RNA–Protein interactions for RNA: ENST00000621396.4

CBWD3-216, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-216ENST00000621396 SPATA31C1P0DKV0 1188 aa17.86■□□□□ 0.45
CBWD3-216ENST00000621396 FCER1AP12319 257 aa17.86■□□□□ 0.45
CBWD3-216ENST00000621396 TAF1CQ15572 869 aaPredicted RBP17.86■□□□□ 0.45
CBWD3-216ENST00000621396 SAMD3Q8N6K7 520 aa17.86■□□□□ 0.45
CBWD3-216ENST00000621396 FAM133AQ8N9E0 248 aa17.86■□□□□ 0.45
CBWD3-216ENST00000621396 TUBE1Q9UJT0 475 aa17.86■□□□□ 0.45
CBWD3-216ENST00000621396 RBBP6Q7Z6E9 1792 aaKnown RBP17.86■□□□□ 0.45
CBWD3-216ENST00000621396 PFASO15067 1338 aa17.86■□□□□ 0.45
CBWD3-216ENST00000621396 LCTP09848 1927 aa17.86■□□□□ 0.45
CBWD3-216ENST00000621396 SSBP05455 408 aaKnown RBP eCLIP17.86■□□□□ 0.45
CBWD3-216ENST00000621396 DPYDQ12882 1025 aa17.86■□□□□ 0.45
CBWD3-216ENST00000621396 SMARCE1Q969G3 411 aa17.86■□□□□ 0.45
CBWD3-216ENST00000621396 FGD4Q96M96 766 aa17.86■□□□□ 0.45
CBWD3-216ENST00000621396 EIF2AK1Q9BQI3 630 aaKnown RBP17.86■□□□□ 0.45
CBWD3-216ENST00000621396 POLD4Q9HCU8 107 aa17.86■□□□□ 0.45
CBWD3-216ENST00000621396 MAN1B1Q9UKM7 699 aa17.86■□□□□ 0.45
CBWD3-216ENST00000621396 SLC45A1Q9Y2W3 748 aa17.86■□□□□ 0.45
CBWD3-216ENST00000621396 PTGS1P23219 599 aa17.85■□□□□ 0.45
CBWD3-216ENST00000621396 SP2Q02086 613 aa17.85■□□□□ 0.45
CBWD3-216ENST00000621396 RAD51AP2Q09MP3 1159 aa17.85■□□□□ 0.45
CBWD3-216ENST00000621396 IFNL1Q8IU54 200 aa17.85■□□□□ 0.45
CBWD3-216ENST00000621396 TPH2Q8IWU9 490 aa17.85■□□□□ 0.45
CBWD3-216ENST00000621396 WRAP73Q9P2S5 460 aaPredicted RBP17.85■□□□□ 0.45
CBWD3-216ENST00000621396 SAMM50Q9Y512 469 aa17.85■□□□□ 0.45
CBWD3-216ENST00000621396 MANSC4A6NHS7 340 aaPredicted RBP17.84■□□□□ 0.45
CBWD3-216ENST00000621396 ZNF165P49910 485 aa17.84■□□□□ 0.45
CBWD3-216ENST00000621396 STX1AQ16623 288 aa17.84■□□□□ 0.45
CBWD3-216ENST00000621396 KANK3Q6NY19 840 aa17.84■□□□□ 0.45
CBWD3-216ENST00000621396 DYMQ7RTS9 669 aa17.84■□□□□ 0.45
CBWD3-216ENST00000621396 BANK1Q8NDB2 785 aa17.84■□□□□ 0.45
CBWD3-216ENST00000621396 PIGOQ8TEQ8 1089 aa17.84■□□□□ 0.45
CBWD3-216ENST00000621396 DYDC2Q96IM9 177 aa17.84■□□□□ 0.45
CBWD3-216ENST00000621396 KBTBD4Q9NVX7 518 aa17.84■□□□□ 0.45
CBWD3-216ENST00000621396 HOOK1Q9UJC3 728 aaKnown RBP17.84■□□□□ 0.45
CBWD3-216ENST00000621396 AOC2O75106 756 aa17.84■□□□□ 0.45
CBWD3-216ENST00000621396 ADORA2AP29274 412 aa17.84■□□□□ 0.45
CBWD3-216ENST00000621396 INPP4AQ96PE3 977 aaPredicted RBP17.84■□□□□ 0.45
CBWD3-216ENST00000621396 TEKT3Q9BXF9 490 aa17.84■□□□□ 0.45
CBWD3-216ENST00000621396 MROH8Q9H579 483 aa17.84■□□□□ 0.45
CBWD3-216ENST00000621396 CBX8Q9HC52 389 aa17.84■□□□□ 0.45
CBWD3-216ENST00000621396 BCRP11274 1271 aa17.83■□□□□ 0.45
CBWD3-216ENST00000621396 SARSP49591 514 aaKnown RBP17.83■□□□□ 0.45
CBWD3-216ENST00000621396 PLCB2Q00722 1185 aa17.83■□□□□ 0.45
CBWD3-216ENST00000621396 CACNB1Q02641 598 aaPredicted RBP17.83■□□□□ 0.45
CBWD3-216ENST00000621396 STXBP2Q15833 593 aa17.83■□□□□ 0.45
CBWD3-216ENST00000621396 TMEM63BQ5T3F8 832 aa17.83■□□□□ 0.45
CBWD3-216ENST00000621396 DNERQ8NFT8 737 aa17.83■□□□□ 0.45
CBWD3-216ENST00000621396 LARP4BQ92615 738 aaKnown RBP17.83■□□□□ 0.45
CBWD3-216ENST00000621396 SH2D3AQ9BRG2 576 aa17.83■□□□□ 0.45
CBWD3-216ENST00000621396 COBLO75128 1261 aa17.83■□□□□ 0.44
CBWD3-216ENST00000621396 SLITRK3O94933 977 aa17.83■□□□□ 0.44
CBWD3-216ENST00000621396 GCLCP48506 637 aaPredicted RBP17.83■□□□□ 0.44
CBWD3-216ENST00000621396 PPP2R5CQ13362 524 aa17.83■□□□□ 0.44
CBWD3-216ENST00000621396 HPS3Q969F9 1004 aa17.83■□□□□ 0.44
CBWD3-216ENST00000621396 MAPK8IP1Q9UQF2 711 aa17.83■□□□□ 0.44
CBWD3-216ENST00000621396 DNAJC25-GNG10A0A024R161 153 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 CCNE2O96020 404 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 MRE11P49959 708 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 CCNA1P78396 465 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 TMEM119Q4V9L6 283 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 GPR142Q7Z601 462 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 SPATA20Q8TB22 786 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 RAD54LQ92698 747 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 ANO10Q9NW15 660 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 NPHP3-ACAD11A0A0J9YXS1 232 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 MYMKA6NI61 221 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 RPA1P27694 616 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 NLRP12P59046 1061 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 PDE4DQ08499 809 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 HAUS3Q68CZ6 603 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 CCDC102AQ96A19 550 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 HSD17B14Q9BPX1 270 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 MORF4L1Q9UBU8 362 aa17.82■□□□□ 0.44
CBWD3-216ENST00000621396 ADD3Q9UEY8 706 aaKnown RBP17.82■□□□□ 0.44
CBWD3-216ENST00000621396 CRHR2Q13324 411 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 FAM110CQ1W6H9 321 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 NT5DC1Q5TFE4 455 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 B3GNT9Q6UX72 402 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 SV2BQ7L1I2 683 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 NIPA1Q7RTP0 329 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 FBXO16Q8IX29 292 aaPredicted RBP17.81■□□□□ 0.44
CBWD3-216ENST00000621396 RIT2Q99578 217 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 PYM1Q9BRP8 204 aaKnown RBP17.81■□□□□ 0.44
CBWD3-216ENST00000621396 TRIM9Q9C026 710 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 USP25Q9UHP3 1055 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 TMEM150BA6NC51 233 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 EIF3JO75822 258 aaKnown RBP17.81■□□□□ 0.44
CBWD3-216ENST00000621396 KCNA2P16389 499 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 CYFIP1Q7L576 1253 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 MIER3Q7Z3K6 550 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 NLRX1Q86UT6 975 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 ELOA2Q8IYF1 753 aaPredicted RBP17.81■□□□□ 0.44
CBWD3-216ENST00000621396 ERMNQ8TAM6 284 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 FAM200AQ8TCP9 573 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 CCDC34Q96HJ3 373 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 IWS1Q96ST2 819 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 IVNS1ABPQ9Y6Y0 642 aa17.81■□□□□ 0.44
CBWD3-216ENST00000621396 GTPBP6O43824 516 aaPredicted RBP17.8■□□□□ 0.44
CBWD3-216ENST00000621396 RPN1P04843 607 aaKnown RBP17.8■□□□□ 0.44
CBWD3-216ENST00000621396 LY6KQ17RY6 165 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms