RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 CHMP4BP1P59074 171 aa19.09■□□□□ 0.65
UBE3D-208ENST00000626828 NIPA1Q7RTP0 329 aa19.09■□□□□ 0.65
UBE3D-208ENST00000626828 CYP2W1Q8TAV3 490 aa19.09■□□□□ 0.65
UBE3D-208ENST00000626828 GTF3C6Q969F1 213 aa19.09■□□□□ 0.65
UBE3D-208ENST00000626828 ZSCAN31Q96LW9 406 aaPredicted RBP19.09■□□□□ 0.65
UBE3D-208ENST00000626828 KCNH7Q9NS40 1196 aa19.09■□□□□ 0.65
UBE3D-208ENST00000626828 ORC3Q9UBD5 711 aaPredicted RBP19.09■□□□□ 0.65
UBE3D-208ENST00000626828 PCDHA4Q9UN74 947 aa19.09■□□□□ 0.65
UBE3D-208ENST00000626828 HAS3O00219 553 aa19.08■□□□□ 0.64
UBE3D-208ENST00000626828 ADAMTS3O15072 1205 aa19.08■□□□□ 0.64
UBE3D-208ENST00000626828 B4GALT4O60513 344 aa19.08■□□□□ 0.64
UBE3D-208ENST00000626828 CTDNEP1O95476 244 aa19.08■□□□□ 0.64
UBE3D-208ENST00000626828 KCNA2P16389 499 aa19.08■□□□□ 0.64
UBE3D-208ENST00000626828 ITGB8P26012 769 aa19.08■□□□□ 0.64
UBE3D-208ENST00000626828 SESTD1Q86VW0 696 aa19.08■□□□□ 0.64
UBE3D-208ENST00000626828 BLIDQ8IZY5 108 aa19.08■□□□□ 0.64
UBE3D-208ENST00000626828 CRYGNQ8WXF5 182 aa19.08■□□□□ 0.64
UBE3D-208ENST00000626828 GPR20Q99678 358 aa19.08■□□□□ 0.64
UBE3D-208ENST00000626828 GTF3C3Q9Y5Q9 886 aa19.08■□□□□ 0.64
UBE3D-208ENST00000626828 H3BRB1 525 aa19.07■□□□□ 0.64
UBE3D-208ENST00000626828 F2P00734 622 aa19.07■□□□□ 0.64
UBE3D-208ENST00000626828 ARP10275 920 aa19.07■□□□□ 0.64
UBE3D-208ENST00000626828 USP11P51784 963 aa19.07■□□□□ 0.64
UBE3D-208ENST00000626828 MFSD10Q14728 455 aa19.07■□□□□ 0.64
UBE3D-208ENST00000626828 KIAA0753Q2KHM9 967 aa19.07■□□□□ 0.64
UBE3D-208ENST00000626828 MFSD5Q6N075 450 aa19.07■□□□□ 0.64
UBE3D-208ENST00000626828 C7orf31Q8N865 590 aa19.07■□□□□ 0.64
UBE3D-208ENST00000626828 SEPT1Q8WYJ6 367 aa19.07■□□□□ 0.64
UBE3D-208ENST00000626828 AIFM3Q96NN9 605 aa19.07■□□□□ 0.64
UBE3D-208ENST00000626828 C16orf70Q9BSU1 422 aa19.07■□□□□ 0.64
UBE3D-208ENST00000626828 ALG1Q9BT22 464 aa19.07■□□□□ 0.64
UBE3D-208ENST00000626828 TUT1Q9H6E5 874 aaKnown RBP19.07■□□□□ 0.64
UBE3D-208ENST00000626828 TRMT13Q9NUP7 481 aaKnown RBP19.07■□□□□ 0.64
UBE3D-208ENST00000626828 LARGE1O95461 756 aa19.06■□□□□ 0.64
UBE3D-208ENST00000626828 FPGSQ05932 587 aa19.06■□□□□ 0.64
UBE3D-208ENST00000626828 RABEP1Q15276 862 aa19.06■□□□□ 0.64
UBE3D-208ENST00000626828 PLA2G4DQ86XP0 818 aa19.06■□□□□ 0.64
UBE3D-208ENST00000626828 TDHQ8IZJ6 230 aa19.06■□□□□ 0.64
UBE3D-208ENST00000626828 TMEM199Q8N511 208 aa19.06■□□□□ 0.64
UBE3D-208ENST00000626828 DAGLBQ8NCG7 672 aa19.06■□□□□ 0.64
UBE3D-208ENST00000626828 RASGRP4Q8TDF6 673 aa19.06■□□□□ 0.64
UBE3D-208ENST00000626828 SDF4Q9BRK5 362 aa19.06■□□□□ 0.64
UBE3D-208ENST00000626828 HIPK3Q9H422 1215 aa19.06■□□□□ 0.64
UBE3D-208ENST00000626828 PCDH10Q9P2E7 1040 aa19.06■□□□□ 0.64
UBE3D-208ENST00000626828 NOD1Q9Y239 953 aa19.06■□□□□ 0.64
UBE3D-208ENST00000626828 KAT6AQ92794 2004 aa19.06■□□□□ 0.64
UBE3D-208ENST00000626828 DOCK5Q9H7D0 1870 aa19.05■□□□□ 0.64
UBE3D-208ENST00000626828 NFASCO94856 1347 aa19.05■□□□□ 0.64
UBE3D-208ENST00000626828 LGALS2P05162 132 aa19.05■□□□□ 0.64
UBE3D-208ENST00000626828 ZNF286BP0CG31 522 aa19.05■□□□□ 0.64
UBE3D-208ENST00000626828 FDPSP14324 419 aaKnown RBP19.05■□□□□ 0.64
UBE3D-208ENST00000626828 CIITAP33076 1130 aa19.05■□□□□ 0.64
UBE3D-208ENST00000626828 SP4Q02446 784 aa19.05■□□□□ 0.64
UBE3D-208ENST00000626828 PHF20Q9BVI0 1012 aa19.05■□□□□ 0.64
UBE3D-208ENST00000626828 NOC4LQ9BVI4 516 aaKnown RBP19.05■□□□□ 0.64
UBE3D-208ENST00000626828 PPP1R12CQ9BZL4 782 aa19.05■□□□□ 0.64
UBE3D-208ENST00000626828 AGO4Q9HCK5 861 aaKnown RBP19.05■□□□□ 0.64
UBE3D-208ENST00000626828 PKD2L1Q9P0L9 805 aa19.05■□□□□ 0.64
UBE3D-208ENST00000626828 HDAC6Q9UBN7 1215 aa19.05■□□□□ 0.64
UBE3D-208ENST00000626828 GSTTP1A0A1W2PQM5 241 aa19.04■□□□□ 0.64
UBE3D-208ENST00000626828 FAM86B1E9PN63 330 aa19.04■□□□□ 0.64
UBE3D-208ENST00000626828 M0R2N6 131 aa19.04■□□□□ 0.64
UBE3D-208ENST00000626828 FAM86B2P0C5J1 330 aa19.04■□□□□ 0.64
UBE3D-208ENST00000626828 CYP2C18P33260 490 aa19.04■□□□□ 0.64
UBE3D-208ENST00000626828 PPIGQ13427 754 aaKnown RBP eCLIP19.04■□□□□ 0.64
UBE3D-208ENST00000626828 PTGISQ16647 500 aa19.04■□□□□ 0.64
UBE3D-208ENST00000626828 UTP14CQ5TAP6 766 aaKnown RBP19.04■□□□□ 0.64
UBE3D-208ENST00000626828 NSUN7Q8NE18 718 aaKnown RBP19.04■□□□□ 0.64
UBE3D-208ENST00000626828 PPP1R13LQ8WUF5 828 aa19.04■□□□□ 0.64
UBE3D-208ENST00000626828 JPH1Q9HDC5 661 aaPredicted RBP19.04■□□□□ 0.64
UBE3D-208ENST00000626828 SH2B1Q9NRF2 756 aaPredicted RBP19.04■□□□□ 0.64
UBE3D-208ENST00000626828 SLC9A2Q9UBY0 812 aa19.04■□□□□ 0.64
UBE3D-208ENST00000626828 GTF2IRD1Q9UHL9 959 aa19.04■□□□□ 0.64
UBE3D-208ENST00000626828 KCNJ14Q9UNX9 436 aa19.04■□□□□ 0.64
UBE3D-208ENST00000626828 TRIP12Q14669 1992 aaPredicted RBP19.03■□□□□ 0.64
UBE3D-208ENST00000626828 IGLV3-22A0A075B6J6 115 aa19.03■□□□□ 0.64
UBE3D-208ENST00000626828 CYP2C9P11712 490 aa19.03■□□□□ 0.64
UBE3D-208ENST00000626828 TCF7P36402 384 aaPredicted RBP19.03■□□□□ 0.64
UBE3D-208ENST00000626828 NPY5RQ15761 445 aa19.03■□□□□ 0.64
UBE3D-208ENST00000626828 GDF6Q6KF10 455 aaPredicted RBP19.03■□□□□ 0.64
UBE3D-208ENST00000626828 KRT25Q7Z3Z0 450 aa19.03■□□□□ 0.64
UBE3D-208ENST00000626828 RETREG2Q8NC44 543 aa19.03■□□□□ 0.64
UBE3D-208ENST00000626828 TBCKQ8TEA7 893 aa19.03■□□□□ 0.64
UBE3D-208ENST00000626828 LLPHQ9BRT6 129 aaKnown RBP19.03■□□□□ 0.64
UBE3D-208ENST00000626828 TBC1D22BQ9NU19 505 aa19.03■□□□□ 0.64
UBE3D-208ENST00000626828 ZNF215Q9UL58 517 aaPredicted RBP19.03■□□□□ 0.64
UBE3D-208ENST00000626828 ST18O60284 1047 aa19.02■□□□□ 0.64
UBE3D-208ENST00000626828 DTNBO60941 627 aa19.02■□□□□ 0.64
UBE3D-208ENST00000626828 SETQ01105 290 aaPredicted RBP19.02■□□□□ 0.64
UBE3D-208ENST00000626828 BFSP2Q13515 415 aa19.02■□□□□ 0.64
UBE3D-208ENST00000626828 NONOQ15233 471 aaKnown RBP eCLIP19.02■□□□□ 0.64
UBE3D-208ENST00000626828 PRR16Q569H4 304 aa19.02■□□□□ 0.64
UBE3D-208ENST00000626828 SMARCAD1Q9H4L7 1026 aa19.02■□□□□ 0.64
UBE3D-208ENST00000626828 TELO2Q9Y4R8 837 aa19.02■□□□□ 0.64
UBE3D-208ENST00000626828 LTBP2Q14767 1821 aa19.02■□□□□ 0.63
UBE3D-208ENST00000626828 IPO5O00410 1097 aaKnown RBP19.01■□□□□ 0.63
UBE3D-208ENST00000626828 GNAT1P11488 350 aa19.01■□□□□ 0.63
UBE3D-208ENST00000626828 CSF2RAP15509 400 aa19.01■□□□□ 0.63
UBE3D-208ENST00000626828 ITGB3BPQ13352 177 aaPredicted RBP19.01■□□□□ 0.63
UBE3D-208ENST00000626828 SHHQ15465 462 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms