RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-205	ENST00000625662	RDH13	Q8NBN7	331 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	MTR	Q99707	1265 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	MEGF6	O75095	1541 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	GPR75-ASB3	A0A0A6YYF3	556 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	RRN3P2	A6NIE6	340 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	MAFG	O15525	162 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	ODF2L	Q9ULJ1	636 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	PPP6R2	O75170	966 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	MMP1	P03956	469 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	STAG3L1	P0CL83	205 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	GSPT1	P15170	499 aa	Known RBP	12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	ARPP19	P56211	112 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	CXCL9	Q07325	125 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	KLHL30	Q0D2K2	578 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	NOG	Q13253	232 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	VEPH1	Q14D04	833 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	ZNF569	Q5MCW4	686 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	RAB3IL1	Q8TBN0	382 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	SOCS4	Q8WXH5	440 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	LRRC4	Q9HBW1	653 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	P4HB	P07237	508 aa	Known RBP	12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	BFSP2	Q13515	415 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	CYP26C1	Q6V0L0	522 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	RNF139	Q8WU17	664 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	ZDHHC15	Q96MV8	337 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	SLITRK6	Q9H5Y7	841 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	SERTAD1	Q9UHV2	236 aa		12.84	□□□□□ -0.35
CHD2-205	ENST00000625662	FAM196B	A6NMK8	535 aa		12.83	□□□□□ -0.35
CHD2-205	ENST00000625662	AKR1B1	P15121	316 aa		12.83	□□□□□ -0.35
CHD2-205	ENST00000625662	PSMC5	P62195	406 aa		12.83	□□□□□ -0.35
CHD2-205	ENST00000625662	ADAM9	Q13443	819 aa		12.83	□□□□□ -0.35
CHD2-205	ENST00000625662	HSP90AA4P	Q58FG1	418 aa		12.83	□□□□□ -0.35
CHD2-205	ENST00000625662	SRGAP1	Q7Z6B7	1085 aa		12.83	□□□□□ -0.35
CHD2-205	ENST00000625662	TIPIN	Q9BVW5	301 aa		12.83	□□□□□ -0.35
CHD2-205	ENST00000625662	SHTN1	A0MZ66	631 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	SRGAP2C	P0DJJ0	459 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	SKI	P12755	728 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	KRT81	Q14533	505 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	MAP7D3	Q8IWC1	876 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	YAF2	Q8IY57	180 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	CCDC26	Q8TAB7	109 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	NCAPG	Q9BPX3	1015 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	SPDYE2B	A6NHP3	402 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	RIOK3	O14730	519 aa	Known RBP	12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	SPDYE6	P0CI01	402 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	IFRD2	Q12894	506 aa	Predicted RBP	12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	UBE2S	Q16763	222 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	QRICH1	Q2TAL8	776 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	DEFB115	Q30KQ5	88 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	TAOK1	Q7L7X3	1001 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	EHD2	Q9NZN4	543 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	SLC9A2	Q9UBY0	812 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	CPSF3	Q9UKF6	684 aa	Known RBP	12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	CTAGE15	A4D2H0	777 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	CTAGE9	A4FU28	777 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	RNF8	O76064	485 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	CTAGE8	P0CG41	777 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	USP11	P51784	963 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	PPP4C	P60510	307 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	PFKFB3	Q16875	520 aa	Predicted RBP	12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	CTAGE6	Q86UF2	777 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	ZNF589	Q86UQ0	364 aa	Predicted RBP	12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	CTAGE4	Q8IX94	777 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	ZC3H15	Q8WU90	426 aa	Known RBP	12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	MSTO1	Q9BUK6	570 aa		12.83	□□□□□ -0.36
CHD2-205	ENST00000625662	FEZ2	Q9UHY8	353 aa	Predicted RBP	12.83	□□□□□ -0.36
CHD2-205	ENST00000625662		A0A1W2PRG0	241 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	LAMC2	Q13753	1193 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	NDUFAF2	Q8N183	169 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	IGSF22	Q8N9C0	903 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	DPF3	Q92784	378 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	ADGRB2	O60241	1585 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	CARNS1	A5YM72	827 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	VIM	P08670	466 aa	Known RBP	12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	EFNA5	P52803	228 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	CBX1	P83916	185 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	MYL7	Q01449	175 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	PPP4R3CP	Q6ZMV5	832 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	ZNF365	Q70YC5	407 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	ZSCAN30	Q86W11	494 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	SIX6OS1	Q8N1H7	587 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	CEP112	Q8N8E3	955 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	CCDC127	Q96BQ5	260 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	VPS16	Q9H269	839 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	NKRF	O15226	690 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	DYNC1LI2	O43237	492 aa	Predicted RBP	12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	HOXA2	O43364	376 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	DDN	O94850	711 aa	Predicted RBP	12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	XRCC6	P12956	609 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	QARS	P47897	775 aa	Known RBP	12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	TFAM	Q00059	246 aa	Known RBP	12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	DISC1	Q9NRI5	854 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	C3	P01024	1663 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	C16orf86	Q6ZW13	317 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	TBC1D31	Q96DN5	1066 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	TSKS	Q9UJT2	592 aa		12.82	□□□□□ -0.36
CHD2-205	ENST00000625662	ERICH4	A6NGS2	130 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	SLC26A4	O43511	780 aa		12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	RPN1	P04843	607 aa	Known RBP	12.81	□□□□□ -0.36
CHD2-205	ENST00000625662	PPFIA1	Q13136	1202 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms