RNA–Protein interactions for RNA: ENST00000621093.4

POLR2J3-221, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene POLR2J3, Length 348 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-221ENST00000621093 TRAPPC10P48553 1259 aa12.38□□□□□ -0.43
POLR2J3-221ENST00000621093 SETQ01105 290 aaPredicted RBP12.38□□□□□ -0.43
POLR2J3-221ENST00000621093 CEBPZQ03701 1054 aaKnown RBP12.38□□□□□ -0.43
POLR2J3-221ENST00000621093 RILPL1Q5EBL4 403 aa12.38□□□□□ -0.43
POLR2J3-221ENST00000621093 KCNV1Q6PIU1 500 aa12.38□□□□□ -0.43
POLR2J3-221ENST00000621093 C4orf32Q8N8J7 132 aa12.38□□□□□ -0.43
POLR2J3-221ENST00000621093 AFG1LQ8WV93 481 aa12.38□□□□□ -0.43
POLR2J3-221ENST00000621093 SLC5A5Q92911 643 aa12.38□□□□□ -0.43
POLR2J3-221ENST00000621093 CDHR1Q96JP9 859 aa12.38□□□□□ -0.43
POLR2J3-221ENST00000621093 NAP1L4Q99733 375 aaKnown RBP12.38□□□□□ -0.43
POLR2J3-221ENST00000621093 UPF3AQ9H1J1 476 aaKnown RBP12.38□□□□□ -0.43
POLR2J3-221ENST00000621093 KCNMB3Q9NPA1 279 aa12.38□□□□□ -0.43
POLR2J3-221ENST00000621093 TFIP11Q9UBB9 837 aaKnown RBP12.38□□□□□ -0.43
POLR2J3-221ENST00000621093 NKRFO15226 690 aaKnown RBP eCLIP12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 MAFGO15525 162 aa12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 PSMD10O75832 226 aa12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 SGPL1O95470 568 aa12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 CCNE2O96020 404 aa12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 GJB1P08034 283 aa12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 C6orf222P0C671 652 aaPredicted RBP12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 GJA9P57773 515 aa12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 PTGDRQ13258 359 aa12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 NEDD9Q14511 834 aa12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 SF3A1Q15459 793 aaKnown RBP12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 CALCRLQ16602 461 aa12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 HSDL1Q3SXM5 330 aa12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 TNS4Q8IZW8 715 aa12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 U2AF1L4Q8WU68 220 aaKnown RBP12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 MTMR9Q96QG7 549 aa12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 USP28Q96RU2 1077 aa12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 SENP7Q9BQF6 1050 aa12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 AP5M1Q9H0R1 490 aa12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 MLXIPQ9HAP2 919 aa12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 NFASCO94856 1347 aa12.37□□□□□ -0.43
POLR2J3-221ENST00000621093 GSTTP1A0A1W2PQM5 241 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 CHMP2AO43633 222 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 MSCO60682 206 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 TFRCP02786 760 aaKnown RBP12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 MMP3P08254 477 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 PDIA4P13667 645 aaKnown RBP12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 TXKP42681 527 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 NUCB2P80303 420 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 DNM1Q05193 864 aaKnown RBP12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 LRRC41Q15345 812 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 IL17AQ16552 155 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 LRCH2Q5VUJ6 765 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 METTL7BQ6UX53 244 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 KLHDC9Q8NEP7 349 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 SPATA33Q96N06 139 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 SDF4Q9BRK5 362 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 TMEM106CQ9BVX2 250 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 CRISPLD2Q9H0B8 497 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 UNC45AQ9H3U1 944 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 SLC9A2Q9UBY0 812 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 OGDHLQ9ULD0 1010 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 Q9Y3F1 56 aa12.36□□□□□ -0.43
POLR2J3-221ENST00000621093 ALPK3Q96L96 1907 aa12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 EML1O00423 815 aa12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 TBX3O15119 743 aa12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 MARCH6O60337 910 aa12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 GAS7O60861 476 aa12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 OR52Z1P0C646 297 aa12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 EN2P19622 333 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 GJA8P48165 433 aa12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 MNX1P50219 401 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 ACTR2P61160 394 aa12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 LAMC2Q13753 1193 aa12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 PTPAQ15257 358 aa12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 KCNA10Q16322 511 aa12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 FSCN1Q16658 493 aaKnown RBP12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 CCSAPQ6IQ19 270 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 PPP1R13LQ8WUF5 828 aa12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 EMID1Q96A84 441 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 GPR20Q99678 358 aa12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 TEKT3Q9BXF9 490 aa12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 JPH1Q9HDC5 661 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 TBC1D22BQ9NU19 505 aa12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 VAV3Q9UKW4 847 aa12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 TRIP12Q14669 1992 aaPredicted RBP12.35□□□□□ -0.43
POLR2J3-221ENST00000621093 ARID2Q68CP9 1835 aa12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 KIAA0100Q14667 2235 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 KAT6AQ92794 2004 aa12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 A6NJR5 290 aa12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 CCDC85CA6NKD9 419 aa12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 BAG4O95429 457 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 MYL3P08590 195 aa12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 ZNF286BP0CG31 522 aa12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 TECP42680 631 aa12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 SOX10P56693 466 aa12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 NKX3-2P78367 333 aa12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 ATP2C1P98194 919 aaPredicted RBP12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 GRIN1Q05586 938 aa12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 ORC2Q13416 577 aaPredicted RBP12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 GNASQ5JWF2 1037 aa12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 UTP14CQ5TAP6 766 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 B3GNT9Q6UX72 402 aa12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 GIMAP8Q8ND71 665 aaPredicted RBP12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 PPTC7Q8NI37 304 aa12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 DIS3LQ8TF46 1054 aaKnown RBP12.34□□□□□ -0.43
POLR2J3-221ENST00000621093 FAM20AQ96MK3 541 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms