RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 MAFGO15525 162 aa12.43□□□□□ -0.42
SSBP4-215ENST00000625926 EPB41L2O43491 1005 aaKnown RBP12.43□□□□□ -0.42
SSBP4-215ENST00000625926 PARNO95453 639 aaKnown RBP12.43□□□□□ -0.42
SSBP4-215ENST00000625926 LGALS2P05162 132 aa12.43□□□□□ -0.42
SSBP4-215ENST00000625926 SELPP16109 830 aa12.43□□□□□ -0.42
SSBP4-215ENST00000625926 COL9A1P20849 921 aa12.43□□□□□ -0.42
SSBP4-215ENST00000625926 CDC27P30260 824 aa12.43□□□□□ -0.42
SSBP4-215ENST00000625926 METAP2P50579 478 aaKnown RBP eCLIP12.43□□□□□ -0.42
SSBP4-215ENST00000625926 RBL2Q08999 1139 aa12.43□□□□□ -0.42
SSBP4-215ENST00000625926 GRIN2CQ14957 1233 aa12.43□□□□□ -0.42
SSBP4-215ENST00000625926 PPP1R18Q6NYC8 613 aa12.43□□□□□ -0.42
SSBP4-215ENST00000625926 FBXL16Q8N461 479 aa12.43□□□□□ -0.42
SSBP4-215ENST00000625926 MYLIPQ8WY64 445 aa12.43□□□□□ -0.42
SSBP4-215ENST00000625926 BRF1Q92994 677 aa12.43□□□□□ -0.42
SSBP4-215ENST00000625926 GPR20Q99678 358 aa12.43□□□□□ -0.42
SSBP4-215ENST00000625926 RIC8AQ9NPQ8 531 aa12.43□□□□□ -0.42
SSBP4-215ENST00000625926 FAM217BQ9NTX9 383 aaPredicted RBP12.43□□□□□ -0.42
SSBP4-215ENST00000625926 UBIAD1Q9Y5Z9 338 aa12.43□□□□□ -0.42
SSBP4-215ENST00000625926 C17orf102A2RUQ5 167 aa12.42□□□□□ -0.42
SSBP4-215ENST00000625926 SMCO2A6NFE2 343 aa12.42□□□□□ -0.42
SSBP4-215ENST00000625926 FOSP01100 380 aaPredicted RBP12.42□□□□□ -0.42
SSBP4-215ENST00000625926 CKBP12277 381 aa12.42□□□□□ -0.42
SSBP4-215ENST00000625926 FOSL2P15408 326 aa12.42□□□□□ -0.42
SSBP4-215ENST00000625926 ATP2A2P16615 1042 aaKnown RBP12.42□□□□□ -0.42
SSBP4-215ENST00000625926 ITGB5P18084 799 aa12.42□□□□□ -0.42
SSBP4-215ENST00000625926 RPS6KB1P23443 525 aa12.42□□□□□ -0.42
SSBP4-215ENST00000625926 ADD1P35611 737 aaKnown RBP12.42□□□□□ -0.42
SSBP4-215ENST00000625926 ZNF200P98182 395 aaPredicted RBP12.42□□□□□ -0.42
SSBP4-215ENST00000625926 APOBRQ0VD83 1088 aa12.42□□□□□ -0.42
SSBP4-215ENST00000625926 MTMR1Q13613 665 aa12.42□□□□□ -0.42
SSBP4-215ENST00000625926 TYW1BQ6NUM6 668 aa12.42□□□□□ -0.42
SSBP4-215ENST00000625926 LRRC8DQ7L1W4 858 aa12.42□□□□□ -0.42
SSBP4-215ENST00000625926 DHX38Q92620 1227 aaKnown RBP12.42□□□□□ -0.42
SSBP4-215ENST00000625926 GLT8D2Q9H1C3 349 aa12.42□□□□□ -0.42
SSBP4-215ENST00000625926 SLC28A3Q9HAS3 691 aa12.42□□□□□ -0.42
SSBP4-215ENST00000625926 BARHL2Q9NY43 387 aa12.42□□□□□ -0.42
SSBP4-215ENST00000625926 STXBP3O00186 592 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 ATP9AO75110 1047 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 BAIAP3O94812 1187 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 SMIM10L2AP0DMW4 78 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 SMIM10L2BP0DMW5 78 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 ADCY7P51828 1080 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 SP4Q02446 784 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 HIC1Q14526 733 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 UTP14CQ5TAP6 766 aaKnown RBP12.41□□□□□ -0.42
SSBP4-215ENST00000625926 ERICH6BQ5W0A0 696 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 PHOSPHO2Q8TCD6 241 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 PRUNE2Q8WUY3 3088 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 ATP6V0A1Q93050 837 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 NKX2-4Q9H2Z4 354 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 RNPEPQ9H4A4 650 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 JADE2Q9NQC1 790 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 ZNF215Q9UL58 517 aaPredicted RBP12.41□□□□□ -0.42
SSBP4-215ENST00000625926 PCDHA11Q9Y5I1 949 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 MCM3APO60318 1980 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 DNAH12Q6ZR08 3092 aa12.41□□□□□ -0.42
SSBP4-215ENST00000625926 GNAT1P11488 350 aa12.4□□□□□ -0.42
SSBP4-215ENST00000625926 KCNA2P16389 499 aa12.4□□□□□ -0.42
SSBP4-215ENST00000625926 RABGGTBP53611 331 aa12.4□□□□□ -0.42
SSBP4-215ENST00000625926 GPNMBQ14956 572 aa12.4□□□□□ -0.42
SSBP4-215ENST00000625926 PFKFB3Q16875 520 aaPredicted RBP12.4□□□□□ -0.42
SSBP4-215ENST00000625926 TRIM71Q2Q1W2 868 aaKnown RBP12.4□□□□□ -0.42
SSBP4-215ENST00000625926 ZNF618Q5T7W0 954 aa12.4□□□□□ -0.42
SSBP4-215ENST00000625926 SERINC5Q86VE9 423 aa12.4□□□□□ -0.42
SSBP4-215ENST00000625926 MAFAQ8NHW3 353 aaPredicted RBP12.4□□□□□ -0.42
SSBP4-215ENST00000625926 SEPT1Q8WYJ6 367 aa12.4□□□□□ -0.42
SSBP4-215ENST00000625926 SLC9A7Q96T83 725 aa12.4□□□□□ -0.42
SSBP4-215ENST00000625926 MXRA8Q9BRK3 442 aa12.4□□□□□ -0.42
SSBP4-215ENST00000625926 AGXT2Q9BYV1 514 aa12.4□□□□□ -0.42
SSBP4-215ENST00000625926 SETD4Q9NVD3 440 aa12.4□□□□□ -0.42
SSBP4-215ENST00000625926 PPP4R2Q9NY27 417 aa12.4□□□□□ -0.42
SSBP4-215ENST00000625926 PKD2L1Q9P0L9 805 aa12.4□□□□□ -0.42
SSBP4-215ENST00000625926 YBX2Q9Y2T7 364 aaKnown RBP12.4□□□□□ -0.42
SSBP4-215ENST00000625926 TELO2Q9Y4R8 837 aa12.4□□□□□ -0.42
SSBP4-215ENST00000625926 PRPF3O43395 683 aaKnown RBP12.39□□□□□ -0.43
SSBP4-215ENST00000625926 NBNO60934 754 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 CXCL10P02778 98 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 SCG2P13521 617 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 HOXC8P31273 242 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 TCF7P36402 384 aaPredicted RBP12.39□□□□□ -0.43
SSBP4-215ENST00000625926 THPOP40225 353 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 KCNJ6P48051 423 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 AKAP17AQ02040 695 aaKnown RBP12.39□□□□□ -0.43
SSBP4-215ENST00000625926 AP3B2Q13367 1082 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 CEP55Q53EZ4 464 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 CNKSR3Q6P9H4 555 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 RUFY3Q7L099 469 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 TRIM50Q86XT4 487 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 CCDC12Q8WUD4 166 aaPredicted RBP12.39□□□□□ -0.43
SSBP4-215ENST00000625926 WNT8BQ93098 351 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 PGBD1Q96JS3 809 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 GAS2L1Q99501 681 aaPredicted RBP12.39□□□□□ -0.43
SSBP4-215ENST00000625926 ANO3Q9BYT9 981 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 ZSWIM6Q9HCJ5 1215 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 KCNH7Q9NS40 1196 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 TMEM260Q9NX78 707 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 TTC28Q96AY4 2481 aa12.39□□□□□ -0.43
SSBP4-215ENST00000625926 ABHD14A-ACY1A0A1B0GW23 586 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 GSTTP1A0A1W2PQM5 241 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 RSPH10B2B2RC85 870 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms