RNA–Protein interactions for RNA: ENST00000621013.4

SLC39A1-211, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SLC39A1, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-211ENST00000621013 SLF2Q8IX21 1173 aa19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 ZC3H3Q8IXZ2 948 aaKnown RBP19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 HAS1Q92839 578 aa19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 MS4A14Q96JA4 679 aa19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 LSM14BQ9BX40 385 aaKnown RBP19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 SLC26A4O43511 780 aa19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 PALMO75781 387 aa19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 TNNI2P48788 182 aa19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 NAP1L1P55209 391 aaKnown RBP19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 GNGT1P63211 74 aa19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 PAK2Q13177 524 aa19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 MEI1Q5TIA1 1274 aa19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 GPIHBP1Q8IV16 184 aa19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 ARL8AQ96BM9 186 aa19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 ZIM3Q96PE6 472 aa19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 NT5C3AQ9H0P0 336 aa19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 BMP2KQ9NSY1 1161 aaPredicted RBP19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 AIPL1Q9NZN9 384 aa19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 DDX25Q9UHL0 483 aaKnown RBP19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 PCDHA2Q9Y5H9 948 aa19.26■□□□□ 0.67
SLC39A1-211ENST00000621013 IGKV6D-41A0A0C4DH26 115 aa19.25■□□□□ 0.67
SLC39A1-211ENST00000621013 PNMA6FA0A0J9YX94 578 aa19.25■□□□□ 0.67
SLC39A1-211ENST00000621013 EBAG9O00559 213 aa19.25■□□□□ 0.67
SLC39A1-211ENST00000621013 GLI1P08151 1106 aa19.25■□□□□ 0.67
SLC39A1-211ENST00000621013 GCFC2P16383 781 aaKnown RBP19.25■□□□□ 0.67
SLC39A1-211ENST00000621013 POLR2FP61218 127 aaKnown RBP19.25■□□□□ 0.67
SLC39A1-211ENST00000621013 IQCKQ8N0W5 287 aa19.25■□□□□ 0.67
SLC39A1-211ENST00000621013 C10orf71Q711Q0 1435 aa19.25■□□□□ 0.67
SLC39A1-211ENST00000621013 VGLL3A8MV65 326 aa19.25■□□□□ 0.67
SLC39A1-211ENST00000621013 ERCC3P19447 782 aa19.25■□□□□ 0.67
SLC39A1-211ENST00000621013 CCT5P48643 541 aa19.25■□□□□ 0.67
SLC39A1-211ENST00000621013 PACS2Q86VP3 889 aa19.25■□□□□ 0.67
SLC39A1-211ENST00000621013 CD302Q8IX05 232 aa19.25■□□□□ 0.67
SLC39A1-211ENST00000621013 INPP4AQ96PE3 977 aaPredicted RBP19.25■□□□□ 0.67
SLC39A1-211ENST00000621013 RTCBQ9Y3I0 505 aaKnown RBP19.25■□□□□ 0.67
SLC39A1-211ENST00000621013 ATAD5Q96QE3 1844 aa19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 SHTN1A0MZ66 631 aa19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 BTNL10A8MVZ5 291 aa19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 CES2O00748 559 aa19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 HEXIM1O94992 359 aaKnown RBP19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 KLRC1P26715 233 aa19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 EMC10Q5UCC4 262 aa19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 TMC4Q7Z404 712 aa19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 TADA2BQ86TJ2 420 aa19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 CCDC65Q8IXS2 484 aa19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 BCAS4Q8TDM0 211 aa19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 GPR101Q96P66 508 aaPredicted RBP19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 NAP1L4Q99733 375 aaKnown RBP19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 CARSP49589 748 aaKnown RBP19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 C1orf131Q8NDD1 294 aaKnown RBP19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 TBC1D5Q92609 795 aa19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 ARHGEF1Q92888 912 aaKnown RBP19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 JMJD4Q9H9V9 463 aa19.24■□□□□ 0.67
SLC39A1-211ENST00000621013 GPSM2P81274 684 aa19.23■□□□□ 0.67
SLC39A1-211ENST00000621013 GABPAQ06546 454 aa19.23■□□□□ 0.67
SLC39A1-211ENST00000621013 GANQ9H2C0 597 aa19.23■□□□□ 0.67
SLC39A1-211ENST00000621013 KCTD10Q9H3F6 313 aa19.23■□□□□ 0.67
SLC39A1-211ENST00000621013 EPB41L5Q9HCM4 733 aa19.23■□□□□ 0.67
SLC39A1-211ENST00000621013 ANKRD65E5RJM6 399 aa19.23■□□□□ 0.67
SLC39A1-211ENST00000621013 ATP2B4P23634 1241 aa19.23■□□□□ 0.67
SLC39A1-211ENST00000621013 ZNF543Q08ER8 600 aa19.23■□□□□ 0.67
SLC39A1-211ENST00000621013 CDC37Q16543 378 aaPredicted RBP19.23■□□□□ 0.67
SLC39A1-211ENST00000621013 CFAP58Q5T655 872 aa19.23■□□□□ 0.67
SLC39A1-211ENST00000621013 PPP4R3CPQ6ZMV5 832 aa19.23■□□□□ 0.67
SLC39A1-211ENST00000621013 LRRC47Q8N1G4 583 aaKnown RBP19.23■□□□□ 0.67
SLC39A1-211ENST00000621013 WHAMMQ8TF30 809 aa19.23■□□□□ 0.67
SLC39A1-211ENST00000621013 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.23■□□□□ 0.67
SLC39A1-211ENST00000621013 CUL5Q93034 780 aa19.23■□□□□ 0.67
SLC39A1-211ENST00000621013 NFU1Q9UMS0 254 aa19.23■□□□□ 0.67
SLC39A1-211ENST00000621013 PCDHA12Q9UN75 941 aa19.23■□□□□ 0.67
SLC39A1-211ENST00000621013 FOCADQ5VW36 1801 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 PPP1R11O60927 126 aaPredicted RBP19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 FTCDO95954 541 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 MRPL12P52815 198 aaKnown RBP19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 GUCY2DQ02846 1103 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 UBE2SQ16763 222 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 EDRF1Q3B7T1 1238 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 C10orf76Q5T2E6 689 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 EIF1ADQ8N9N8 165 aaKnown RBP19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 CCDC43Q96MW1 224 aaKnown RBP19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 FGFBP2Q9BYJ0 223 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 EHD4Q9H223 541 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 A0A087X0T9 212 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 FAM228BP0C875 321 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 MYBP10242 640 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 KLHL30Q0D2K2 578 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 RAPGEF1Q13905 1077 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 ASIC2Q16515 512 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 KDM7AQ6ZMT4 941 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 ADGRF4Q8IZF3 695 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 TBC1D22AQ8WUA7 517 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 SCFD1Q8WVM8 642 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 GPCPD1Q9NPB8 672 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 SWAP70Q9UH65 585 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 TMEM59LQ9UK28 342 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 FAM169AQ9Y6X4 670 aa19.22■□□□□ 0.67
SLC39A1-211ENST00000621013 ATXN2Q99700 1313 aaKnown RBP19.21■□□□□ 0.67
SLC39A1-211ENST00000621013 FRMD3A2A2Y4 597 aa19.21■□□□□ 0.67
SLC39A1-211ENST00000621013 ZNF233A6NK53 670 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms