RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 ANO1Q5XXA6 986 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 MAMDC4Q6UXC1 1216 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 TAS1R3Q7RTX0 852 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 RNF180Q86T96 592 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 C7orf61Q8IZ16 206 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 MAP4K1Q92918 833 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 ACDQ96AP0 544 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 ABHD16BQ9H3Z7 469 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 SPC25Q9HBM1 224 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 ANO2Q9NQ90 1003 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 A1CFQ9NQ94 594 aaKnown RBP7.45□□□□□ -1.22
TCF4-249ENST00000625716 XPNPEP3Q9NQH7 507 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 ADD3Q9UEY8 706 aaKnown RBP7.45□□□□□ -1.22
TCF4-249ENST00000625716 ZHX1Q9UKY1 873 aaPredicted RBP7.45□□□□□ -1.22
TCF4-249ENST00000625716 RBM8AQ9Y5S9 174 aaKnown RBP7.45□□□□□ -1.22
TCF4-249ENST00000625716 DOCK3Q8IZD9 2030 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 ZNF536O15090 1300 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 ZNF236Q9UL36 1845 aa7.45□□□□□ -1.22
TCF4-249ENST00000625716 KIAA0100Q14667 2235 aaKnown RBP7.44□□□□□ -1.22
TCF4-249ENST00000625716 B4DLN1 442 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 CDC45O75419 566 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 IGHA2P01877 340 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 ZNF865P0CJ78 1059 aaPredicted RBP7.44□□□□□ -1.22
TCF4-249ENST00000625716 SNHG28P0DPA3 235 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 TAL1P17542 331 aaPredicted RBP7.44□□□□□ -1.22
TCF4-249ENST00000625716 PHKA2P46019 1235 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 MRPL12P52815 198 aaKnown RBP7.44□□□□□ -1.22
TCF4-249ENST00000625716 CNTN2Q02246 1040 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 ACVR2BQ13705 512 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 WTAPQ15007 396 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 USH1GQ495M9 461 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 MUM1L1Q5H9M0 696 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 TMEM67Q5HYA8 995 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 RNF207Q6ZRF8 634 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 NOL8Q76FK4 1167 aaKnown RBP7.44□□□□□ -1.22
TCF4-249ENST00000625716 CYB5R4Q7L1T6 521 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 ARMCX2Q7L311 632 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 CATIPQ7Z7H3 387 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 CCDC144CPQ8IYA2 1237 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 UBA5Q9GZZ9 404 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 VAT1LQ9HCJ6 419 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 CYP39A1Q9NYL5 469 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 PRKAG2Q9UGJ0 569 aa7.44□□□□□ -1.22
TCF4-249ENST00000625716 COL11A1P12107 1806 aaPredicted RBP7.43□□□□□ -1.22
TCF4-249ENST00000625716 CCDC69A6NI79 296 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 KLRF2D3W0D1 207 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 RNF225M0QZC1 329 aaPredicted RBP7.43□□□□□ -1.22
TCF4-249ENST00000625716 SNAI1O95863 264 aaPredicted RBP7.43□□□□□ -1.22
TCF4-249ENST00000625716 COL6A1P12109 1028 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 CALML3P27482 149 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 MCM5P33992 734 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 ADCYAP1R1P41586 468 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 MARSP56192 900 aaKnown RBP7.43□□□□□ -1.22
TCF4-249ENST00000625716 TRAF1Q13077 416 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 BAATQ14032 418 aaPredicted RBP7.43□□□□□ -1.22
TCF4-249ENST00000625716 SUZ12Q15022 739 aaKnown RBP7.43□□□□□ -1.22
TCF4-249ENST00000625716 LRRC41Q15345 812 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 CDC37Q16543 378 aaPredicted RBP7.43□□□□□ -1.22
TCF4-249ENST00000625716 NFXL1Q6ZNB6 911 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 CHST3Q7LGC8 479 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 SKAP1Q86WV1 359 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 FBXO11Q86XK2 927 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 MCF2L2Q86YR7 1114 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 ADGRF4Q8IZF3 695 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 TMTC2Q8N394 836 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 FAM133AQ8N9E0 248 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 VTI1AQ96AJ9 217 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 LSG1Q9H089 658 aaKnown RBP7.43□□□□□ -1.22
TCF4-249ENST00000625716 NUCKS1Q9H1E3 243 aaKnown RBP7.43□□□□□ -1.22
TCF4-249ENST00000625716 ETNK1Q9HBU6 452 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 MRPL11Q9Y3B7 192 aaKnown RBP7.43□□□□□ -1.22
TCF4-249ENST00000625716 ABCB11O95342 1321 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 WDR19Q8NEZ3 1342 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 PARP14Q460N5 1801 aa7.43□□□□□ -1.22
TCF4-249ENST00000625716 NFIBO00712 420 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 SLC27A2O14975 620 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 PRC1O43663 620 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 ZEB2O60315 1214 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 DUSP11O75319 330 aaKnown RBP7.42□□□□□ -1.22
TCF4-249ENST00000625716 PGK1P00558 417 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 SYN1P17600 705 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 KIF5BP33176 963 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 TNFAIP2Q03169 654 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 VAC14Q08AM6 782 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 SEC23AQ15436 765 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 LRRC26Q2I0M4 334 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 CCDC144BQ3MJ40 725 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 C4orf17Q53FE4 359 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 HABP4Q5JVS0 413 aaKnown RBP7.42□□□□□ -1.22
TCF4-249ENST00000625716 CREB3L3Q68CJ9 461 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 IQSEC1Q6DN90 963 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 FOXR1Q6PIV2 292 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 SLC39A5Q6ZMH5 540 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 SYNE3Q6ZMZ3 975 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 EEPD1Q7L9B9 569 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 STAG2Q8N3U4 1231 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 PCSK9Q8NBP7 692 aaKnown RBP7.42□□□□□ -1.22
TCF4-249ENST00000625716 RGS22Q8NE09 1264 aa7.42□□□□□ -1.22
TCF4-249ENST00000625716 CTCFLQ8NI51 663 aaPredicted RBP7.42□□□□□ -1.22
TCF4-249ENST00000625716 NUP133Q8WUM0 1156 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms