RNA–Protein interactions for RNA: ENST00000622963.3

SNHG5-213, Transcript of small nucleolar RNA host gene 5, human

TSL 5 BASIC

Gene SNHG5, Length 753 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG5-213	ENST00000622963	NSUN3	Q9H649	340 aa	Known RBP	13.77	□□□□□ -0.21
SNHG5-213	ENST00000622963	FAM86C1	Q9NVL1	165 aa		13.77	□□□□□ -0.21
SNHG5-213	ENST00000622963	COL4A6	Q14031	1691 aa		13.76	□□□□□ -0.21
SNHG5-213	ENST00000622963	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	13.76	□□□□□ -0.21
SNHG5-213	ENST00000622963	MBTPS2	O43462	519 aa		13.76	□□□□□ -0.21
SNHG5-213	ENST00000622963	EFCAB14	O75071	495 aa		13.76	□□□□□ -0.21
SNHG5-213	ENST00000622963	TBX10	O75333	385 aa		13.76	□□□□□ -0.21
SNHG5-213	ENST00000622963	PARN	O95453	639 aa	Known RBP	13.76	□□□□□ -0.21
SNHG5-213	ENST00000622963	F2	P00734	622 aa		13.76	□□□□□ -0.21
SNHG5-213	ENST00000622963	HYAL1	Q12794	435 aa		13.76	□□□□□ -0.21
SNHG5-213	ENST00000622963	MFSD10	Q14728	455 aa		13.76	□□□□□ -0.21
SNHG5-213	ENST00000622963	SMAD2	Q15796	467 aa	Known RBP	13.76	□□□□□ -0.21
SNHG5-213	ENST00000622963	PTPRO	Q16827	1216 aa		13.76	□□□□□ -0.21
SNHG5-213	ENST00000622963	TMEM192	Q8IY95	271 aa		13.76	□□□□□ -0.21
SNHG5-213	ENST00000622963	MFSD14A	Q96MC6	490 aa		13.76	□□□□□ -0.21
SNHG5-213	ENST00000622963	TAAR1	Q96RJ0	339 aa		13.76	□□□□□ -0.21
SNHG5-213	ENST00000622963	TMEM47	Q9BQJ4	181 aa		13.76	□□□□□ -0.21
SNHG5-213	ENST00000622963	MYO15A	Q9UKN7	3530 aa		13.76	□□□□□ -0.21
SNHG5-213	ENST00000622963	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	13.76	□□□□□ -0.21
SNHG5-213	ENST00000622963	WDR19	Q8NEZ3	1342 aa		13.75	□□□□□ -0.21
SNHG5-213	ENST00000622963	LINC01565	O15544	149 aa		13.75	□□□□□ -0.21
SNHG5-213	ENST00000622963	AMH	P03971	560 aa		13.75	□□□□□ -0.21
SNHG5-213	ENST00000622963	ZFY	P08048	801 aa	Predicted RBP	13.75	□□□□□ -0.21
SNHG5-213	ENST00000622963	PDHB	P11177	359 aa		13.75	□□□□□ -0.21
SNHG5-213	ENST00000622963	KIAA0753	Q2KHM9	967 aa		13.75	□□□□□ -0.21
SNHG5-213	ENST00000622963	PLEKHG4	Q58EX7	1191 aa		13.75	□□□□□ -0.21
SNHG5-213	ENST00000622963	VPS53	Q5VIR6	699 aa		13.75	□□□□□ -0.21
SNHG5-213	ENST00000622963	C7orf31	Q8N865	590 aa		13.75	□□□□□ -0.21
SNHG5-213	ENST00000622963	NACAP1	Q9BZK3	213 aa		13.75	□□□□□ -0.21
SNHG5-213	ENST00000622963	GRM6	O15303	877 aa		13.74	□□□□□ -0.21
SNHG5-213	ENST00000622963	SORBS3	O60504	671 aa		13.74	□□□□□ -0.21
SNHG5-213	ENST00000622963	RANBP6	O60518	1105 aa	Known RBP	13.74	□□□□□ -0.21
SNHG5-213	ENST00000622963	UPP2	O95045	317 aa		13.74	□□□□□ -0.21
SNHG5-213	ENST00000622963	CSPG5	O95196	566 aa		13.74	□□□□□ -0.21
SNHG5-213	ENST00000622963	CAST	P20810	708 aa	Known RBP	13.74	□□□□□ -0.21
SNHG5-213	ENST00000622963	USH1G	Q495M9	461 aa		13.74	□□□□□ -0.21
SNHG5-213	ENST00000622963	ZMYM1	Q5SVZ6	1142 aa		13.74	□□□□□ -0.21
SNHG5-213	ENST00000622963	SYTL5	Q8TDW5	730 aa	Predicted RBP	13.74	□□□□□ -0.21
SNHG5-213	ENST00000622963	EDA	Q92838	391 aa		13.74	□□□□□ -0.21
SNHG5-213	ENST00000622963	YME1L1	Q96TA2	773 aa		13.74	□□□□□ -0.21
SNHG5-213	ENST00000622963	CTNNA3	Q9UI47	895 aa		13.74	□□□□□ -0.21
SNHG5-213	ENST00000622963	DDX41	Q9UJV9	622 aa	Known RBP	13.74	□□□□□ -0.21
SNHG5-213	ENST00000622963	SLC3A2	P08195	630 aa	Known RBP	13.73	□□□□□ -0.21
SNHG5-213	ENST00000622963	HOXD8	P13378	290 aa	Predicted RBP	13.73	□□□□□ -0.21
SNHG5-213	ENST00000622963	ZNF543	Q08ER8	600 aa		13.73	□□□□□ -0.21
SNHG5-213	ENST00000622963	DGKD	Q16760	1214 aa		13.73	□□□□□ -0.21
SNHG5-213	ENST00000622963	SERINC5	Q86VE9	423 aa		13.73	□□□□□ -0.21
SNHG5-213	ENST00000622963	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.73	□□□□□ -0.21
SNHG5-213	ENST00000622963	TOP1MT	Q969P6	601 aa		13.73	□□□□□ -0.21
SNHG5-213	ENST00000622963	SAMD11	Q96NU1	681 aa		13.73	□□□□□ -0.21
SNHG5-213	ENST00000622963	DDX19B	Q9UMR2	479 aa		13.73	□□□□□ -0.21
SNHG5-213	ENST00000622963	NLRC5	Q86WI3	1866 aa		13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	KMT2E	Q8IZD2	1858 aa		13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	SPTBN4	Q9H254	2564 aa		13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	TMEM221	A6NGB7	291 aa		13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	RSPH10B2	B2RC85	870 aa		13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963		M0R296	226 aa		13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	ORC4	O43929	436 aa		13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	FGR	P09769	529 aa		13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	RSPH10B	P0C881	870 aa		13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	GOLGA8H	P0CJ92	632 aa		13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	SNHG28	P0DPA3	235 aa		13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	TOP1	P11387	765 aa	Known RBP	13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	THPO	P40225	353 aa		13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	VCP	P55072	806 aa	Known RBP	13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	TRIM67	Q6ZTA4	783 aa		13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	BMP8A	Q7Z5Y6	402 aa		13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	EMID1	Q96A84	441 aa	Predicted RBP	13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	UPF3B	Q9BZI7	483 aa	Known RBP	13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	ANAPC4	Q9UJX5	808 aa		13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	FAM50B	Q9Y247	325 aa		13.72	□□□□□ -0.21
SNHG5-213	ENST00000622963	DMD	P11532	3685 aa		13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	PPP1R3G	B7ZBB8	358 aa		13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	STXBP3	O00186	592 aa		13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	GFRA3	O60609	400 aa		13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	CTSH	P09668	335 aa		13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	EIF2AK2	P19525	551 aa	Known RBP	13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	HOXC8	P31273	242 aa		13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	CTNNB1	P35222	781 aa		13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	SMAD4	Q13485	552 aa	Known RBP	13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	CAMK1	Q14012	370 aa		13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	HSDL1	Q3SXM5	330 aa		13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	PPTC7	Q8NI37	304 aa		13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	PI4K2B	Q8TCG2	481 aa		13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	DDX27	Q96GQ7	796 aa	Known RBP	13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	MPHOSPH6	Q99547	160 aa	Known RBP	13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	UBA5	Q9GZZ9	404 aa		13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	BCAS3	Q9H6U6	928 aa		13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	RC3H2	Q9HBD1	1191 aa	Known RBP	13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	RABGEF1	Q9UJ41	708 aa		13.71	□□□□□ -0.21
SNHG5-213	ENST00000622963	CACNA1A	O00555	2505 aa		13.7	□□□□□ -0.22
SNHG5-213	ENST00000622963	EMSY	Q7Z589	1322 aa		13.7	□□□□□ -0.22
SNHG5-213	ENST00000622963	C5orf67	F2Z3F1	127 aa		13.7	□□□□□ -0.22
SNHG5-213	ENST00000622963	TREH	O43280	583 aa		13.7	□□□□□ -0.22
SNHG5-213	ENST00000622963	RRP12	Q5JTH9	1297 aa	Known RBP	13.7	□□□□□ -0.22
SNHG5-213	ENST00000622963	RGS22	Q8NE09	1264 aa		13.7	□□□□□ -0.22
SNHG5-213	ENST00000622963	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	13.7	□□□□□ -0.22
SNHG5-213	ENST00000622963	PBXIP1	Q96AQ6	731 aa		13.7	□□□□□ -0.22
SNHG5-213	ENST00000622963	MSLNL	Q96KJ4	702 aa		13.7	□□□□□ -0.22
SNHG5-213	ENST00000622963	C16orf70	Q9BSU1	422 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms