RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 ZNF185O15231 689 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 GFPT2O94808 682 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 STAT3P40763 770 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 CCT5P48643 541 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 COASYQ13057 564 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 RAD54LQ92698 747 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 SPZ1Q9BXG8 430 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 KCNK9Q9NPC2 374 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 LARSQ9P2J5 1176 aaKnown RBP14.07□□□□□ -0.16
MSH6-215ENST00000622629 A0A1W2PRG0 241 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 POTEFA5A3E0 1075 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 FOXP2O15409 715 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 RHOBTB3O94955 611 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 POTEIP0CG38 1075 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 ZNF18P17022 549 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 INPP5BP32019 993 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 SEPT2Q15019 361 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 POTEGQ6S5H5 508 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 POTEEQ6S8J3 1075 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 RUFY4Q6ZNE9 571 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 FAM186BQ8IYM0 893 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 UBL4BQ8N7F7 174 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 IPO4Q8TEX9 1081 aaKnown RBP14.07□□□□□ -0.16
MSH6-215ENST00000622629 IMPG2Q9BZV3 1241 aa14.07□□□□□ -0.16
MSH6-215ENST00000622629 VEGFAP15692 232 aaPredicted RBP14.06□□□□□ -0.16
MSH6-215ENST00000622629 ELOA2Q8IYF1 753 aaPredicted RBP14.06□□□□□ -0.16
MSH6-215ENST00000622629 CCDC105Q8IYK2 499 aa14.06□□□□□ -0.16
MSH6-215ENST00000622629 GUF1Q8N442 669 aaKnown RBP14.06□□□□□ -0.16
MSH6-215ENST00000622629 NOA1Q8NC60 698 aaKnown RBP14.06□□□□□ -0.16
MSH6-215ENST00000622629 FLT1P17948 1338 aa14.06□□□□□ -0.16
MSH6-215ENST00000622629 E7EVH7 732 aa14.06□□□□□ -0.16
MSH6-215ENST00000622629 SERPING1P05155 500 aa14.06□□□□□ -0.16
MSH6-215ENST00000622629 NT5C2P49902 561 aa14.06□□□□□ -0.16
MSH6-215ENST00000622629 CTTNQ14247 550 aaKnown RBP14.06□□□□□ -0.16
MSH6-215ENST00000622629 PPM1KQ8N3J5 372 aa14.06□□□□□ -0.16
MSH6-215ENST00000622629 MMS19Q96T76 1030 aa14.06□□□□□ -0.16
MSH6-215ENST00000622629 GCNT4Q9P109 453 aa14.06□□□□□ -0.16
MSH6-215ENST00000622629 FAM205AQ6ZU69 1335 aa14.06□□□□□ -0.16
MSH6-215ENST00000622629 KIF4AO95239 1232 aa14.06□□□□□ -0.16
MSH6-215ENST00000622629 GH2P01242 217 aa14.06□□□□□ -0.16
MSH6-215ENST00000622629 QRICH1Q2TAL8 776 aa14.06□□□□□ -0.16
MSH6-215ENST00000622629 FAM83BQ5T0W9 1011 aa14.06□□□□□ -0.16
MSH6-215ENST00000622629 TESPA1A2RU30 521 aaPredicted RBP14.06□□□□□ -0.16
MSH6-215ENST00000622629 VIMP08670 466 aaKnown RBP14.06□□□□□ -0.16
MSH6-215ENST00000622629 ERVK-24P63145 666 aa14.06□□□□□ -0.16
MSH6-215ENST00000622629 TTLL12Q14166 644 aaPredicted RBP14.06□□□□□ -0.16
MSH6-215ENST00000622629 ALKBH5Q6P6C2 394 aaKnown RBP14.06□□□□□ -0.16
MSH6-215ENST00000622629 B4GALNT4Q76KP1 1039 aa14.06□□□□□ -0.16
MSH6-215ENST00000622629 GIMAP8Q8ND71 665 aaPredicted RBP14.06□□□□□ -0.16
MSH6-215ENST00000622629 MYMKA6NI61 221 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 EIF3CLB5ME19 914 aaKnown RBP14.05□□□□□ -0.16
MSH6-215ENST00000622629 SORBS3O60504 671 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 CALRP27797 417 aaKnown RBP14.05□□□□□ -0.16
MSH6-215ENST00000622629 EPHB4P54760 987 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 DEFB132Q7Z7B7 95 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 EIF3CQ99613 913 aaKnown RBP14.05□□□□□ -0.16
MSH6-215ENST00000622629 SYNCQ9H7C4 482 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 MTMR4Q9NYA4 1195 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 RIC1Q4ADV7 1423 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 ITIH6Q6UXX5 1313 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 SRGNP10124 158 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 DPH6Q7L8W6 267 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 SFR1Q86XK3 245 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 PCIF1Q9H4Z3 704 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 ASIC3Q9UHC3 531 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 MRPL11Q9Y3B7 192 aaKnown RBP14.05□□□□□ -0.16
MSH6-215ENST00000622629 ESYT3A0FGR9 886 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 HGSO14964 777 aaPredicted RBP14.05□□□□□ -0.16
MSH6-215ENST00000622629 PALMO75781 387 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 MMP10P09238 476 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 TRIM65Q6PJ69 517 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 TMC4Q7Z404 712 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 NFU1Q9UMS0 254 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 PACSIN2Q9UNF0 486 aaPredicted RBP14.05□□□□□ -0.16
MSH6-215ENST00000622629 DAGLAQ9Y4D2 1042 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 BCL9O00512 1426 aa14.05□□□□□ -0.16
MSH6-215ENST00000622629 SARSP49591 514 aaKnown RBP14.04□□□□□ -0.16
MSH6-215ENST00000622629 ARHGAP4P98171 946 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 KCNH2Q12809 1159 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 SYDE2Q5VT97 1194 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 MCTP2Q6DN12 878 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 PRR5LQ6MZQ0 368 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 TMED8Q6PL24 325 aaPredicted RBP14.04□□□□□ -0.16
MSH6-215ENST00000622629 MXD3Q9BW11 206 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 AP1M1Q9BXS5 423 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 TDRD3Q9H7E2 651 aaKnown RBP14.04□□□□□ -0.16
MSH6-215ENST00000622629 MAD2L2Q9UI95 211 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 GOLGA8KD6RF30 607 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 H2AFXP16104 143 aaPredicted RBP14.04□□□□□ -0.16
MSH6-215ENST00000622629 EVX2Q03828 476 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 PLCD4Q9BRC7 762 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 ZNF577Q9BSK1 485 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 DHX36Q9H2U1 1008 aaKnown RBP14.04□□□□□ -0.16
MSH6-215ENST00000622629 CAMTA1Q9Y6Y1 1673 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 CRKP46108 304 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 USP14P54578 494 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 FAM102BQ5T8I3 360 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 TBC1D16Q8TBP0 767 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 KIFAP3Q92845 792 aa14.04□□□□□ -0.16
MSH6-215ENST00000622629 CABS1Q96KC9 395 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms