RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 SENP7Q9BQF6 1050 aa27.59■■■□□ 2.01
ATXN3-253ENST00000621269 RBM28Q9NW13 759 aaKnown RBP27.59■■■□□ 2.01
ATXN3-253ENST00000621269 CHD9Q3L8U1 2897 aa27.59■■■□□ 2.01
ATXN3-253ENST00000621269 SPDYE3A6NKU9 549 aa27.58■■■□□ 2.01
ATXN3-253ENST00000621269 NBNO60934 754 aa27.58■■■□□ 2.01
ATXN3-253ENST00000621269 CXCL10P02778 98 aa27.58■■■□□ 2.01
ATXN3-253ENST00000621269 EXOSC10Q01780 885 aaKnown RBP27.58■■■□□ 2.01
ATXN3-253ENST00000621269 ADGRE1Q14246 886 aa27.58■■■□□ 2.01
ATXN3-253ENST00000621269 HIC1Q14526 733 aa27.58■■■□□ 2.01
ATXN3-253ENST00000621269 TRIM71Q2Q1W2 868 aaKnown RBP27.58■■■□□ 2.01
ATXN3-253ENST00000621269 TSGA10IPQ3SY00 556 aa27.58■■■□□ 2.01
ATXN3-253ENST00000621269 APOA5Q6Q788 366 aa27.58■■■□□ 2.01
ATXN3-253ENST00000621269 ATP6V0A1Q93050 837 aa27.58■■■□□ 2.01
ATXN3-253ENST00000621269 SMIM10L2AP0DMW4 78 aa27.57■■■□□ 2
ATXN3-253ENST00000621269 SMIM10L2BP0DMW5 78 aa27.57■■■□□ 2
ATXN3-253ENST00000621269 UBE2SQ16763 222 aa27.57■■■□□ 2
ATXN3-253ENST00000621269 SERINC5Q86VE9 423 aa27.57■■■□□ 2
ATXN3-253ENST00000621269 WNT8BQ93098 351 aa27.57■■■□□ 2
ATXN3-253ENST00000621269 CDHR1Q96JP9 859 aa27.57■■■□□ 2
ATXN3-253ENST00000621269 TCEANC2Q96MN5 208 aa27.57■■■□□ 2
ATXN3-253ENST00000621269 ZNF215Q9UL58 517 aaPredicted RBP27.57■■■□□ 2
ATXN3-253ENST00000621269 ZBTB43O43298 467 aa27.56■■■□□ 2
ATXN3-253ENST00000621269 THPOP40225 353 aa27.56■■■□□ 2
ATXN3-253ENST00000621269 WDR5P61964 334 aaKnown RBP27.56■■■□□ 2
ATXN3-253ENST00000621269 SP4Q02446 784 aa27.56■■■□□ 2
ATXN3-253ENST00000621269 UTP14CQ5TAP6 766 aaKnown RBP27.56■■■□□ 2
ATXN3-253ENST00000621269 RASEFQ8IZ41 740 aa27.56■■■□□ 2
ATXN3-253ENST00000621269 GPRASP2Q96D09 838 aa27.56■■■□□ 2
ATXN3-253ENST00000621269 EHMT1Q9H9B1 1298 aa27.56■■■□□ 2
ATXN3-253ENST00000621269 ABHD14A-ACY1A0A1B0GW23 586 aa27.55■■■□□ 2
ATXN3-253ENST00000621269 TLL1O43897 1013 aa27.55■■■□□ 2
ATXN3-253ENST00000621269 HMGB1P09429 215 aaKnown RBP27.55■■■□□ 2
ATXN3-253ENST00000621269 GNAT1P11488 350 aa27.55■■■□□ 2
ATXN3-253ENST00000621269 IKBKEQ14164 716 aa27.55■■■□□ 2
ATXN3-253ENST00000621269 CCDC85BQ15834 202 aaPredicted RBP27.55■■■□□ 2
ATXN3-253ENST00000621269 RTN1Q16799 776 aa27.55■■■□□ 2
ATXN3-253ENST00000621269 ADCK5Q3MIX3 580 aa27.55■■■□□ 2
ATXN3-253ENST00000621269 CCDC136Q96JN2 1154 aa27.55■■■□□ 2
ATXN3-253ENST00000621269 ZBED2Q9BTP6 218 aa27.55■■■□□ 2
ATXN3-253ENST00000621269 RNPEPQ9H4A4 650 aa27.55■■■□□ 2
ATXN3-253ENST00000621269 PCDHA6Q9UN73 950 aa27.55■■■□□ 2
ATXN3-253ENST00000621269 PCDHA8Q9Y5H6 950 aa27.55■■■□□ 2
ATXN3-253ENST00000621269 RSPH10B2B2RC85 870 aa27.54■■■□□ 2
ATXN3-253ENST00000621269 EFCAB14O75071 495 aa27.54■■■□□ 2
ATXN3-253ENST00000621269 RSPH10BP0C881 870 aa27.54■■■□□ 2
ATXN3-253ENST00000621269 FGD1P98174 961 aa27.54■■■□□ 2
ATXN3-253ENST00000621269 TRAF7Q6Q0C0 670 aa27.54■■■□□ 2
ATXN3-253ENST00000621269 EMSYQ7Z589 1322 aa27.54■■■□□ 2
ATXN3-253ENST00000621269 BRPF3Q9ULD4 1205 aa27.54■■■□□ 2
ATXN3-253ENST00000621269 TRIP12Q14669 1992 aaPredicted RBP27.53■■■□□ 2
ATXN3-253ENST00000621269 CNTNAP5Q8WYK1 1306 aa27.53■■■□□ 2
ATXN3-253ENST00000621269 TREHO43280 583 aa27.53■■■□□ 2
ATXN3-253ENST00000621269 HOXC8P31273 242 aa27.53■■■□□ 2
ATXN3-253ENST00000621269 MTMR1Q13613 665 aa27.53■■■□□ 2
ATXN3-253ENST00000621269 CERS4Q9HA82 394 aa27.53■■■□□ 2
ATXN3-253ENST00000621269 PRUNE2Q8WUY3 3088 aa27.53■■■□□ 2
ATXN3-253ENST00000621269 KLF18A0A0U1RQI7 1052 aa27.52■■■□□ 2
ATXN3-253ENST00000621269 GOLGA8AA7E2F4 631 aa27.52■■■□□ 2
ATXN3-253ENST00000621269 GOLGA8BA8MQT2 603 aa27.52■■■□□ 2
ATXN3-253ENST00000621269 LGR5O75473 907 aa27.52■■■□□ 2
ATXN3-253ENST00000621269 ITGB5P18084 799 aa27.52■■■□□ 2
ATXN3-253ENST00000621269 NAPAP54920 295 aa27.52■■■□□ 2
ATXN3-253ENST00000621269 WWC2Q6AWC2 1192 aa27.52■■■□□ 2
ATXN3-253ENST00000621269 TRIM50Q86XT4 487 aa27.52■■■□□ 2
ATXN3-253ENST00000621269 SYMPKQ92797 1274 aaKnown RBP27.52■■■□□ 2
ATXN3-253ENST00000621269 SETD4Q9NVD3 440 aa27.52■■■□□ 2
ATXN3-253ENST00000621269 NAP1L2Q9ULW6 460 aaPredicted RBP27.52■■■□□ 2
ATXN3-253ENST00000621269 TELO2Q9Y4R8 837 aa27.52■■■□□ 2
ATXN3-253ENST00000621269 UBIAD1Q9Y5Z9 338 aa27.52■■■□□ 2
ATXN3-253ENST00000621269 V9GY48 417 aaPredicted RBP27.52■■■□□ 2
ATXN3-253ENST00000621269 MAFGO15525 162 aa27.51■■□□□ 1.99
ATXN3-253ENST00000621269 ATP9AO75110 1047 aa27.51■■□□□ 1.99
ATXN3-253ENST00000621269 DEFB103AP81534 67 aa27.51■■□□□ 1.99
ATXN3-253ENST00000621269 TAP1Q03518 808 aa27.51■■□□□ 1.99
ATXN3-253ENST00000621269 MBTPS1Q14703 1052 aa27.51■■□□□ 1.99
ATXN3-253ENST00000621269 PRDM6Q9NQX0 595 aa27.51■■□□□ 1.99
ATXN3-253ENST00000621269 KCNA2P16389 499 aa27.5■■□□□ 1.99
ATXN3-253ENST00000621269 TCF7P36402 384 aaPredicted RBP27.5■■□□□ 1.99
ATXN3-253ENST00000621269 TCTN1Q2MV58 587 aa27.5■■□□□ 1.99
ATXN3-253ENST00000621269 PPP1R18Q6NYC8 613 aa27.5■■□□□ 1.99
ATXN3-253ENST00000621269 TMCO2Q7Z6W1 182 aaPredicted RBP27.5■■□□□ 1.99
ATXN3-253ENST00000621269 TEX2Q8IWB9 1127 aa27.5■■□□□ 1.99
ATXN3-253ENST00000621269 MICALL1Q8N3F8 863 aa27.5■■□□□ 1.99
ATXN3-253ENST00000621269 ARNTL2Q8WYA1 636 aa27.5■■□□□ 1.99
ATXN3-253ENST00000621269 SEPT1Q8WYJ6 367 aa27.5■■□□□ 1.99
ATXN3-253ENST00000621269 RIC8AQ9NPQ8 531 aa27.5■■□□□ 1.99
ATXN3-253ENST00000621269 JADE2Q9NQC1 790 aa27.5■■□□□ 1.99
ATXN3-253ENST00000621269 PKD2L1Q9P0L9 805 aa27.5■■□□□ 1.99
ATXN3-253ENST00000621269 hCG_1984214I3L0E3 225 aa27.49■■□□□ 1.99
ATXN3-253ENST00000621269 GTPBP6O43824 516 aaPredicted RBP27.49■■□□□ 1.99
ATXN3-253ENST00000621269 CAND2O75155 1236 aa27.49■■□□□ 1.99
ATXN3-253ENST00000621269 ARHGAP4P98171 946 aa27.49■■□□□ 1.99
ATXN3-253ENST00000621269 ZNF713Q8N859 430 aaPredicted RBP27.49■■□□□ 1.99
ATXN3-253ENST00000621269 TSPYL2Q9H2G4 693 aaPredicted RBP27.49■■□□□ 1.99
ATXN3-253ENST00000621269 NRCAMQ92823 1304 aa27.48■■□□□ 1.99
ATXN3-253ENST00000621269 RFXAPO00287 272 aa27.48■■□□□ 1.99
ATXN3-253ENST00000621269 FOSP01100 380 aaPredicted RBP27.48■■□□□ 1.99
ATXN3-253ENST00000621269 ADCY7P51828 1080 aa27.48■■□□□ 1.99
ATXN3-253ENST00000621269 RCAN1P53805 252 aa27.48■■□□□ 1.99
ATXN3-253ENST00000621269 FUT2Q10981 343 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms