RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 NBPF10Q6P3W6 841 aaKnown RBP12.05□□□□□ -0.48
VPS8-227ENST00000625842 DCP1BQ8IZD4 617 aaKnown RBP12.05□□□□□ -0.48
VPS8-227ENST00000625842 SCFD2Q8WU76 684 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 GAS2L1Q99501 681 aaPredicted RBP12.05□□□□□ -0.48
VPS8-227ENST00000625842 TSEN34Q9BSV6 310 aaKnown RBP12.05□□□□□ -0.48
VPS8-227ENST00000625842 MSTO1Q9BUK6 570 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 OSBPL5Q9H0X9 879 aaPredicted RBP12.05□□□□□ -0.48
VPS8-227ENST00000625842 FBXL21Q9UKT6 434 aa12.05□□□□□ -0.48
VPS8-227ENST00000625842 TSPOAP1O95153 1857 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 MARK3P27448 753 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 EFNA5P52803 228 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 MRPL47Q9HD33 250 aaKnown RBP12.04□□□□□ -0.48
VPS8-227ENST00000625842 PCDHA4Q9UN74 947 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 SYNRGQ9UMZ2 1314 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 LRG1P02750 347 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 ALDH7A1P49419 539 aaKnown RBP12.04□□□□□ -0.48
VPS8-227ENST00000625842 PPFIA1Q13136 1202 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 AOPEPQ8N6M6 819 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 SSH3Q8TE77 659 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 DHX38Q92620 1227 aaKnown RBP12.04□□□□□ -0.48
VPS8-227ENST00000625842 ATP6V1E2Q96A05 226 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 STAP1Q9ULZ2 295 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 SYNJ2BP-COX16A0A087WUM0 186 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 POLR2DO15514 142 aaKnown RBP12.04□□□□□ -0.48
VPS8-227ENST00000625842 KRT3P12035 628 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 SYT1P21579 422 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 HMGCS2P54868 508 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 DEFB132Q7Z7B7 95 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 CENPKQ9BS16 269 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 COX16Q9P0S2 106 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 PCDHB12Q9Y5F1 795 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 BZW2Q9Y6E2 419 aaKnown RBP12.04□□□□□ -0.48
VPS8-227ENST00000625842 ZMYM6O95789 1325 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 SPATA31A5Q5VU36 1347 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 SPATA31A7Q8IWB4 1347 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 MAP3K4Q9Y6R4 1608 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 MYOM2P54296 1465 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 CLDN3O15551 220 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 CA12O43570 354 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 MYL1P05976 194 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 AP3M2P53677 418 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 RASGRF1Q13972 1273 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 FAM83BQ5T0W9 1011 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 BEND3Q5T5X7 828 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 TOGARAM2Q6ZUX3 1019 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 NT5DC4Q86YG4 428 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 FAM151AQ8WW52 585 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 RAVER2Q9HCJ3 691 aaKnown RBP12.04□□□□□ -0.48
VPS8-227ENST00000625842 SEPT10Q9P0V9 454 aa12.04□□□□□ -0.48
VPS8-227ENST00000625842 SYNGAP1Q96PV0 1343 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 SYNMO15061 1565 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 TBC1D9BQ66K14 1250 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 PLEKHH3Q7Z736 793 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 MAGEB5Q9BZ81 275 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 TSHZ2Q9NRE2 1034 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 TRIM17Q9Y577 477 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 CTNND1O60716 968 aaKnown RBP12.03□□□□□ -0.48
VPS8-227ENST00000625842 RNASE9P60153 205 aaKnown RBP12.03□□□□□ -0.48
VPS8-227ENST00000625842 RBBP5Q15291 538 aaKnown RBP12.03□□□□□ -0.48
VPS8-227ENST00000625842 LRRC24Q50LG9 513 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 ADAT2Q7Z6V5 191 aaKnown RBP12.03□□□□□ -0.48
VPS8-227ENST00000625842 ASIC4Q96FT7 647 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 FOPNLQ96NB1 174 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 RUNDC3BQ96NL0 473 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 RPAP3Q9H6T3 665 aaPredicted RBP12.03□□□□□ -0.48
VPS8-227ENST00000625842 PARVGQ9HBI0 331 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 KDM6AO15550 1401 aaPredicted RBP12.03□□□□□ -0.48
VPS8-227ENST00000625842 ASAP2O43150 1006 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 MAGEA1P43355 309 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 GTF2H3Q13889 308 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 SOCS4Q8WXH5 440 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 YME1L1Q96TA2 773 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.03□□□□□ -0.48
VPS8-227ENST00000625842 KIAA1024Q9UPX6 916 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 FLT1P17948 1338 aa12.03□□□□□ -0.48
VPS8-227ENST00000625842 ARHGAP4P98171 946 aa12.02□□□□□ -0.48
VPS8-227ENST00000625842 NOSTRINQ8IVI9 506 aa12.02□□□□□ -0.48
VPS8-227ENST00000625842 TNIP3Q96KP6 325 aa12.02□□□□□ -0.48
VPS8-227ENST00000625842 MINPP1Q9UNW1 487 aa12.02□□□□□ -0.48
VPS8-227ENST00000625842 RPS6KA5O75582 802 aa12.02□□□□□ -0.48
VPS8-227ENST00000625842 HDLBPQ00341 1268 aaKnown RBP12.02□□□□□ -0.48
VPS8-227ENST00000625842 ADAM9Q13443 819 aa12.02□□□□□ -0.48
VPS8-227ENST00000625842 ARMC6Q6NXE6 501 aa12.02□□□□□ -0.48
VPS8-227ENST00000625842 USP50Q70EL3 339 aaPredicted RBP12.02□□□□□ -0.48
VPS8-227ENST00000625842 SDCCAG8Q86SQ7 713 aaPredicted RBP12.02□□□□□ -0.48
VPS8-227ENST00000625842 RRAGCQ9HB90 399 aa12.02□□□□□ -0.48
VPS8-227ENST00000625842 HMX1Q9NP08 348 aaPredicted RBP12.02□□□□□ -0.48
VPS8-227ENST00000625842 PLCB1Q9NQ66 1216 aa12.02□□□□□ -0.48
VPS8-227ENST00000625842 AMFRQ9UKV5 643 aa12.02□□□□□ -0.48
VPS8-227ENST00000625842 GUCA1BQ9UMX6 200 aa12.02□□□□□ -0.48
VPS8-227ENST00000625842 UTYO14607 1347 aa12.02□□□□□ -0.49
VPS8-227ENST00000625842 H7C4K7 107 aa12.02□□□□□ -0.49
VPS8-227ENST00000625842 MYO1FO00160 1098 aa12.02□□□□□ -0.49
VPS8-227ENST00000625842 TMCC1O94876 653 aa12.02□□□□□ -0.49
VPS8-227ENST00000625842 FBXW4P57775 412 aa12.02□□□□□ -0.49
VPS8-227ENST00000625842 DIXDC1Q155Q3 683 aa12.02□□□□□ -0.49
VPS8-227ENST00000625842 KCNK9Q9NPC2 374 aa12.02□□□□□ -0.49
VPS8-227ENST00000625842 NXF1Q9UBU9 619 aaKnown RBP12.02□□□□□ -0.49
VPS8-227ENST00000625842 CDC42BPGQ6DT37 1551 aa12.02□□□□□ -0.49
VPS8-227ENST00000625842 NCOA3Q9Y6Q9 1424 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms