RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 MCM6Q14566 821 aa7.96□□□□□ -1.14
CTNNA1-244ENST00000627109 CALCRLQ16602 461 aa7.96□□□□□ -1.14
CTNNA1-244ENST00000627109 VWA3BQ502W6 1294 aa7.96□□□□□ -1.14
CTNNA1-244ENST00000627109 SAMD7Q7Z3H4 446 aa7.96□□□□□ -1.14
CTNNA1-244ENST00000627109 TRIM47Q96LD4 638 aa7.96□□□□□ -1.14
CTNNA1-244ENST00000627109 RHOXF2Q9BQY4 288 aa7.96□□□□□ -1.14
CTNNA1-244ENST00000627109 GLT8D2Q9H1C3 349 aa7.96□□□□□ -1.14
CTNNA1-244ENST00000627109 TMEM260Q9NX78 707 aa7.96□□□□□ -1.14
CTNNA1-244ENST00000627109 PPME1Q9Y570 386 aa7.96□□□□□ -1.14
CTNNA1-244ENST00000627109 CLRN2A0PK11 232 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 RCCD1A6NED2 376 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 AARSP49588 968 aaKnown RBP eCLIP7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 FOXD4Q12950 439 aaPredicted RBP7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 SKIDA1Q1XH10 827 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 LETM2Q2VYF4 491 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 APOBEC3HQ6NTF7 200 aaKnown RBP7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 TATDN1Q6P1N9 297 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 SV2BQ7L1I2 683 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 ADGRF4Q8IZF3 695 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 CALML4Q96GE6 196 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 NHEJ1Q9H9Q4 299 aaPredicted RBP7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 RRAGCQ9HB90 399 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 AGPAT5Q9NUQ2 364 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 HDAC9Q9UKV0 1011 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 TECP42680 631 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 GMPSP49915 693 aaPredicted RBP7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 VAV2P52735 878 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 SPIRE1Q08AE8 756 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 PICALMQ13492 652 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 ECM1Q16610 540 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 MAN2A1Q16706 1144 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 MCTP2Q6DN12 878 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 CAGE1Q8TC20 777 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 SLF1Q9BQI6 1058 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 IDI2Q9BXS1 227 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 TSGA10Q9BZW7 698 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 CPVLQ9H3G5 476 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 DNAJC18Q9H819 358 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 CNOT7Q9UIV1 285 aaKnown RBP7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 KCNG1Q9UIX4 513 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 GUCA1BQ9UMX6 200 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 ZBTB5O15062 677 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 SSBP05455 408 aaKnown RBP eCLIP7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 USP11P51784 963 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 USP14P54578 494 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 GRIPAP1Q4V328 841 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 KIAA1328Q86T90 577 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 ZDHHC15Q96MV8 337 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 UIMC1Q96RL1 719 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 PARP14Q460N5 1801 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 PITPNM2Q9BZ72 1349 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 KDM3AQ9Y4C1 1321 aa7.95□□□□□ -1.14
CTNNA1-244ENST00000627109 LOC285556D6RIA3 1793 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 SSU72P8A0A1W2PR75 194 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 TDP2O95551 362 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 CYLC1P35663 651 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 CACNB3P54284 484 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 TCP10Q12799 353 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 TTLL12Q14166 644 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 DLGAP5Q15398 846 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 TAF3Q5VWG9 929 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 HGSNATQ68CP4 663 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 KCNK18Q7Z418 384 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 DCAF4Q8WV16 495 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 CCDC17Q96LX7 622 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 CEP63Q96MT8 703 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 KCTD10Q9H3F6 313 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 NYAP2Q9P242 653 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 BIN2Q9UBW5 565 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 LRWD1Q9UFC0 647 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 SERPINB13Q9UIV8 391 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 TBX3O15119 743 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 TNFRSF8P28908 595 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 EPS15P42566 896 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 NAP1L1P55209 391 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 Q4G0T1 1027 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 MICALL2Q8IY33 904 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 GMCL1P1Q8NEA9 526 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 CDK5RAP3Q96JB5 506 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 NUDT12Q9BQG2 462 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 RAB34Q9BZG1 259 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 NDST4Q9H3R1 872 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 SH2D4AQ9H788 454 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 ARHGAP20Q9P2F6 1191 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 NENFQ9UMX5 172 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 FER1L6Q2WGJ9 1857 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 SHTN1A0MZ66 631 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 BTNL10A8MVZ5 291 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 RPS6KA5O75582 802 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 FGFR1OPO95684 399 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 IDEP14735 1019 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 KLK7P49862 253 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 MCCD1P59942 119 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 ASIC1P78348 528 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 GPS2Q13227 327 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 SMC1AQ14683 1233 aaKnown RBP7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 CDC42EP5Q6NZY7 148 aa7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 EPM2AIP1Q7L775 607 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 CCDC84Q86UT8 332 aaPredicted RBP7.94□□□□□ -1.14
CTNNA1-244ENST00000627109 SIAH1Q8IUQ4 282 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms