RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 LAMC2Q13753 1193 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 IER5Q5VY09 327 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 METTL23Q86XA0 190 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 REM2Q8IYK8 340 aaPredicted RBP10.03□□□□□ -0.8
HDAC9-229ENST00000622668 SPZ1Q9BXG8 430 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 MOV10L1Q9BXT6 1211 aaKnown RBP10.03□□□□□ -0.8
HDAC9-229ENST00000622668 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.03□□□□□ -0.8
HDAC9-229ENST00000622668 RFX7Q2KHR2 1363 aa10.03□□□□□ -0.8
HDAC9-229ENST00000622668 RHBDL3P58872 404 aa10.02□□□□□ -0.8
HDAC9-229ENST00000622668 DSTYKQ6XUX3 929 aa10.02□□□□□ -0.8
HDAC9-229ENST00000622668 STOX1Q6ZVD7 989 aa10.02□□□□□ -0.8
HDAC9-229ENST00000622668 AOPEPQ8N6M6 819 aa10.02□□□□□ -0.8
HDAC9-229ENST00000622668 MCPH1Q8NEM0 835 aa10.02□□□□□ -0.8
HDAC9-229ENST00000622668 SYMPKQ92797 1274 aaKnown RBP10.02□□□□□ -0.8
HDAC9-229ENST00000622668 POTEB3A0JP26 581 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 FAM170AA1A519 330 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 NFIBO00712 420 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 PTGS1P23219 599 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 LONP1P36776 959 aaKnown RBP10.02□□□□□ -0.81
HDAC9-229ENST00000622668 UBASH3AP57075 661 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 PPP1R18Q6NYC8 613 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 POTEBQ6S5H4 581 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 URGCPQ8TCY9 931 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 ERCC4Q92889 916 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-229ENST00000622668 ATP6V0A4Q9HBG4 840 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 PIN4Q9Y237 131 aaKnown RBP10.02□□□□□ -0.81
HDAC9-229ENST00000622668 ZBTB48P10074 688 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-229ENST00000622668 PPP1R2P41236 205 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 POSTNQ15063 836 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 GPIHBP1Q8IV16 184 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 FAM20AQ96MK3 541 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 NOC4LQ9BVI4 516 aaKnown RBP10.02□□□□□ -0.81
HDAC9-229ENST00000622668 ABHD16BQ9H3Z7 469 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 TOPORSQ9NS56 1045 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-229ENST00000622668 GDAQ9Y2T3 454 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 LAD1O00515 517 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 VWA5AO00534 786 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 EVI5O60447 810 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 SUPT20HL2P0C7V6 817 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 TMC6Q7Z403 805 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 GOLGA6L1Q8N7Z2 621 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 DYDC2Q96IM9 177 aa10.02□□□□□ -0.81
HDAC9-229ENST00000622668 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.02□□□□□ -0.81
HDAC9-229ENST00000622668 GAKO14976 1311 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 RPS6KA5O75582 802 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 USP2O75604 605 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-229ENST00000622668 PGK1P00558 417 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 P4HBP07237 508 aaKnown RBP10.01□□□□□ -0.81
HDAC9-229ENST00000622668 UBXN1Q04323 297 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 PRAMEF19Q5SWL8 479 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 RSRC2Q7L4I2 434 aaKnown RBP10.01□□□□□ -0.81
HDAC9-229ENST00000622668 PCIF1Q9H4Z3 704 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 RNF216Q9NWF9 866 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-229ENST00000622668 PDS5AQ29RF7 1337 aaKnown RBP10.01□□□□□ -0.81
HDAC9-229ENST00000622668 IGFBP4P22692 258 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 MRE11P49959 708 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 PSMC5P62195 406 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 ANO6Q4KMQ2 910 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 SGMS1Q86VZ5 419 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 RNF149Q8NC42 400 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 AFG1LQ8WV93 481 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 FERMT1Q9BQL6 677 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 ERAP1Q9NZ08 941 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 MTUS1Q9ULD2 1270 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 PCDHB6Q9Y5E3 794 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 LARGE1O95461 756 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 TNNC1P63316 161 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 CNTN2Q02246 1040 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 CCDC97Q96F63 343 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-229ENST00000622668 CTAGE1Q96RT6 745 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 CSRNP2Q9H175 543 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 SH3GLB2Q9NR46 395 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 NXF1Q9UBU9 619 aaKnown RBP10.01□□□□□ -0.81
HDAC9-229ENST00000622668 HESX1Q9UBX0 185 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 CLIC4Q9Y696 253 aa10.01□□□□□ -0.81
HDAC9-229ENST00000622668 ACTN2P35609 894 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 BFSP2Q13515 415 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 MCM6Q14566 821 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 ARHGAP44Q17R89 818 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 PADI6Q6TGC4 694 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 SHCBP1Q8NEM2 672 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 LXNQ9BS40 222 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 VPS16Q9H269 839 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 PARVGQ9HBI0 331 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 RIC8AQ9NPQ8 531 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 STRCQ7RTU9 1775 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 PLA2G4BP0C869 781 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 TAL1P17542 331 aaPredicted RBP10□□□□□ -0.81
HDAC9-229ENST00000622668 ZNF568Q3ZCX4 644 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 ARMCX2Q7L311 632 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 NKX2-3Q8TAU0 364 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 MTRQ99707 1265 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10□□□□□ -0.81
HDAC9-229ENST00000622668 PITPNM2Q9BZ72 1349 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 LTBP3Q9NS15 1303 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 MSCO60682 206 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 LBX1P52954 281 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 SKIDA1Q1XH10 827 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 LRP10Q7Z4F1 713 aa10□□□□□ -0.81
HDAC9-229ENST00000622668 OXER1Q8TDS5 423 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms