RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 OSBPL9Q96SU4 736 aa10.63□□□□□ -0.71
IGHV3-54-201ENST00000622166 KCTD10Q9H3F6 313 aa10.63□□□□□ -0.71
IGHV3-54-201ENST00000622166 DEF6Q9H4E7 631 aa10.63□□□□□ -0.71
IGHV3-54-201ENST00000622166 RNF14Q9UBS8 474 aa10.63□□□□□ -0.71
IGHV3-54-201ENST00000622166 CAPN6Q9Y6Q1 641 aa10.63□□□□□ -0.71
IGHV3-54-201ENST00000622166 E9PMD0 336 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 RIMBP2O15034 1052 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 MARCH6O60337 910 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 NPM3O75607 178 aaKnown RBP10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 HMGB2P26583 209 aaKnown RBP10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 LMAN1P49257 510 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 EIF6P56537 245 aaKnown RBP10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 FKBP1AP62942 108 aaKnown RBP10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 C2orf54Q08AI8 447 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 ZSCAN26Q16670 478 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 QRICH1Q2TAL8 776 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 SLC9C1Q4G0N8 1177 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 GLE1Q53GS7 698 aaKnown RBP10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 APOBEC3HQ6NTF7 200 aaKnown RBP10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 CACNA2D4Q7Z3S7 1137 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 GPBP1Q86WP2 473 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 SLFN12Q8IYM2 578 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 SPATA4Q8NEY3 305 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 TEKT1Q969V4 418 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 CCDC102AQ96A19 550 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 NOX5Q96PH1 765 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 LSM14BQ9BX40 385 aaKnown RBP10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 ANO3Q9BYT9 981 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 GANQ9H2C0 597 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 DHX36Q9H2U1 1008 aaKnown RBP10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 LUC7LQ9NQ29 371 aaKnown RBP10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 JADE2Q9NQC1 790 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 AIPL1Q9NZN9 384 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 CWC15Q9P013 229 aaKnown RBP10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 MYH10P35580 1976 aa10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 ZNF646O15015 1829 aaPredicted RBP10.62□□□□□ -0.71
IGHV3-54-201ENST00000622166 ATP8B3O60423 1300 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 BTNL10A8MVZ5 291 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 TLR2O60603 784 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 IVLP07476 585 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 NPR1P16066 1061 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 SLC16A2P36021 539 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 TNNT3P45378 269 aaPredicted RBP10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 SLC12A3P55017 1021 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 HDLBPQ00341 1268 aaKnown RBP10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 NAB2Q15742 525 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 Q4G0T1 1027 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 FAM83BQ5T0W9 1011 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 KLHDC7AQ5VTJ3 777 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 DPY19L2P1Q6NXN4 242 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 KCTD1Q719H9 257 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 TEX2Q8IWB9 1127 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 KCTD17Q8N5Z5 321 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 SCFD1Q8WVM8 642 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 SELENOOQ9BVL4 669 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 TLR10Q9BXR5 811 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 ZC3H12CQ9C0D7 883 aaKnown RBP10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 KANSL2Q9H9L4 492 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 EMILIN3Q9NT22 766 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 KIAA1024Q9UPX6 916 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 TRAF3IP3Q9Y228 551 aa10.61□□□□□ -0.71
IGHV3-54-201ENST00000622166 GRID2IPA4D2P6 1211 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 F8W031 263 aaPredicted RBP10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 CETN3O15182 167 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 RNF40O75150 1001 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 MED24O75448 989 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 FOSP01100 380 aaPredicted RBP10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 MYBL2P10244 700 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 ANXA13P27216 316 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 CIITAP33076 1130 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 SLC1A4P43007 532 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 PAFAH1B1P43034 410 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 GFPT1Q06210 699 aaPredicted RBP10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 SPIRE1Q08AE8 756 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 NNTQ13423 1086 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 SF3B2Q13435 895 aaKnown RBP10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 ARSHQ5FYA8 562 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 HERC4Q5GLZ8 1057 aaPredicted RBP10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 C10orf76Q5T2E6 689 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 SLFN13Q68D06 897 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 LEKR1Q6ZMV7 388 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 EPM2AIP1Q7L775 607 aaPredicted RBP10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 FRMD5Q7Z6J6 570 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 SYT2Q8N9I0 419 aaPredicted RBP10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 ERMNQ8TAM6 284 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 ETNPPLQ8TBG4 499 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 AFAP1L1Q8TED9 768 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 CAVIN3Q969G5 261 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 ZDHHC15Q96MV8 337 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 CRACR2AQ9BSW2 395 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 LRRC1Q9BTT6 524 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 IDI2Q9BXS1 227 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 FGFBP2Q9BYJ0 223 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 TANGO6Q9C0B7 1094 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 DNAJC18Q9H819 358 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 PLCB1Q9NQ66 1216 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 RNF216Q9NWF9 866 aaPredicted RBP10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 SALL4Q9UJQ4 1053 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 PCDHA1Q9Y5I3 950 aa10.6□□□□□ -0.71
IGHV3-54-201ENST00000622166 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms