RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 LENG1Q96BZ8 264 aaPredicted RBP22.44■■□□□ 1.18
PDLIM2-221ENST00000622702 AGO4Q9HCK5 861 aaKnown RBP22.44■■□□□ 1.18
PDLIM2-221ENST00000622702 PDGFCQ9NRA1 345 aa22.44■■□□□ 1.18
PDLIM2-221ENST00000622702 TNRC18O15417 2968 aaPredicted RBP22.43■■□□□ 1.18
PDLIM2-221ENST00000622702 FARP2O94887 1054 aaPredicted RBP22.43■■□□□ 1.18
PDLIM2-221ENST00000622702 OR52Z1P0C646 297 aa22.43■■□□□ 1.18
PDLIM2-221ENST00000622702 CCDC62Q6P9F0 684 aa22.43■■□□□ 1.18
PDLIM2-221ENST00000622702 HAS1Q92839 578 aa22.43■■□□□ 1.18
PDLIM2-221ENST00000622702 SLC5A5Q92911 643 aa22.43■■□□□ 1.18
PDLIM2-221ENST00000622702 XPNPEP3Q9NQH7 507 aa22.43■■□□□ 1.18
PDLIM2-221ENST00000622702 RCOR1Q9UKL0 485 aa22.43■■□□□ 1.18
PDLIM2-221ENST00000622702 MRVI1Q9Y6F6 885 aa22.43■■□□□ 1.18
PDLIM2-221ENST00000622702 TCHHQ07283 1943 aa22.43■■□□□ 1.18
PDLIM2-221ENST00000622702 IPO5O00410 1097 aaKnown RBP22.42■■□□□ 1.18
PDLIM2-221ENST00000622702 ADCY6O43306 1168 aa22.42■■□□□ 1.18
PDLIM2-221ENST00000622702 PRPHP41219 470 aa22.42■■□□□ 1.18
PDLIM2-221ENST00000622702 ADCYAP1R1P41586 468 aa22.42■■□□□ 1.18
PDLIM2-221ENST00000622702 TTLL4Q14679 1199 aa22.42■■□□□ 1.18
PDLIM2-221ENST00000622702 ARL6IP4Q66PJ3 421 aaKnown RBP22.42■■□□□ 1.18
PDLIM2-221ENST00000622702 SLFN12Q8IYM2 578 aa22.42■■□□□ 1.18
PDLIM2-221ENST00000622702 SENP7Q9BQF6 1050 aa22.42■■□□□ 1.18
PDLIM2-221ENST00000622702 ZNF577Q9BSK1 485 aa22.42■■□□□ 1.18
PDLIM2-221ENST00000622702 SCAND2PQ9GZW5 306 aaPredicted RBP22.42■■□□□ 1.18
PDLIM2-221ENST00000622702 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 BAG4O95429 457 aaKnown RBP22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 MYCNP04198 464 aaPredicted RBP22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 KCNA2P16389 499 aa22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 NCLP19338 710 aaKnown RBP22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 MNX1P50219 401 aaPredicted RBP22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 MLLT1Q03111 559 aaPredicted RBP22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 TNFAIP2Q03169 654 aa22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 STK38Q15208 465 aa22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 IQSEC1Q6DN90 963 aa22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 RIT2Q99578 217 aa22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 DDX41Q9UJV9 622 aaKnown RBP22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 ATP9AO75110 1047 aa22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 ARIH2O95376 493 aa22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 UBE2Q1Q7Z7E8 422 aa22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 ARRDC4Q8NCT1 418 aa22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 KCNG4Q8TDN1 519 aa22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 DIS3LQ8TF46 1054 aaKnown RBP22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 PAWRQ96IZ0 340 aaKnown RBP22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 TBC1D22BQ9NU19 505 aa22.41■■□□□ 1.18
PDLIM2-221ENST00000622702 NFASCO94856 1347 aa22.4■■□□□ 1.18
PDLIM2-221ENST00000622702 SPTLC2O15270 562 aa22.4■■□□□ 1.18
PDLIM2-221ENST00000622702 DHX15O43143 795 aaKnown RBP22.4■■□□□ 1.18
PDLIM2-221ENST00000622702 MARCH6O60337 910 aa22.4■■□□□ 1.18
PDLIM2-221ENST00000622702 PPP6R2O75170 966 aa22.4■■□□□ 1.18
PDLIM2-221ENST00000622702 DUSP11O75319 330 aaKnown RBP22.4■■□□□ 1.18
PDLIM2-221ENST00000622702 PGK1P00558 417 aa22.4■■□□□ 1.18
PDLIM2-221ENST00000622702 UBA1P22314 1058 aaKnown RBP22.4■■□□□ 1.18
PDLIM2-221ENST00000622702 SP2Q02086 613 aa22.4■■□□□ 1.18
PDLIM2-221ENST00000622702 ITGB3BPQ13352 177 aaPredicted RBP22.4■■□□□ 1.18
PDLIM2-221ENST00000622702 GJC2Q5T442 439 aaPredicted RBP22.4■■□□□ 1.18
PDLIM2-221ENST00000622702 GIMAP8Q8ND71 665 aaPredicted RBP22.4■■□□□ 1.18
PDLIM2-221ENST00000622702 LEO1Q8WVC0 666 aaPredicted RBP22.4■■□□□ 1.18
PDLIM2-221ENST00000622702 PSMD10O75832 226 aa22.39■■□□□ 1.17
PDLIM2-221ENST00000622702 TXNP10599 105 aaKnown RBP22.39■■□□□ 1.17
PDLIM2-221ENST00000622702 SMPD1P17405 629 aa22.39■■□□□ 1.17
PDLIM2-221ENST00000622702 NEDD9Q14511 834 aa22.39■■□□□ 1.17
PDLIM2-221ENST00000622702 TMEM63BQ5T3F8 832 aa22.39■■□□□ 1.17
PDLIM2-221ENST00000622702 LRCH2Q5VUJ6 765 aa22.39■■□□□ 1.17
PDLIM2-221ENST00000622702 NECAB2Q7Z6G3 386 aa22.39■■□□□ 1.17
PDLIM2-221ENST00000622702 SPATA32Q96LK8 384 aa22.39■■□□□ 1.17
PDLIM2-221ENST00000622702 SYNRGQ9UMZ2 1314 aa22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 DNM1LO00429 736 aa22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 NKRFO15226 690 aaKnown RBP eCLIP22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 GAS7O60861 476 aa22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 TXKP42681 527 aa22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 LRRC41Q15345 812 aa22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 LY6KQ17RY6 165 aa22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 DUSP28Q4G0W2 176 aa22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 RNF180Q86T96 592 aa22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 GJA10Q969M2 543 aa22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 FERMT2Q96AC1 680 aa22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 UIMC1Q96RL1 719 aa22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 SDF4Q9BRK5 362 aa22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 TTC12Q9H892 705 aaPredicted RBP22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 PKD2L1Q9P0L9 805 aa22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 PCDHA12Q9UN75 941 aa22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 SRPRBQ9Y5M8 271 aaKnown RBP22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 DNAH12Q6ZR08 3092 aa22.38■■□□□ 1.17
PDLIM2-221ENST00000622702 ADAMTS4O75173 837 aa22.37■■□□□ 1.17
PDLIM2-221ENST00000622702 MARCKSP29966 332 aaPredicted RBP22.37■■□□□ 1.17
PDLIM2-221ENST00000622702 FXR2P51116 673 aaKnown RBP eCLIP22.37■■□□□ 1.17
PDLIM2-221ENST00000622702 B3GNT9Q6UX72 402 aa22.37■■□□□ 1.17
PDLIM2-221ENST00000622702 DTHD1Q6ZMT9 781 aa22.37■■□□□ 1.17
PDLIM2-221ENST00000622702 TEKT3Q9BXF9 490 aa22.37■■□□□ 1.17
PDLIM2-221ENST00000622702 FBXO2Q9UK22 296 aaPredicted RBP22.37■■□□□ 1.17
PDLIM2-221ENST00000622702 VAV3Q9UKW4 847 aa22.37■■□□□ 1.17
PDLIM2-221ENST00000622702 GNEQ9Y223 722 aaKnown RBP22.37■■□□□ 1.17
PDLIM2-221ENST00000622702 KBTBD13C9JR72 458 aa22.36■■□□□ 1.17
PDLIM2-221ENST00000622702 PTGS1P23219 599 aa22.36■■□□□ 1.17
PDLIM2-221ENST00000622702 SPIRE1Q08AE8 756 aa22.36■■□□□ 1.17
PDLIM2-221ENST00000622702 IL17AQ16552 155 aa22.36■■□□□ 1.17
PDLIM2-221ENST00000622702 CELF3Q5SZQ8 465 aaKnown RBP22.36■■□□□ 1.17
PDLIM2-221ENST00000622702 METTL7BQ6UX53 244 aa22.36■■□□□ 1.17
PDLIM2-221ENST00000622702 KRI1Q8N9T8 703 aaKnown RBP22.36■■□□□ 1.17
PDLIM2-221ENST00000622702 GBP4Q96PP9 640 aa22.36■■□□□ 1.17
PDLIM2-221ENST00000622702 C11orf49Q9H6J7 331 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms