Q9HCK5 861 aaKnown RBP9.12□□□□□ -0.95
CHD2-213ENST00000628118 JPH1Q9HDC5 661 aaPredicted RBP9.12□□□□□ -0.95
CHD2-213ENST00000628118 BRCA2P51587 3418 aa9.12□□□□□ -0.95
CHD2-213ENST00000628118 SCN10AQ9Y5Y9 1956 aa9.12□□□□□ -0.95
CHD2-213ENST00000628118 BTBD18B2RXH4 712 aa9.11□□□□□ -0.95
CHD2-213ENST00000628118 ARVCFO00192 962 aa9.11□□□□□ -0.95
CHD2-213ENST00000628118 IPO5O00410 1097 aaKnown RBP9.11□□□□□ -0.95
CHD2-213ENST00000628118 MYL3P08590 195 aa9.11□□□□□ -0.95
CHD2-213ENST00000628118 U2AF2P26368 475 aaKnown RBP eCLIP9.11□□□□□ -0.956e-7■■■■□ 20.3
CHD2-213ENST00000628118 BEX3Q00994 111 aa9.11□□□□□ -0.95
CHD2-213ENST00000628118 KRT76Q01546 638 aa9.11□□□□□ -0.95
CHD2-213ENST00000628118 SP2Q02086 613 aa9.11□□□□□ -0.95
CHD2-213ENST00000628118 GNL2Q13823 731 aaKnown RBP9.11□□□□□ -0.95
CHD2-213ENST00000628118 INF2Q27J81 1249 aa9.11□□□□□ -0.95
CHD2-213ENST00000628118 LETM2Q2VYF4 491 aa9.11□□□□□ -0.95
CHD2-213ENST00000628118 PRR16Q569H4 304 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms